BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042618
         (493 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...    87   3e-15
gb|EEE96313.2| hypothetical protein POPTR_0012s09200g [Populus t...    76   5e-12
gb|EEF05776.2| RNA-binding family protein [Populus trichocarpa]        67   2e-09
ref|XP_002318093.1| predicted protein [Populus trichocarpa]            67   2e-09
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    64   2e-08
ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    63   4e-08
gb|AFK47384.1| unknown [Lotus japonicus]                               62   9e-08
ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    60   4e-07
gb|ACU18482.1| unknown [Glycine max]                                   60   4e-07
gb|EOY22297.1| 31-kDa RNA binding protein [Theobroma cacao]            59   5e-07
gb|ESW27493.1| hypothetical protein PHAVU_003G206700g [Phaseolus...    58   1e-06
gb|EMJ10610.1| hypothetical protein PRUPE_ppa009286mg [Prunus pe...    58   1e-06
ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like...    57   2e-06
gb|ACF22879.1| RNA-binding protein [Glycine max]                       57   2e-06
emb|CBI34828.3| unnamed protein product [Vitis vinifera]               55   7e-06

>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223550401|gb|EEF51888.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 319

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/108 (48%), Positives = 57/108 (52%)
 Frame = +2

Query: 92  TFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXXTHFSSL 271
           TFKPLSMADSCLLSLPSIFT+K PY  LS+P R                     THFSSL
Sbjct: 3   TFKPLSMADSCLLSLPSIFTSKPPYLSLSVPSR----PPIKLHITQSYSSLKSKTHFSSL 58

Query: 272 IPFVAQTSDWAQQGXXXXXXXXXXXXXXXXXXXXNQESDGAEARVSDW 415
           +P VAQTSDWAQQ                       E++  EARVSDW
Sbjct: 59  VPLVAQTSDWAQQEENDATVTLAESEQEQEWEGQESETE-TEARVSDW 105


>gb|EEE96313.2| hypothetical protein POPTR_0012s09200g [Populus trichocarpa]
          Length = 382

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 58/153 (37%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
 Frame = +2

Query: 2   HSLSLQSAPYPQ----PSYKPPL-LLP-------KMSATASPTFKPLSMADSCLLSLPSI 145
           H   L SA YPQ    P +  PL  LP       KMSA ++ TFKPL MA++CL SLPS 
Sbjct: 21  HIAYLLSASYPQTPLNPLHSSPLPALPSSLYFSLKMSAASAFTFKPLLMAETCLCSLPST 80

Query: 146 FTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXXTHFSSLIPFVAQTSDWAQQG---X 316
           F +K P + L I  R                     TH S  IPFV QTSDWAQQG    
Sbjct: 81  FASKPPLKSLPISQR-PSKLQLSYSHSLSPFSLKPKTHLSLTIPFVTQTSDWAQQGEEDN 139

Query: 317 XXXXXXXXXXXXXXXXXXXNQESDGAEARVSDW 415
                              N+ES+  E +VS+W
Sbjct: 140 TTITLTESEQEEQGESNWVNEESNDFEGKVSEW 172


>gb|EEF05776.2| RNA-binding family protein [Populus trichocarpa]
          Length = 308

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           MSATA+ T KPL MA++C+ S PSIFT+K P + L I  R                    
Sbjct: 1   MSATAASTLKPLLMAETCICSFPSIFTSKPPLKPLPISHR-PIKLQLSYSHSLSTLSVKP 59

Query: 251 XTHFSSLIPFVAQTSDWAQQ 310
            TH S  IPFVAQTSDWAQQ
Sbjct: 60  KTHLSLTIPFVAQTSDWAQQ 79


>ref|XP_002318093.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/118 (37%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           MSA ++ TFKPL MA++CL SLPS F +K P + L I  R                    
Sbjct: 1   MSAASAFTFKPLLMAETCLCSLPSTFASKPPLKSLPISQR-PSKLQLSYSHSLSPFSLKP 59

Query: 251 XTHFSSLIPFVAQTSDWAQQG---XXXXXXXXXXXXXXXXXXXXNQESDGAEARVSDW 415
            TH S  IPFV QTSDWAQQG                       N+ES+  E +V +W
Sbjct: 60  KTHLSLTIPFVTQTSDWAQQGEEDNTTITLTESEQEEQGESNWVNEESNDFEGKVPEW 117


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +2

Query: 77  ATASPTFKPLSMADSCLLSLPS-IFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXX 253
           A+++   KP SMA+SCL S+P+ +FT K P+  LS+PP+                     
Sbjct: 2   ASSNALLKPFSMAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTK 61

Query: 254 THFSSLIPFVAQTSDWAQQ 310
           T  ++L+PFVAQTSDWAQQ
Sbjct: 62  TSPTTLVPFVAQTSDWAQQ 80


>ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 292

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +2

Query: 71  MSATASPTFKPLSM-ADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXX 247
           M++  S  FK LS+ ADSC LSLP +F++K P   LSIP R                   
Sbjct: 1   MTSATSHLFKTLSITADSCALSLPHLFSSKTPNAFLSIPTRPTTTAKLHLSHSFAPLRSK 60

Query: 248 XXTHFSSLIPFVAQTSDWAQQ 310
             THFSSL+ +VAQTSDWAQQ
Sbjct: 61  --THFSSLVSYVAQTSDWAQQ 79


>gb|AFK47384.1| unknown [Lotus japonicus]
          Length = 307

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           MS T  P FK L++A+SCLLS PS+F++K  Y  LS   +                    
Sbjct: 1   MSITTMPAFKFLTVAESCLLSQPSLFSSKTRYPILSNSLKTLKLQLPCSNSSPFSPSLLS 60

Query: 251 XTHFSSLIPFVAQTSDWAQQ 310
            TH S L+ FVAQTSDWAQQ
Sbjct: 61  TTHRSPLLTFVAQTSDWAQQ 80


>ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 299

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/80 (45%), Positives = 43/80 (53%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           MS T    FK L+MA+SCLLSLPS+F AK     LSIP +                    
Sbjct: 4   MSLTTVAAFKSLTMAESCLLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSLFPLTTKT 63

Query: 251 XTHFSSLIPFVAQTSDWAQQ 310
             H SSL+ FVAQTSDWA++
Sbjct: 64  TRH-SSLLTFVAQTSDWAKE 82


>gb|ACU18482.1| unknown [Glycine max]
          Length = 280

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/80 (45%), Positives = 43/80 (53%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           MS T    FK L+MA+SCLLSLPS+F AK     LSIP +                    
Sbjct: 4   MSLTTVAAFKSLTMAESCLLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSLFPLTTKT 63

Query: 251 XTHFSSLIPFVAQTSDWAQQ 310
             H SSL+ FVAQTSDWA++
Sbjct: 64  TRH-SSLLTFVAQTSDWAKE 82


>gb|EOY22297.1| 31-kDa RNA binding protein [Theobroma cacao]
          Length = 329

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 44/122 (36%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
 Frame = +2

Query: 86  SPTFKPLSMADS-CLLSLPSIF-TAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXXTH 259
           S   KP+S+ADS CL SL S+F T+ +    LS+PP+                     TH
Sbjct: 2   SAVTKPISLADSSCLASLASLFSTSSKAPSLLSLPPKSIKLFLSSSRSPSLSALRTK-TH 60

Query: 260 FSSLIPFVAQTSDWAQQ----------GXXXXXXXXXXXXXXXXXXXXNQESDGAEARVS 409
           F SL+  VAQTSDWAQQ                               N+ESDGAEA +S
Sbjct: 61  FPSLVALVAQTSDWAQQEEENDTTITIDGQEQQVQEETESEEGESTWENEESDGAEANLS 120

Query: 410 DW 415
           DW
Sbjct: 121 DW 122


>gb|ESW27493.1| hypothetical protein PHAVU_003G206700g [Phaseolus vulgaris]
          Length = 305

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = +2

Query: 74  SATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXX 253
           S T +P+F  L+MA+SC+LSLPS+F A      LSIP +                     
Sbjct: 6   SLTTTPSFNTLTMAESCILSLPSLFRANTKTLSLSIPSK-RLNLQLPSSNSSLFPLTTNT 64

Query: 254 THFSSLIPFVAQTSDWAQQ 310
           T F SL+ FVAQTSDWA++
Sbjct: 65  TRFPSLLTFVAQTSDWAKE 83


>gb|EMJ10610.1| hypothetical protein PRUPE_ppa009286mg [Prunus persica]
          Length = 298

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIP--PRXXXXXXXXXXXXXXXXXX 244
           M++  S  FK LS+ADSCL+SLP + + K     LSIP  P                   
Sbjct: 1   MASATSNLFKTLSIADSCLVSLPYLSSTKTANSFLSIPSKPIKLHLTYTHASHFSPPLSL 60

Query: 245 XXXTHFSSLIPFVAQTSDWAQQ 310
              T FSS++ FVAQTSDWAQQ
Sbjct: 61  KNKTQFSSIVSFVAQTSDWAQQ 82


>ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
           gi|255645622|gb|ACU23305.1| unknown [Glycine max]
          Length = 300

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/81 (41%), Positives = 42/81 (51%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           +S +  P F  L+MA+SCLLSLPS+F AK     LSIP                      
Sbjct: 3   LSLSTVPAFNSLTMAESCLLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSLFPLTTKT 62

Query: 251 XTHFSSLIPFVAQTSDWAQQG 313
             H SSL+ FVAQTS WA++G
Sbjct: 63  TRH-SSLLTFVAQTSGWAKEG 82


>gb|ACF22879.1| RNA-binding protein [Glycine max]
          Length = 302

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/81 (41%), Positives = 42/81 (51%)
 Frame = +2

Query: 71  MSATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXX 250
           +S +  P F  L+MA+SCLLSLPS+F AK     LSIP                      
Sbjct: 5   LSLSTVPAFNSLTMAESCLLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSLFPLTTKT 64

Query: 251 XTHFSSLIPFVAQTSDWAQQG 313
             H SSL+ FVAQTS WA++G
Sbjct: 65  TRH-SSLLTFVAQTSGWAKEG 84


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +2

Query: 110 MADSCLLSLPS-IFTAKRPYQCLSIPPRXXXXXXXXXXXXXXXXXXXXXTHFSSLIPFVA 286
           MA+SCL S+P+ +FT K P+  LS+PP+                     T  ++L+PFVA
Sbjct: 1   MAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVA 60

Query: 287 QTSDWAQQ 310
           QTSDWAQQ
Sbjct: 61  QTSDWAQQ 68