BLASTX nr result
ID: Jatropha_contig00042577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00042577
(269 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE91126.2| hypothetical protein POPTR_0007s08110g [Populus t... 73 4e-11
ref|XP_002310676.1| predicted protein [Populus trichocarpa] 73 4e-11
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,... 70 2e-10
ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_004298524.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|EMJ08308.1| hypothetical protein PRUPE_ppa019799mg [Prunus pe... 67 2e-09
ref|XP_004296005.1| PREDICTED: putative pentatricopeptide repeat... 66 5e-09
ref|XP_004295771.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_004295770.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_004295762.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat... 66 5e-09
gb|EMJ09827.1| hypothetical protein PRUPE_ppa018780mg, partial [... 66 5e-09
ref|XP_006287556.1| hypothetical protein CARUB_v10000768mg [Caps... 64 1e-08
ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_004301042.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
gb|EEE95863.2| hypothetical protein POPTR_0013s14640g [Populus t... 63 4e-08
ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_002319940.1| predicted protein [Populus trichocarpa] 63 4e-08
ref|XP_004295937.1| PREDICTED: putative pentatricopeptide repeat... 62 7e-08
ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
>gb|EEE91126.2| hypothetical protein POPTR_0007s08110g [Populus trichocarpa]
Length = 424
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 18/106 (16%)
Frame = +1
Query: 1 GIPYNINFVNILLHCFWCLDRVDFGYPFIGKVFKPGFQPEML---------------DCV 135
GI YN+ ++IL++CF L VD+G+ GK K GF+P+++ +
Sbjct: 70 GIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELA 129
Query: 136 VKLVIQRGIK---PDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
L+ + G+ PDV+T +SLM GYC ++D+ R+IF LMVS G
Sbjct: 130 AGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG 175
>ref|XP_002310676.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 18/106 (16%)
Frame = +1
Query: 1 GIPYNINFVNILLHCFWCLDRVDFGYPFIGKVFKPGFQPEML---------------DCV 135
GI YN+ ++IL++CF L VD+G+ GK K GF+P+++ +
Sbjct: 70 GIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELA 129
Query: 136 VKLVIQRGIK---PDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
L+ + G+ PDV+T +SLM GYC ++D+ R+IF LMVS G
Sbjct: 130 AGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG 175
>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 594
Score = 70.5 bits (171), Expect = 2e-10
Identities = 26/44 (59%), Positives = 42/44 (95%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
++ L+I+RG++P+V+TY+SLMDGYCLH+Q+D+AR++FD+MV+ G
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449
>ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 439
Score = 67.8 bits (164), Expect = 1e-09
Identities = 28/44 (63%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+PD ITY+SLMDGYCL ++D+A+++FDL+VS G
Sbjct: 318 VVQIMIQRGIEPDTITYNSLMDGYCLRGEMDKAKQVFDLIVSKG 361
>ref|XP_004298524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 605
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/44 (63%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+PD ITYSSLMDG+CL ++D+A+++FDLMV+ G
Sbjct: 318 VVQIMIQRGIEPDTITYSSLMDGHCLRGEMDKAKQVFDLMVTKG 361
>gb|EMJ08308.1| hypothetical protein PRUPE_ppa019799mg [Prunus persica]
Length = 493
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/44 (61%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+PD +TYSSLMDGYCL ++D+A+++F+LM+S G
Sbjct: 208 VVEMMIQRGIEPDTVTYSSLMDGYCLRGEMDKAQQVFELMLSKG 251
>ref|XP_004296005.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 702
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/44 (59%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+P+ +TYSSLMDGYC+ ++D+A+E+FDLM++ G
Sbjct: 417 VVQMMIQRGIEPNTVTYSSLMDGYCMLGEMDKAKEVFDLMINKG 460
>ref|XP_004295771.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 859
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/44 (61%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+P+ ITYSSLMDG+CL ++D+A+++FDLMV+ G
Sbjct: 553 VVQIMIQRGIEPNTITYSSLMDGHCLRGEMDEAKQVFDLMVAKG 596
>ref|XP_004295770.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 459
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/44 (61%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+P+ ITYSSLMDG+CL ++D+A+++FDLMV+ G
Sbjct: 318 VVQIMIQRGIEPNTITYSSLMDGHCLRGEMDEAKQVFDLMVAKG 361
>ref|XP_004295762.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 287
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/46 (58%), Positives = 41/46 (89%)
Frame = +1
Query: 127 DCVVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
+ VV+++IQRGI+P+ ITY+SLMDG+CL ++D+A+++FDLMVS G
Sbjct: 30 ESVVQIMIQRGIEPNTITYNSLMDGHCLQGEMDKAKQVFDLMVSKG 75
>ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 690
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/44 (61%), Positives = 40/44 (90%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQRGI+P+ ITYSSLMDG+CL ++D+A+++FDLMV+ G
Sbjct: 208 VVQIMIQRGIEPNTITYSSLMDGHCLRGEMDEAKQVFDLMVAKG 251
>gb|EMJ09827.1| hypothetical protein PRUPE_ppa018780mg, partial [Prunus persica]
Length = 430
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = +1
Query: 127 DCVVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
D VV+++IQRGI+PD +TYSSLMDGYCL ++ +AR++F LM+S G
Sbjct: 194 DGVVEMMIQRGIEPDTVTYSSLMDGYCLRGEMSKARKVFKLMLSKG 239
>ref|XP_006287556.1| hypothetical protein CARUB_v10000768mg [Capsella rubella]
gi|482556262|gb|EOA20454.1| hypothetical protein
CARUB_v10000768mg [Capsella rubella]
Length = 506
Score = 64.3 bits (155), Expect = 1e-08
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Frame = +1
Query: 1 GIPYNINFVNILLHCFWCLDRVDFGYPFIGKVFKPGFQPEMLDC---------------- 132
GIP+N+ NILL+CF R FIGK+ K G +P ++
Sbjct: 113 GIPHNLYTCNILLNCFCQCSRFSLALSFIGKMMKLGHEPSIVTLGSLLNGFCRGDRIYDA 172
Query: 133 --VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
+ +++ G KP+V+ Y+S++DG C + QVD A E+ + M +G
Sbjct: 173 LYMFNRMVEMGYKPNVVIYNSIIDGLCKNKQVDNALELLNQMEKDG 218
>ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565354324|ref|XP_006344062.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum] gi|565354326|ref|XP_006344063.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X3 [Solanum
tuberosum] gi|565354328|ref|XP_006344064.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X4 [Solanum
tuberosum]
Length = 593
Score = 63.9 bits (154), Expect = 2e-08
Identities = 24/44 (54%), Positives = 38/44 (86%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
V+K ++++G++PD+ITY+++MDGYCL QVD+AR IFD+M+ G
Sbjct: 306 VMKHMVRKGVEPDIITYNAIMDGYCLRGQVDRARRIFDIMIDKG 349
>ref|XP_004301042.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 416
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/44 (56%), Positives = 39/44 (88%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV++++QRGI+P+ ITY+SLMDG+CL ++D+A+ +FDLMV+ G
Sbjct: 208 VVQIMVQRGIEPNTITYNSLMDGHCLRGEMDEAKRVFDLMVAKG 251
>gb|EEE95863.2| hypothetical protein POPTR_0013s14640g [Populus trichocarpa]
gi|550325857|gb|ERP54335.1| hypothetical protein
POPTR_0013s14640g [Populus trichocarpa]
Length = 558
Score = 62.8 bits (151), Expect = 4e-08
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +1
Query: 1 GIPYNINFVNILLHCFWCLDRVDFGYPFIGKVFKPGFQPEMLDCVVKLVIQRGIKPDVIT 180
GI +++ + IL++CF L VD+G+ +GK+ K G++P+VIT
Sbjct: 124 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIK-----------------LGLEPNVIT 166
Query: 181 YSSLMDGYCLHNQVDQAREIFDLMVSNGH 267
+S+L++G+C+ ++ +A E+FD+MV+ G+
Sbjct: 167 FSTLINGFCIEGKIGRAIELFDVMVARGY 195
>ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 701
Score = 62.8 bits (151), Expect = 4e-08
Identities = 25/44 (56%), Positives = 37/44 (84%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV++++QR I+PD +TYSSLMDGYC+ ++D AR++FD M+S G
Sbjct: 417 VVEMMMQRHIEPDTVTYSSLMDGYCMRGEMDHARQVFDHMISKG 460
>ref|XP_002319940.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 62.8 bits (151), Expect = 4e-08
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +1
Query: 1 GIPYNINFVNILLHCFWCLDRVDFGYPFIGKVFKPGFQPEMLDCVVKLVIQRGIKPDVIT 180
GI +++ + IL++CF L VD+G+ +GK+ K G++P+VIT
Sbjct: 121 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIK-----------------LGLEPNVIT 163
Query: 181 YSSLMDGYCLHNQVDQAREIFDLMVSNGH 267
+S+L++G+C+ ++ +A E+FD+MV+ G+
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGY 192
>ref|XP_004295937.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 709
Score = 62.0 bits (149), Expect = 7e-08
Identities = 25/44 (56%), Positives = 37/44 (84%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVSNG 264
VV+++IQR I+P ITY+SLMDGYC+ ++D+AR++FDLM+ G
Sbjct: 425 VVQMMIQRNIEPVTITYNSLMDGYCMRGEMDEARQVFDLMIRRG 468
>ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Fragaria vesca subsp. vesca]
Length = 677
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/42 (59%), Positives = 37/42 (88%)
Frame = +1
Query: 133 VVKLVIQRGIKPDVITYSSLMDGYCLHNQVDQAREIFDLMVS 258
VV+++IQRGI+PD YSSLM+GYC+ ++D+AR+IFDL++S
Sbjct: 375 VVQMMIQRGIQPDAFIYSSLMNGYCMQGEMDKARQIFDLLIS 416