BLASTX nr result

ID: Jatropha_contig00042473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042473
         (360 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ62129.1| acyl-CoA binding protein 3B [Vernicia fordii] gi|...    84   2e-14
ref|XP_002510117.1| acyl-CoA-binding protein, acbp, putative [Ri...    59   8e-07
ref|XP_002517510.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>gb|AFZ62129.1| acyl-CoA binding protein 3B [Vernicia fordii]
           gi|428754010|gb|AFZ62130.1| acyl-CoA binding protein 3B
           [Vernicia fordii]
          Length = 375

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/56 (78%), Positives = 48/56 (85%)
 Frame = +2

Query: 179 MELLQELFVTAFVAVVCSFLIAKIVSIAMAGGDSSNASRLSKSQNDDQKITGDDGD 346
           MELLQELFVTA  AVVCSFLIAK+VS+AMAG DSS+ S+ SKSQN DQKIT DD D
Sbjct: 1   MELLQELFVTAVFAVVCSFLIAKLVSMAMAGADSSHDSQFSKSQNVDQKITRDDDD 56


>ref|XP_002510117.1| acyl-CoA-binding protein, acbp, putative [Ricinus communis]
           gi|223550818|gb|EEF52304.1| acyl-CoA-binding protein,
           acbp, putative [Ricinus communis]
          Length = 343

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = +2

Query: 179 MELLQELFVTAFVAVVCSFLIAKIVSIAMAG-GDSSNASRLSKSQNDDQKITGD 337
           MELLQELFVT  VA++ SFLIAK+VS+  AG  DS+  S+L KSQN DQ+ T +
Sbjct: 1   MELLQELFVTVIVALLFSFLIAKLVSLGGAGDADSNQNSQLLKSQNTDQENTNE 54


>ref|XP_002517510.1| conserved hypothetical protein [Ricinus communis]
           gi|223543521|gb|EEF45052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +2

Query: 179 MELLQELFVTAFVAVVCSFLIAKIVSIAMAG-GDSSNASRLSKSQNDDQKITGD 337
           MELLQELFVT  VAV+ SFL AK+VS+  AG  DS+  S+L KSQN DQ+ T +
Sbjct: 1   MELLQELFVTVIVAVLFSFLTAKLVSLGGAGDADSNQNSQLLKSQNTDQENTNE 54


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