BLASTX nr result
ID: Jatropha_contig00042405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00042405
(467 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144313.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 91 2e-16
ref|XP_002308856.1| predicted protein [Populus trichocarpa] 90 3e-16
gb|EEE92379.2| zinc finger family protein [Populus trichocarpa] 88 1e-15
gb|ERP58758.1| hypothetical protein POPTR_0006s03070g [Populus t... 88 1e-15
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2... 88 1e-15
gb|ABK95425.1| unknown [Populus trichocarpa] 88 1e-15
gb|ESR43695.1| hypothetical protein CICLE_v10012279mg [Citrus cl... 84 2e-14
gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus pe... 83 4e-14
gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao] 80 3e-13
ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 3e-13
ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1... 80 3e-13
ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 72 7e-11
gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus... 70 3e-10
gb|ESQ44427.1| hypothetical protein EUTSA_v10006102mg [Eutrema s... 69 5e-10
ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 69 5e-10
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 68 1e-09
gb|ACU24187.1| unknown [Glycine max] 68 1e-09
ref|XP_002879893.1| ring-H2 finger C1A [Arabidopsis lyrata subsp... 67 2e-09
ref|XP_006291489.1| hypothetical protein CARUB_v10017638mg [Caps... 67 2e-09
ref|XP_002876373.1| hypothetical protein ARALYDRAFT_324170 [Arab... 67 2e-09
>ref|XP_004144313.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus] gi|449453135|ref|XP_004144314.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Cucumis sativus]
gi|449488265|ref|XP_004157985.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
sativus] gi|449488269|ref|XP_004157986.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
sativus]
Length = 299
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MS+GR+THWCY C RSVR RGRDAVCP C+GGF+QELD++ P +PF+FFGL
Sbjct: 1 MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGL 51
>ref|XP_002308856.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +3
Query: 270 RMSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
RMSS R+THWCYSC R VR RGRDA CPYCSGGFVQELD++ +P +FFG+
Sbjct: 3 RMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGM 54
>gb|EEE92379.2| zinc finger family protein [Populus trichocarpa]
Length = 308
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSS R+THWCYSC R VR RGRDA CPYCSGGFVQELD++ +P +FFG+
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGM 51
>gb|ERP58758.1| hypothetical protein POPTR_0006s03070g [Populus trichocarpa]
Length = 264
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSS R+THWCYSC R VR RGRDA CPYCSGGFVQELD++ +P +FFG+
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGM 51
>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
zinc finger family protein [Populus trichocarpa]
Length = 308
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSS R+THWCYSC R VR RGRD+ CPYCSGGFVQELD++ SP +FFG+
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGM 51
>gb|ABK95425.1| unknown [Populus trichocarpa]
Length = 264
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSS R+THWCYSC R VR RGRDA CPYCSGGFVQELD++ +P +FFG+
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGM 51
>gb|ESR43695.1| hypothetical protein CICLE_v10012279mg [Citrus clementina]
gi|557532513|gb|ESR43696.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|557532514|gb|ESR43697.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
Length = 309
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSSGR+THWCY C R VR +G DAVC YCSGGFVQELD++ SP +FFGL
Sbjct: 1 MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGL 51
>gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus persica]
Length = 321
Score = 82.8 bits (203), Expect = 4e-14
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSSGR+THWCY+C R VR +GRDAVCP C GGF+QEL+++ SP +FFGL
Sbjct: 1 MSSGRNTHWCYNCRRPVRLQGRDAVCPSCDGGFIQELNDMVHVSPLDFFGL 51
>gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao]
Length = 312
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MS+GR+THWCY C R V +GRDAVC YC GGFVQELD++ SP +FFGL
Sbjct: 1 MSTGRNTHWCYRCRRPVLLQGRDAVCCYCRGGFVQELDDMVHISPLDFFGL 51
>ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470110209|ref|XP_004291378.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470110211|ref|XP_004291379.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 308
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFG 422
MSSGR+THWCY C R R +GRDAVC CSGGFVQELD++ SP +FFG
Sbjct: 1 MSSGRNTHWCYRCRRPTRLQGRDAVCQNCSGGFVQELDDMVHISPLDFFG 50
>ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 269
Score = 79.7 bits (195), Expect = 3e-13
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MSSG +THWCY C R VR RGRDAVCP C+GGF+QEL+++ SP +F GL
Sbjct: 1 MSSGGNTHWCYRCRRPVRLRGRDAVCPNCNGGFIQELNDMVSISPIDFLGL 51
>ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 336
Score = 72.0 bits (175), Expect = 7e-11
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFG 422
MS+G +THWCY C R VR +GRD VC YC GGF+QEL++LE P F G
Sbjct: 1 MSTGGNTHWCYQCRRRVRLQGRDTVCSYCYGGFIQELNDLEGLVPEAFLG 50
>gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018690|gb|ESW17494.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018691|gb|ESW17495.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018692|gb|ESW17496.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
Length = 308
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MS+ R+THWCYSC R VR RDAVCP C+ GFV EL+++ +PF+ FG+
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFGM 51
>gb|ESQ44427.1| hypothetical protein EUTSA_v10006102mg [Eutrema salsugineum]
Length = 323
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFE 413
MSSGR+THWC+ C R V RGRD+ CPYC GGFV+E+D + P PF+
Sbjct: 1 MSSGRNTHWCHRCQRGVWLRGRDSTCPYCGGGFVEEID-VAPNIPFD 46
>ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING1-like [Glycine max]
Length = 335
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFF 419
MSSG THWC++C + V GRDAVCPYC GGFVQELDELE +P F
Sbjct: 1 MSSGA-THWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTF 48
>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max] gi|356577674|ref|XP_003556949.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Glycine max]
Length = 309
Score = 67.8 bits (164), Expect = 1e-09
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MS+ R+THWCYSC R VR RD VCP C+ GFV EL+++ +PF+ FG+
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGM 51
>gb|ACU24187.1| unknown [Glycine max]
Length = 309
Score = 67.8 bits (164), Expect = 1e-09
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFFGL 425
MS+ R+THWCYSC R VR RD VCP C+ GFV EL+++ +PF+ FG+
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGM 51
>ref|XP_002879893.1| ring-H2 finger C1A [Arabidopsis lyrata subsp. lyrata]
gi|297325732|gb|EFH56152.1| ring-H2 finger C1A
[Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFEFF 419
MSS R+THWC+ C R+V+ G+D VC YC GGFV+ELD E SPF+ F
Sbjct: 1 MSSSRNTHWCHRCQRAVQLHGQDPVCSYCGGGFVEELDMAEA-SPFDMF 48
>ref|XP_006291489.1| hypothetical protein CARUB_v10017638mg [Capsella rubella]
gi|565467220|ref|XP_006291490.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
gi|482560196|gb|EOA24387.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
gi|482560197|gb|EOA24388.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
Length = 326
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFE 413
MSS R+THWC+ C R+V R RDAVC YC GGFV+E+D L P SPF+
Sbjct: 1 MSSVRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID-LGPSSPFD 46
>ref|XP_002876373.1| hypothetical protein ARALYDRAFT_324170 [Arabidopsis lyrata subsp.
lyrata] gi|297322211|gb|EFH52632.1| hypothetical protein
ARALYDRAFT_324170 [Arabidopsis lyrata subsp. lyrata]
Length = 585
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 273 MSSGRDTHWCYSCSRSVRPRGRDAVCPYCSGGFVQELDELEPFSPFE 413
MSS R+THWC+ C R+V R RDAVC YC GGFV+E+D L P SPF+
Sbjct: 1 MSSVRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID-LGPSSPFD 46