BLASTX nr result
ID: Jatropha_contig00042403
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00042403
(439 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr... 124 5e-29
emb|CBI37506.3| unnamed protein product [Vitis vinifera] 124 5e-29
ref|XP_002524432.1| transcription initiation factor ia, putative... 114 3e-25
gb|EEE94194.2| RNA polymerase 1 specific transcription initiatio... 113 5e-24
ref|XP_002307198.1| predicted protein [Populus trichocarpa] 113 5e-24
gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [... 108 3e-22
gb|ESR63418.1| hypothetical protein CICLE_v10010838mg [Citrus cl... 107 1e-21
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr... 101 2e-20
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr... 101 2e-20
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr... 100 1e-19
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr... 99 5e-19
gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus pe... 82 1e-14
gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus... 82 9e-14
ref|XP_004287706.1| PREDICTED: RNA polymerase I-specific transcr... 80 3e-13
ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcr... 76 5e-13
ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcr... 74 2e-12
gb|AAC16259.1| unknown protein [Arabidopsis thaliana] 75 8e-12
ref|NP_850236.1| RNA polymerase I specific transcription initiat... 75 8e-12
ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcr... 75 1e-11
ref|XP_002881355.1| RNA polymerase I specific transcription init... 75 1e-11
>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Vitis vinifera]
Length = 636
Score = 124 bits (312), Expect(2) = 5e-29
Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 7/98 (7%)
Frame = +3
Query: 96 MGVELTQQ---FNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MGVEL F+EME++NFSD +LVYHVR AL S GD++SY QL+GV+HH +RL+ D
Sbjct: 1 MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
EVALLVTSLKALSGAVSCID ++H+SLLSSIF WN
Sbjct: 61 EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98
Score = 28.5 bits (62), Expect(2) = 5e-29
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YGPDVMDALLEL
Sbjct: 99 YGPDVMDALLEL 110
>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 124 bits (312), Expect(2) = 5e-29
Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 7/98 (7%)
Frame = +3
Query: 96 MGVELTQQ---FNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MGVEL F+EME++NFSD +LVYHVR AL S GD++SY QL+GV+HH +RL+ D
Sbjct: 1 MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
EVALLVTSLKALSGAVSCID ++H+SLLSSIF WN
Sbjct: 61 EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98
Score = 28.5 bits (62), Expect(2) = 5e-29
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YGPDVMDALLEL
Sbjct: 99 YGPDVMDALLEL 110
>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
gi|223536316|gb|EEF37967.1| transcription initiation
factor ia, putative [Ricinus communis]
Length = 640
Score = 114 bits (284), Expect(2) = 3e-25
Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 10/101 (9%)
Frame = +3
Query: 96 MGVELTQQFN----EMED--LNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRL 257
MGVEL Q+ +MED +N++D DLVYHVRDAL S + GD SY QLVGVMHHS+RL
Sbjct: 1 MGVELDSQYKKEIEDMEDDGVNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRL 60
Query: 258 SSDEVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
+ D+VALL+TSLKALSGAVS ID +H+ LL SIF WN
Sbjct: 61 TPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWN 101
Score = 26.9 bits (58), Expect(2) = 3e-25
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YGPDVM+ALLEL
Sbjct: 102 YGPDVMEALLEL 113
>gb|EEE94194.2| RNA polymerase 1 specific transcription initiation factor RRN3
family protein [Populus trichocarpa]
Length = 637
Score = 113 bits (282), Expect(2) = 5e-24
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 14/105 (13%)
Frame = +3
Query: 96 MGVELTQQFNE---MED-------LNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHH 245
MGVELT Q+ E MED ++ +D DLVYHVRDAL+S KTGD SYHQLVGV+HH
Sbjct: 1 MGVELTHQYTEYRAMEDQEEVEEGVSITDWDLVYHVRDALLSVKTGDRSSYHQLVGVLHH 60
Query: 246 SKRLSSDEVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
R + D+VALL+TSLKALSGAVS I+++ H SLL SIF WN
Sbjct: 61 RDRSAPDKVALLLTSLKALSGAVSYINDVDHVSLLQSIFGMSMWN 105
Score = 23.5 bits (49), Expect(2) = 5e-24
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 389 PDVMDALLEL 418
PDVMDALLEL
Sbjct: 108 PDVMDALLEL 117
>ref|XP_002307198.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 113 bits (282), Expect(2) = 5e-24
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 14/105 (13%)
Frame = +3
Query: 96 MGVELTQQFNE---MED-------LNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHH 245
MGVELT Q+ E MED ++ +D DLVYHVRDAL+S KTGD SYHQLVGV+HH
Sbjct: 1 MGVELTHQYTEYRAMEDQEEVEEGVSITDWDLVYHVRDALLSVKTGDRSSYHQLVGVLHH 60
Query: 246 SKRLSSDEVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
R + D+VALL+TSLKALSGAVS I+++ H SLL SIF WN
Sbjct: 61 RDRSAPDKVALLLTSLKALSGAVSYINDVDHVSLLQSIFGMSMWN 105
Score = 23.5 bits (49), Expect(2) = 5e-24
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 389 PDVMDALLEL 418
PDVMDALLEL
Sbjct: 108 PDVMDALLEL 117
>gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
gi|508698705|gb|EOX90601.1| Major facilitator
superfamily protein isoform 1 [Theobroma cacao]
gi|508698706|gb|EOX90602.1| Major facilitator
superfamily protein isoform 1 [Theobroma cacao]
Length = 628
Score = 108 bits (271), Expect(2) = 3e-22
Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 7/98 (7%)
Frame = +3
Query: 96 MGVELTQQFNEMED---LNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG+EL + + EME+ +NF+D ++V HV+DAL S +GD+ SY+QLV VMHHSKRL+ D
Sbjct: 1 MGLELPK-YPEMEEDNFVNFTDSEIVSHVKDALTSVLSGDSNSYNQLVAVMHHSKRLAPD 59
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WN 368
EVALL T+LKAL GAVSCID H+SLLS+IF WN
Sbjct: 60 EVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWN 97
Score = 21.6 bits (44), Expect(2) = 3e-22
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YGP V DAL EL
Sbjct: 98 YGPHVADALAEL 109
>gb|ESR63418.1| hypothetical protein CICLE_v10010838mg [Citrus clementina]
Length = 198
Score = 107 bits (268), Expect = 1e-21
Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = +3
Query: 96 MGVELTQ---QFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG+EL + + +EMED+N SD +LVYHVR+AL S ++GDN++Y+QLV VMH S RL D
Sbjct: 1 MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WNEHVEFMVQM*WMRCSNWVISLA 434
ALL TSLKALSGAVS ID +HESLL SIF WN + M + +ISLA
Sbjct: 61 NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDAL-----KGLIISLA 115
Query: 435 A 437
A
Sbjct: 116 A 116
>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Cucumis sativus]
Length = 626
Score = 101 bits (252), Expect(2) = 2e-20
Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = +3
Query: 96 MGVELTQ---QFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG EL Q + MED+N +D LV +R L S GD + Y+QLVGV+HH RLS D
Sbjct: 1 MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF 362
EVALLVT LKALSGAVSCID I HESLL++IF
Sbjct: 61 EVALLVTCLKALSGAVSCIDIILHESLLAAIF 92
Score = 22.7 bits (47), Expect(2) = 2e-20
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YG +VMDAL+EL
Sbjct: 99 YGSNVMDALIEL 110
>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Cucumis sativus]
Length = 625
Score = 101 bits (252), Expect(2) = 2e-20
Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = +3
Query: 96 MGVELTQ---QFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG EL Q + MED+N +D LV +R L S GD + Y+QLVGV+HH RLS D
Sbjct: 1 MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF 362
EVALLVT LKALSGAVSCID I HESLL++IF
Sbjct: 61 EVALLVTCLKALSGAVSCIDIILHESLLAAIF 92
Score = 22.7 bits (47), Expect(2) = 2e-20
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 383 YGPDVMDALLEL 418
YG +VMDAL+EL
Sbjct: 99 YGSNVMDALIEL 110
>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Glycine max]
Length = 628
Score = 99.8 bits (247), Expect(2) = 1e-19
Identities = 48/95 (50%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +3
Query: 114 QQFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSDEVALLVTSL 293
++F++ME+ +FSD LV+H R L++ TGD E+Y +LVG +H K L+ DEVA+LVT+L
Sbjct: 10 EEFSQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAILVTTL 69
Query: 294 KALSGAVSCIDNIYHESLLSSI----FWNEHVEFM 386
KALSGAVS ID+++HESLL ++ WN ++ M
Sbjct: 70 KALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIM 104
Score = 22.3 bits (46), Expect(2) = 1e-19
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 374 CGIYGPDVMDALLEL 418
CGI D+MDALLEL
Sbjct: 99 CGI---DIMDALLEL 110
>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Glycine max]
Length = 627
Score = 99.0 bits (245), Expect = 5e-19
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Frame = +3
Query: 114 QQFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSDEVALLVTSL 293
++F++ME+ +FSD LV H R L++ TGD E+Y +LVG +H K L+ DEVA+LVT+L
Sbjct: 10 EEFSQMENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLHPKKNLNPDEVAILVTTL 69
Query: 294 KALSGAVSCIDNIYHESLLSSI----FWNEHVEFMVQM*WMRCSNWVISLAA 437
KALSGAVS ID+++HESLL ++ WN ++ M + +ISLAA
Sbjct: 70 KALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDAL-----LELIISLAA 116
>gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus persica]
Length = 622
Score = 82.0 bits (201), Expect(2) = 1e-14
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +3
Query: 96 MGVELTQQ---FNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MGVEL F M D + D LVY RD L S +GD E Y QL+ M+ + L ++
Sbjct: 1 MGVELRDDEAAFRTMGDHDLIDSYLVYRARDTLCSVSSGDTEDYRQLLSAMN-PEELGAN 59
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WNEHVEFM 386
EVA+LVT+LKAL+GAV+ IDN+ H LLS+IF WN + M
Sbjct: 60 EVAMLVTNLKALAGAVAYIDNVLHNELLSAIFKMSLWNYKPDVM 103
Score = 23.1 bits (48), Expect(2) = 1e-14
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 383 YGPDVMDALLE 415
Y PDVMDAL+E
Sbjct: 98 YKPDVMDALIE 108
>gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
Length = 620
Score = 81.6 bits (200), Expect = 9e-14
Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Frame = +3
Query: 129 MEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSDEVALLVTSLKALSG 308
ME+ +SD LV H R L GD +Y +LVG +H K L+ DEVA+LVT+L+ALSG
Sbjct: 15 MENGGYSDYQLVRHFRSVLEEVTKGDRGNYDELVGYLHPKKNLNPDEVAILVTTLRALSG 74
Query: 309 AVSCIDNIYHESLLSSI----FWNEHVEFMVQM*WMRCSNWVISLAA 437
AV CID +HESLL ++ WN E M + +ISLAA
Sbjct: 75 AVCCIDPNHHESLLFAVSRMSLWNYGTEVMDAL-----LELIISLAA 116
>ref|XP_004287706.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Fragaria vesca subsp. vesca]
Length = 628
Score = 79.7 bits (195), Expect = 3e-13
Identities = 52/121 (42%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Frame = +3
Query: 96 MGVELTQQFNEMEDLNFSDPDLVYHVRDALISAKTGDN---ESYHQLVGVMHHSKRLSSD 266
MGVEL Q + +D +SD DL HV+D L+S +GD E+Y +LVG ++ R S D
Sbjct: 1 MGVELGQDLDMNDDGGYSDYDLALHVKDVLLSVSSGDVVSVENYRELVGRLYRPARHSPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSIF----WNEHVEFMVQM*WMRCSNWVISLA 434
+VA LV SLK LSGA S ID+ H LL+ +F WN + M + +ISLA
Sbjct: 61 DVAKLVASLKGLSGAASYIDSAVHVGLLNPLFEMSLWNYGPDVMDAL-----IELIISLA 115
Query: 435 A 437
A
Sbjct: 116 A 116
>ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Solanum tuberosum]
Length = 618
Score = 75.9 bits (185), Expect(2) = 5e-13
Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Frame = +3
Query: 96 MGVELTQQ---FNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG+EL + EME +D DL VR AL SA GD + Y QL+ VMH + + D
Sbjct: 1 MGMELHAEKAGCAEMEIAEITDSDLFKLVRHALKSALQGDPDQYEQLLRVMHPDEGVLPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSI----FWNEHVEFM 386
VALLVT LKALSG+VSC+D ++H+SL++SI WN + M
Sbjct: 61 -VALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVM 103
Score = 23.5 bits (49), Expect(2) = 5e-13
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 383 YGPDVMDALLELGYFL 430
YG DVMDAL+E L
Sbjct: 98 YGTDVMDALMEFNISL 113
>ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Solanum lycopersicum]
Length = 617
Score = 73.9 bits (180), Expect(2) = 2e-12
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +3
Query: 96 MGVELTQQFN---EMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSD 266
MG+EL + EME +D DL VR AL S GD + Y QL+ VMH + + D
Sbjct: 1 MGMELHAESAGCAEMEIAEITDSDLFKLVRHALKSVIQGDPDQYEQLLRVMHPDEGVLPD 60
Query: 267 EVALLVTSLKALSGAVSCIDNIYHESLLSSI----FWNEHVEFM 386
VALLVT LKALSG+VSC+D ++H+SL++SI WN + M
Sbjct: 61 -VALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVM 103
Score = 23.5 bits (49), Expect(2) = 2e-12
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 383 YGPDVMDALLELGYFL 430
YG DVMDAL+E L
Sbjct: 98 YGTDVMDALMEFNISL 113
>gb|AAC16259.1| unknown protein [Arabidopsis thaliana]
Length = 602
Score = 75.1 bits (183), Expect = 8e-12
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 123 NEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKR--LSSDEVALLVTSLK 296
N +++++ SD LV VR AL S KTGD++ Y ++VGVM + D VA L T LK
Sbjct: 18 NYVDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLK 77
Query: 297 ALSGAVSCIDNIYHESLLSSIF----WNEHVEFMVQM*WMRCSNWVISLA 434
ALSGAV+CID ++H+ LLS++F W+ + M + N VISLA
Sbjct: 78 ALSGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDAL-----VNLVISLA 122
>ref|NP_850236.1| RNA polymerase I specific transcription initiation factor RRN3
protein [Arabidopsis thaliana]
gi|20465617|gb|AAM20140.1| unknown protein [Arabidopsis
thaliana] gi|23296957|gb|AAN13210.1| unknown protein
[Arabidopsis thaliana] gi|330253924|gb|AEC09018.1| RNA
polymerase I specific transcription initiation factor
RRN3 protein [Arabidopsis thaliana]
Length = 613
Score = 75.1 bits (183), Expect = 8e-12
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 123 NEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKR--LSSDEVALLVTSLK 296
N +++++ SD LV VR AL S KTGD++ Y ++VGVM + D VA L T LK
Sbjct: 18 NYVDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLK 77
Query: 297 ALSGAVSCIDNIYHESLLSSIF----WNEHVEFMVQM*WMRCSNWVISLA 434
ALSGAV+CID ++H+ LLS++F W+ + M + N VISLA
Sbjct: 78 ALSGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDAL-----VNLVISLA 122
>ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like isoform X1 [Cicer arietinum]
gi|502151248|ref|XP_004508347.1| PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3-like isoform X2 [Cicer arietinum]
gi|502151250|ref|XP_004508348.1| PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3-like isoform X3 [Cicer arietinum]
Length = 620
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Frame = +3
Query: 90 KVMGVELTQQFNEMEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKRLSSDE 269
KV G+ ++ EME + SD L+Y VRD L+ G E+Y +LV +H + S++E
Sbjct: 3 KVHGMSGQEELPEMETTDVSDLQLIYSVRDTLVEVTLGVRENYDELVRYLHPKRNPSAEE 62
Query: 270 VALLVTSLKALSGAVSCIDNIYHESLLSSI----FWN 368
A LVT+L+ LSGAVS ID +H++LL ++ WN
Sbjct: 63 FAALVTTLRGLSGAVSYIDPAHHDALLFALSRLSLWN 99
>ref|XP_002881355.1| RNA polymerase I specific transcription initiation factor RRN3
family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327194|gb|EFH57614.1| RNA polymerase I specific
transcription initiation factor RRN3 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 614
Score = 74.7 bits (182), Expect = 1e-11
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Frame = +3
Query: 129 MEDLNFSDPDLVYHVRDALISAKTGDNESYHQLVGVMHHSKR--LSSDEVALLVTSLKAL 302
+++++ SD DLV VR+AL S KTGD + Y +LVGV++ + D VA L T LKAL
Sbjct: 19 VDNVDLSDTDLVQTVRNALTSVKTGDPDLYSELVGVINKDIKEFRDPDAVAQLETVLKAL 78
Query: 303 SGAVSCIDNIYHESLLSSIF----WNEHVEFMVQM*WMRCSNWVISLA 434
SG+V+CID ++H+ LLSS+F W+ M + N VISLA
Sbjct: 79 SGSVACIDIVHHQKLLSSLFGMKLWDHRPVVMDAL-----VNLVISLA 121