BLASTX nr result

ID: Jatropha_contig00042360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042360
         (827 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526442.1| phosphoribosylamine-glycine ligase, putative...    57   9e-09
ref|XP_002328784.1| predicted protein [Populus trichocarpa] gi|5...    56   2e-07

>ref|XP_002526442.1| phosphoribosylamine-glycine ligase, putative [Ricinus communis]
           gi|223534222|gb|EEF35937.1| phosphoribosylamine-glycine
           ligase, putative [Ricinus communis]
          Length = 534

 Score = 57.4 bits (137), Expect(2) = 9e-09
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
 Frame = +1

Query: 667 HVIKGSRS-FSAVFKCDAAQS---LLIDPHENGASEKKVVCWLLVGGGKKHALCYA 822
           +VI GSRS FS+VFKC A +S   + ID H NG  E++VV  ++ GGG++HALCYA
Sbjct: 60  NVITGSRSSFSSVFKCIARKSQPEVSIDAHNNGGYEERVVVLVIGGGGREHALCYA 115



 Score = 29.3 bits (64), Expect(2) = 9e-09
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
 Frame = +3

Query: 492 SCVTFNLGPSLKLN-----TQSTSSFRLSNS 569
           S VT N  PSLKLN     T +T+SF LSN+
Sbjct: 3   SYVTLNFVPSLKLNVNTTTTTNTNSFHLSNN 33


>ref|XP_002328784.1| predicted protein [Populus trichocarpa] gi|550341814|gb|ERP62843.1|
           hypothetical protein POPTR_0004s23390g [Populus
           trichocarpa]
          Length = 528

 Score = 56.2 bits (134), Expect(2) = 2e-07
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = +1

Query: 667 HVIKGSRSFSAVFKCDAAQSLL---IDPHENGASEKKVVCWLLVGGGKKHALCYA 822
           HVIKG RSF  VFKC A +S L   +    N ASEK++V  ++ GGG++HALCYA
Sbjct: 55  HVIKGLRSFPIVFKCVAQKSELSVSVGAGSNIASEKRLVVLVIGGGGREHALCYA 109



 Score = 26.2 bits (56), Expect(2) = 2e-07
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 489 MSCVTFNLGPSLKLNTQSTSSFRLSN 566
           MSC T NL PSLKL     S F+ SN
Sbjct: 1   MSCATLNLPPSLKL---LNSCFQPSN 23


Top