BLASTX nr result

ID: Jatropha_contig00042237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042237
         (533 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533586.1| conserved hypothetical protein [Ricinus comm...    67   6e-12
ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-07

>ref|XP_002533586.1| conserved hypothetical protein [Ricinus communis]
           gi|223526530|gb|EEF28791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 67.4 bits (163), Expect(2) = 6e-12
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = +1

Query: 271 MGVSNSEMLISEKDLNSMEFNFLVRPSLEFGEKCEIASSQDCINDDGNDL 420
           MGVSNSEML+SEKDL+SMEFNFLVRP+L+F ++C+IA  Q  I+ D +DL
Sbjct: 1   MGVSNSEMLLSEKDLSSMEFNFLVRPALKFEDECDIAPLQ--ISSDPDDL 48



 Score = 28.5 bits (62), Expect(2) = 6e-12
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 486 CKLLVSALKIELPSL 530
           CKLL+S LKI+LPSL
Sbjct: 65  CKLLISTLKIKLPSL 79


>ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|222849846|gb|EEE87393.1|
           hypothetical protein POPTR_0009s03550g [Populus
           trichocarpa]
          Length = 203

 Score = 57.8 bits (138), Expect(2) = 2e-07
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +1

Query: 271 MGVSNSEMLISEKDLNSMEFNFLVRPSLEFGEKCEI 378
           MG SNSEM  SEKDLN MEFNFLVR +LE G+ CEI
Sbjct: 1   MGFSNSEMFFSEKDLNPMEFNFLVRSALELGDDCEI 36



 Score = 23.1 bits (48), Expect(2) = 2e-07
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 486 CKLLVSALKIELPSLE 533
           C++ V  LKI+LPS+E
Sbjct: 58  CEISVPTLKIKLPSVE 73


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