BLASTX nr result
ID: Jatropha_contig00042171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00042171
(432 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 125 7e-27
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 114 1e-23
emb|CBI37849.3| unnamed protein product [Vitis vinifera] 114 1e-23
gb|EEE86704.2| hypothetical protein POPTR_0004s18320g [Populus t... 112 5e-23
gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus pe... 111 8e-23
gb|EEE86903.2| hypothetical protein POPTR_0009s13940g [Populus t... 106 3e-21
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag... 104 1e-20
gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao] 100 3e-19
gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao] gi|50... 100 3e-19
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice... 99 6e-19
gb|ESR35772.1| hypothetical protein CICLE_v10027985mg [Citrus cl... 94 2e-17
gb|ESR35771.1| hypothetical protein CICLE_v10027985mg [Citrus cl... 94 2e-17
gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus... 87 2e-15
gb|ESQ50823.1| hypothetical protein EUTSA_v10022624mg [Eutrema s... 80 3e-13
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps... 77 3e-12
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc... 76 4e-12
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 75 1e-11
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops... 74 1e-11
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops... 74 1e-11
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 74 1e-11
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 125 bits (313), Expect = 7e-27
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEKTVENPE K KE ANGGD +MK+GEK+SSRSSKH+ +EKDDGDDD+ RS
Sbjct: 1 MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60
Query: 380 KRSKSGDESRDHDRHKE 430
KR KSGDESRD D+ KE
Sbjct: 61 KRPKSGDESRDPDQRKE 77
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 114 bits (286), Expect = 1e-23
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEYDYLEKTVENPE++K KET NGGD+++K+GEKE SRSSKHK +D+ DD R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHK--SEDNDDDLDRRL 58
Query: 380 KRSKSGDESRDHDRHKE 430
KRSKSGD+SRDHDR KE
Sbjct: 59 KRSKSGDDSRDHDRRKE 75
>emb|CBI37849.3| unnamed protein product [Vitis vinifera]
Length = 228
Score = 114 bits (286), Expect = 1e-23
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEYDYLEKTVENPE++K KET NGGD+++K+GEKE SRSSKHK +D+ DD R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHK--SEDNDDDLDRRL 58
Query: 380 KRSKSGDESRDHDRHKE 430
KRSKSGD+SRDHDR KE
Sbjct: 59 KRSKSGDDSRDHDRRKE 75
>gb|EEE86704.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 112 bits (280), Expect = 5e-23
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDG-DDDHHR 376
MEFDEYDYLEKTVEN E KAKETANGGDD +K+ EK+ SRSSKH+ EKD G DD+ R
Sbjct: 1 MEFDEYDYLEKTVENLEPPKAKETANGGDDKVKSREKDRSRSSKHRSDEKDLGNDDERSR 60
Query: 377 SKRSKSGDESRDHDRHKE 430
SKRS+SGDESRD +R KE
Sbjct: 61 SKRSRSGDESRDRERSKE 78
>gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus persica]
Length = 607
Score = 111 bits (278), Expect = 8e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEKTVENPE +KAKETANGG++++K+GEK SRSSKHK EK G D+ S
Sbjct: 1 MDFDEYEYLEKTVENPEPQKAKETANGGEETLKSGEKGRSRSSKHKSDEK--GHDEERHS 58
Query: 380 KRSKSGDESR--DHDRHKE 430
KRSKSGD+SR DHDRH+E
Sbjct: 59 KRSKSGDDSREHDHDRHRE 77
>gb|EEE86903.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 106 bits (265), Expect = 3e-21
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
MEFDEYDYLEKTVENPE K +ETANG D +K+ EK+ RSSK + +KDDGDD+ RS
Sbjct: 1 MEFDEYDYLEKTVENPEPPKVRETANGEGDIVKSREKDRLRSSKRRSDDKDDGDDERRRS 60
Query: 380 KRSKSGDESRDHDRHKE 430
K+S+SGDE+RD +R KE
Sbjct: 61 KQSRSGDENRDRERSKE 77
>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
vesca]
Length = 588
Score = 104 bits (259), Expect = 1e-20
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEYDYLEKTVENPE +KE ANGGD+++K+G+K SRSSKH+ +KD D RS
Sbjct: 1 MDFDEYDYLEKTVENPEPLASKENANGGDETLKSGDKGRSRSSKHRSDDKD--HDGERRS 58
Query: 380 KRSKSGDESRDHDRHKE 430
KRSKSGDE DHDR +E
Sbjct: 59 KRSKSGDELHDHDRERE 75
>gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao]
Length = 545
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 376
M+FDEY+YLEKTVEN E +KAKE NGG DS+K+ E+ SRSSKHK E+ DD +++H R
Sbjct: 1 MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60
Query: 377 SKRSKSGDE-SRDHDRHKE 430
SKRSKS +E SRD DRHKE
Sbjct: 61 SKRSKSREESSRDLDRHKE 79
>gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao]
gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
[Theobroma cacao]
Length = 581
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 376
M+FDEY+YLEKTVEN E +KAKE NGG DS+K+ E+ SRSSKHK E+ DD +++H R
Sbjct: 1 MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60
Query: 377 SKRSKSGDE-SRDHDRHKE 430
SKRSKS +E SRD DRHKE
Sbjct: 61 SKRSKSREESSRDLDRHKE 79
>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
Length = 613
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEKTVEN E + KET NGGD ++K+ ++ SRSSKHK SEKDDGD D H
Sbjct: 1 MDFDEYEYLEKTVENSEFKNQKETTNGGDRTVKSEDRGRSRSSKHKDSEKDDGDVD-HCL 59
Query: 380 KRSKSGDESRDHDRHKE 430
K+SKSGD SR +DR KE
Sbjct: 60 KQSKSGDVSRGYDRQKE 76
>gb|ESR35772.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
Length = 639
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 376
M+FDEY+YLEK VENPE K KETAN GD ++K+ ++ SRSSK K EK +D DDD HR
Sbjct: 1 MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
Query: 377 SKRSKSGDESRDHDRHKE 430
S+ SKS DESR+HDR KE
Sbjct: 60 SRGSKSRDESRNHDRRKE 77
>gb|ESR35771.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
Length = 647
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 376
M+FDEY+YLEK VENPE K KETAN GD ++K+ ++ SRSSK K EK +D DDD HR
Sbjct: 1 MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
Query: 377 SKRSKSGDESRDHDRHKE 430
S+ SKS DESR+HDR KE
Sbjct: 60 SRGSKSRDESRNHDRRKE 77
>gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
Length = 603
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEKTVEN E +K K NG D S+K+ E+ R+SK K EKDD D + H S
Sbjct: 1 MDFDEYEYLEKTVENAEVKKEKHRINGSDRSVKSEERGHGRNSKRKSDEKDDDDVEFH-S 59
Query: 380 KRSKSGDESRDHDRHKE 430
K SKSGD+SR ++R +E
Sbjct: 60 KHSKSGDDSRHYERKRE 76
>gb|ESQ50823.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
Length = 566
Score = 79.7 bits (195), Expect = 3e-13
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGG-DDSMKTGEKESSRSSKHKISEKDDGDDDHHR 376
M+FDEY+YLEKTVENP E NGG D+ K KE SRSS+H+ EK D D+D R
Sbjct: 1 MDFDEYEYLEKTVENPHLEN--EVGNGGGDEKAKPEVKERSRSSRHRSDEKRDEDEDGRR 58
Query: 377 SKRSKSGDESRDHDRHKE 430
SKRS+S SR DR ++
Sbjct: 59 SKRSRSHHRSRSRDRERD 76
>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
gi|482568547|gb|EOA32736.1| hypothetical protein
CARUB_v10016041mg [Capsella rubella]
Length = 550
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/76 (52%), Positives = 50/76 (65%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEKTVENP E NGGD+ K+ KE SRSS+H + D D++ RS
Sbjct: 1 MDFDEYEYLEKTVENPLLEN--EVVNGGDEKAKSEGKERSRSSRH----RSDEDEEGRRS 54
Query: 380 KRSKSGDESRDHDRHK 427
KRS+S SR DRH+
Sbjct: 55 KRSRSHHRSRSRDRHR 70
>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/77 (53%), Positives = 51/77 (66%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 379
M+FDEY+YLEK VENPE ANGGD ++K+ E+ + SSKHK + DD D H R
Sbjct: 1 MDFDEYEYLEKAVENPEVN---HRANGGDKNVKSEERGRNGSSKHKDDDDDDVVDLHPR- 56
Query: 380 KRSKSGDESRDHDRHKE 430
SKSGD SRD +R +E
Sbjct: 57 -HSKSGDNSRDRERQRE 72
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 370
M+FDEY+YLEKTVENP E N GGD+ +K+ +E SRSS+H+ EK D D+D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGRERSRSSRHRGDEKKERDEDEDG 58
Query: 371 HRSKRSKSGDESRDHDRHKE 430
RSKRS+S SR DR ++
Sbjct: 59 RRSKRSRSHHRSRSRDRERD 78
>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 610
Score = 74.3 bits (181), Expect = 1e-11
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 370
M+FDEY+YLEKTVENP E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 371 HRSKRSKSGDESRDHDRHKE 430
RSKRS+S SR DR ++
Sbjct: 59 RRSKRSRSHHRSRSRDRERD 78
>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 599
Score = 74.3 bits (181), Expect = 1e-11
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 370
M+FDEY+YLEKTVENP E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 371 HRSKRSKSGDESRDHDRHKE 430
RSKRS+S SR DR ++
Sbjct: 59 RRSKRSRSHHRSRSRDRERD 78
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 74.3 bits (181), Expect = 1e-11
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +2
Query: 200 MEFDEYDYLEKTVENPEARKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 370
M+FDEY+YLEKTVENP E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 371 HRSKRSKSGDESRDHDRHKE 430
RSKRS+S SR DR ++
Sbjct: 59 RRSKRSRSHHRSRSRDRERD 78