BLASTX nr result

ID: Jatropha_contig00042010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042010
         (601 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530316.1| zinc finger protein, putative [Ricinus commu...    58   2e-06
ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002530316.1| zinc finger protein, putative [Ricinus communis]
           gi|223530172|gb|EEF32083.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 255

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = +3

Query: 447 MGNKLQKPLGSDRVXXXXXXXXXDSNFTCDLCIEPNLSDRKFKNGGLCNHP 599
           MGNKLQKP  ++ V          S+FTC++CIEP LS++KF+N  LC HP
Sbjct: 1   MGNKLQKPQETNVVEEHEQKEEVVSSFTCEICIEPMLSNKKFENASLCTHP 51


>ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|222862913|gb|EEF00420.1|
           hypothetical protein POPTR_0019s12340g [Populus
           trichocarpa] gi|550317351|gb|ERP49293.1| hypothetical
           protein POPTR_0019s12340g [Populus trichocarpa]
           gi|550317352|gb|ERP49294.1| hypothetical protein
           POPTR_0019s12340g [Populus trichocarpa]
           gi|550317353|gb|ERP49295.1| hypothetical protein
           POPTR_0019s12340g [Populus trichocarpa]
          Length = 241

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = +3

Query: 447 MGNKLQKPLGSDRVXXXXXXXXXDSNFTCDLCIEPNLSDRKFKNGGLCNHP 599
           MGN +QKP G++           DSNFTC++C +P LS R FKNG +C HP
Sbjct: 1   MGNTMQKPQGTEVEGTEQLQQEEDSNFTCEICSDPMLSTRNFKNGIVCKHP 51


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