BLASTX nr result

ID: Jatropha_contig00041951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00041951
         (695 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricin...   128   2e-27

>ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223539303|gb|EEF40894.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1109

 Score =  128 bits (321), Expect = 2e-27
 Identities = 75/122 (61%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +1

Query: 331 MADGD-SGIWPGGETHGVDGVDASGVGEGEDRMMDLDMLLHILEESDDPSQNSPEDFSYK 507
           MADG  SG WPGGE   VD +D  G G G+D  MD D+  +IL E  DPSQ+S EDFS K
Sbjct: 1   MADGGGSGDWPGGEILDVDELDGGGEG-GDDLSMDFDLFFNILSEPVDPSQSSHEDFSCK 59

Query: 508 DLKVESAPDAGNQKNVQLQSGFQLLDGLHALQSEPIDTGTFYRSHDSETSDAR-GGSVGS 684
           + KVESA D GNQKN QL SG  +LDG HAL+SE IDT TFY SH     DAR GGSV S
Sbjct: 60  NAKVESATDVGNQKNCQLPSGGLMLDGAHALESESIDTATFYPSH---KPDARIGGSVTS 116

Query: 685 FD 690
           FD
Sbjct: 117 FD 118


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