BLASTX nr result

ID: Jatropha_contig00041786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00041786
         (654 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERP52164.1| hypothetical protein POPTR_0015s06470g [Populus t...    57   3e-06
ref|XP_002328681.1| AP2/ERF domain-containing transcription fact...    57   3e-06

>gb|ERP52164.1| hypothetical protein POPTR_0015s06470g [Populus trichocarpa]
          Length = 321

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +3

Query: 348 MPGLRRPILDQSLSFDXXXXXXXXX---MIATRKVRIICHDPDATXXXXXXXXAHINPIG 518
           MPGL+RPILDQ   FD            M A+RKVRIICHDP+AT         + +   
Sbjct: 1   MPGLQRPILDQDRIFDQEKQKKPAMESNMKASRKVRIICHDPEATDSSSDEDEEYFDRCN 60

Query: 519 A-KRFVKEINLSMLPNESRSENCPGETSNG 605
             K+F++EI L + P++S  E  P +   G
Sbjct: 61  RWKQFIREITLPVFPSKSILEG-PSQDKTG 89


>ref|XP_002328681.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa]
          Length = 321

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +3

Query: 348 MPGLRRPILDQSLSFDXXXXXXXXX---MIATRKVRIICHDPDATXXXXXXXXAHINPIG 518
           MPGL+RPILDQ   FD            M A+RKVRIICHDP+AT         + +   
Sbjct: 1   MPGLQRPILDQDRIFDQEKQKKPAMESNMKASRKVRIICHDPEATDSSSDEDEEYFDRCN 60

Query: 519 A-KRFVKEINLSMLPNESRSENCPGETSNG 605
             K+F++EI L + P++S  E  P +   G
Sbjct: 61  RWKQFIREITLPVFPSKSILEG-PSQDKTG 89


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