BLASTX nr result
ID: Jatropha_contig00041745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00041745
(696 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527323.1| double-stranded RNA binding protein, putativ... 100 6e-27
ref|XP_002303835.1| predicted protein [Populus trichocarpa] 53 3e-12
gb|ESR40786.1| hypothetical protein CICLE_v10026528mg [Citrus cl... 44 5e-09
gb|EOY26000.1| RNAse THREE protein 1, putative isoform 1 [Theobr... 47 1e-08
gb|ESR40785.1| hypothetical protein CICLE_v10026528mg [Citrus cl... 44 5e-07
emb|CBI25610.3| unnamed protein product [Vitis vinifera] 44 5e-06
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif... 44 5e-06
ref|XP_006343690.1| PREDICTED: dicer-like protein 4-like isoform... 44 9e-06
ref|XP_006343691.1| PREDICTED: dicer-like protein 4-like isoform... 44 9e-06
ref|NP_001266210.1| dicer-like protein 4 [Solanum lycopersicum] ... 44 9e-06
>ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223533323|gb|EEF35075.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 219
Score = 99.8 bits (247), Expect(2) = 6e-27
Identities = 72/158 (45%), Positives = 87/158 (55%), Gaps = 18/158 (11%)
Frame = +3
Query: 216 MEKKC----------HINLKNLPL--PPDPAYSESQVKKIKTNFRYVPKAAKPGQEE--G 353
MEKKC HINLKNLP PP + QVK+ KT RYVPK AKP EE G
Sbjct: 1 MEKKCLEPYPQQKQSHINLKNLPPINPPTTSIPYYQVKRNKTITRYVPKVAKPRPEEEGG 60
Query: 354 RKEVKFDHEANTEADLFADINIVQKQSTNXXXXXXDDASIKHIIESNNTNTSKTQVQNKL 533
K VKFDHEANT+AD+ A+ + S+ +IKHI ++N + +KL
Sbjct: 61 VKAVKFDHEANTKADILAEQEEIDDLSSV--------CAIKHI----DSNNFVKKTHSKL 108
Query: 534 NFGRETSFDYQL----GEASKVSPKSQLHEICAANNWK 635
N+ E S + L E +VS KSQLHEIC ANNWK
Sbjct: 109 NY--EGSDNRVLVDKSSELKRVSAKSQLHEICVANNWK 144
Score = 47.8 bits (112), Expect(2) = 6e-27
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPPL+ECCK+EGPCH +LFTF
Sbjct: 144 KPPLYECCKEEGPCHQRLFTF 164
>ref|XP_002303835.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 53.1 bits (126), Expect(2) = 3e-12
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 312 RYVPKAAKPGQEEGRKEVK-FDHEANTEADLFADINIVQKQSTNXXXXXXDDASIKHIIE 488
+YV + A+ G +EG K K FD EANT ADL ADIN Q T D ++IK
Sbjct: 2 KYVVEGARAGPKEGLKPAKQFDDEANTTADLLADINPSQIIKTG-----DDSSTIK---- 52
Query: 489 SNNTNTSKTQVQNKLNFGRETSFDYQLGEASKVSPKSQLHEICAANNWK 635
NT+K ++ + K+S KSQL E AAN WK
Sbjct: 53 ----NTTKVG-----EISKDDKNSHNDSGGPKISAKSQLLETLAANKWK 92
Score = 44.7 bits (104), Expect(2) = 3e-12
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPPLFEC K+EGPCH KLFT+
Sbjct: 92 KPPLFECFKEEGPCHKKLFTY 112
>gb|ESR40786.1| hypothetical protein CICLE_v10026528mg [Citrus clementina]
Length = 200
Score = 44.3 bits (103), Expect(2) = 5e-09
Identities = 41/133 (30%), Positives = 60/133 (45%)
Frame = +3
Query: 237 NLKNLPLPPDPAYSESQVKKIKTNFRYVPKAAKPGQEEGRKEVKFDHEANTEADLFADIN 416
NLKNLP P DP YS + K + N+ +P Q + +K + + LF
Sbjct: 21 NLKNLP-PIDP-YSITSTKSHQVNYE-IPSWRIAKQMPKEETMK----SGDDDALFCLTK 73
Query: 417 IVQKQSTNXXXXXXDDASIKHIIESNNTNTSKTQVQNKLNFGRETSFDYQLGEASKVSPK 596
+ ST+ NN TS ++ + +E+ + G +KVS K
Sbjct: 74 HIDPNSTSSVI--------------NNIETSGYDYEDDRFYEKESKNE---GAPNKVSAK 116
Query: 597 SQLHEICAANNWK 635
S+LHEICAAN+WK
Sbjct: 117 SKLHEICAANHWK 129
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPP F+CC++EGPC+ KLFTF
Sbjct: 129 KPPSFDCCQEEGPCYRKLFTF 149
>gb|EOY26000.1| RNAse THREE protein 1, putative isoform 1 [Theobroma cacao]
Length = 223
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 50/144 (34%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Frame = +3
Query: 222 KKCHINLKNLPLPPDPAYSES--QVKKIKTNFRYVPKAAKPGQEEGRKEVKFDHEANTEA 395
+K +NLK+LP P DP+ Q K + R A+ +EG V FD E A
Sbjct: 22 QKFIVNLKDLP-PIDPSLITPLCQDKYENPSSRNDHNVARRSPKEGTNLVGFD-EGLRIA 79
Query: 396 DLFADINIVQKQSTNXXXXXXDDASIKHIIESNNTNTSKTQVQNKLNFGRETSF---DYQ 566
D+ AD N+ Q S +I+SNN NF RE +
Sbjct: 80 DI-ADRNLGQDMKVEEGVCL----SSTKLIDSNNAKG--------FNFNRENENCRNNLA 126
Query: 567 LGEASK-VSPKSQLHEICAANNWK 635
+ +A K VS KS+LHEICA NNWK
Sbjct: 127 IQDAPKRVSAKSELHEICATNNWK 150
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
K PL+ECCK+EG H+KLFTF
Sbjct: 150 KLPLYECCKEEGLSHMKLFTF 170
>gb|ESR40785.1| hypothetical protein CICLE_v10026528mg [Citrus clementina]
Length = 146
Score = 44.3 bits (103), Expect(2) = 5e-07
Identities = 41/133 (30%), Positives = 60/133 (45%)
Frame = +3
Query: 237 NLKNLPLPPDPAYSESQVKKIKTNFRYVPKAAKPGQEEGRKEVKFDHEANTEADLFADIN 416
NLKNLP P DP YS + K + N+ +P Q + +K + + LF
Sbjct: 21 NLKNLP-PIDP-YSITSTKSHQVNYE-IPSWRIAKQMPKEETMK----SGDDDALFCLTK 73
Query: 417 IVQKQSTNXXXXXXDDASIKHIIESNNTNTSKTQVQNKLNFGRETSFDYQLGEASKVSPK 596
+ ST+ NN TS ++ + +E+ + G +KVS K
Sbjct: 74 HIDPNSTSSVI--------------NNIETSGYDYEDDRFYEKESKNE---GAPNKVSAK 116
Query: 597 SQLHEICAANNWK 635
S+LHEICAAN+WK
Sbjct: 117 SKLHEICAANHWK 129
Score = 36.2 bits (82), Expect(2) = 5e-07
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKL 687
KPP F+CC++EGPC+ KL
Sbjct: 129 KPPSFDCCQEEGPCYRKL 146
>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 43.9 bits (102), Expect(2) = 5e-06
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFT 693
KPP FECCK+EGP HLKLFT
Sbjct: 1553 KPPSFECCKEEGPSHLKLFT 1572
Score = 32.7 bits (73), Expect(2) = 5e-06
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 570 GEASKVSPKSQLHEICAANNWK 635
G KVS K++++EICAAN WK
Sbjct: 1532 GGVQKVSTKARMYEICAANYWK 1553
>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 43.9 bits (102), Expect(2) = 5e-06
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFT 693
KPP FECCK+EGP HLKLFT
Sbjct: 1552 KPPSFECCKEEGPSHLKLFT 1571
Score = 32.7 bits (73), Expect(2) = 5e-06
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 570 GEASKVSPKSQLHEICAANNWK 635
G KVS K++++EICAAN WK
Sbjct: 1531 GGVQKVSTKARMYEICAANYWK 1552
>ref|XP_006343690.1| PREDICTED: dicer-like protein 4-like isoform X1 [Solanum tuberosum]
Length = 1622
Score = 43.5 bits (101), Expect(2) = 9e-06
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPPLFECCK+ GP HLK FTF
Sbjct: 1555 KPPLFECCKETGPSHLKEFTF 1575
Score = 32.3 bits (72), Expect(2) = 9e-06
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 570 GEASKVSPKSQLHEICAANNWK 635
G + S KS+LHEICAAN WK
Sbjct: 1534 GGSKTESAKSRLHEICAANCWK 1555
>ref|XP_006343691.1| PREDICTED: dicer-like protein 4-like isoform X2 [Solanum tuberosum]
Length = 1621
Score = 43.5 bits (101), Expect(2) = 9e-06
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPPLFECCK+ GP HLK FTF
Sbjct: 1554 KPPLFECCKETGPSHLKEFTF 1574
Score = 32.3 bits (72), Expect(2) = 9e-06
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 570 GEASKVSPKSQLHEICAANNWK 635
G + S KS+LHEICAAN WK
Sbjct: 1533 GGSKTESAKSRLHEICAANCWK 1554
>ref|NP_001266210.1| dicer-like protein 4 [Solanum lycopersicum]
gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum
lycopersicum]
Length = 1620
Score = 43.5 bits (101), Expect(2) = 9e-06
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 634 KPPLFECCKDEGPCHLKLFTF 696
KPPLFECCK+ GP HLK FTF
Sbjct: 1553 KPPLFECCKETGPSHLKEFTF 1573
Score = 32.3 bits (72), Expect(2) = 9e-06
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 570 GEASKVSPKSQLHEICAANNWK 635
G + S KS+LHEICAAN WK
Sbjct: 1532 GGSKTESAKSRLHEICAANCWK 1553