BLASTX nr result
ID: Jatropha_contig00041521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00041521
(673 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518855.1| structural constituent of ribosome, putative... 247 2e-63
ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 242 8e-62
gb|EOY25088.1| Translation elongation factor EF1B/ribosomal prot... 236 3e-60
gb|EEE82770.2| hypothetical protein POPTR_0001s10930g [Populus t... 231 1e-58
gb|ESR52540.1| hypothetical protein CICLE_v10022161mg [Citrus cl... 229 4e-58
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 223 5e-56
ref|XP_002297965.1| predicted protein [Populus trichocarpa] 222 9e-56
gb|AFK44002.1| unknown [Lotus japonicus] 221 2e-55
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 220 3e-55
ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 219 6e-55
ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 218 1e-54
gb|ESQ28897.1| hypothetical protein EUTSA_v10023690mg [Eutrema s... 218 2e-54
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 216 4e-54
gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana] 213 4e-53
ref|NP_176632.1| translation elongation factor EF1B/ribosomal p... 213 4e-53
gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus... 212 7e-53
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido... 211 2e-52
ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Caps... 210 3e-52
ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 210 3e-52
sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alp... 207 3e-51
>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 205
Score = 247 bits (631), Expect = 2e-63
Identities = 131/186 (70%), Positives = 144/186 (77%), Gaps = 2/186 (1%)
Frame = +3
Query: 93 PFCPKSFSEFPSLSFTLKLFPAANSKALLFQKRNG--GITVKAQTLDXXXXXXXXXXXXX 266
P CPK FS+FP FP+ S A +KR+ +T+K+Q LD
Sbjct: 21 PLCPKLFSKFPC-------FPSL-SFAHTIKKRHSVRSLTIKSQALDFSGSFYEGSGFGS 72
Query: 267 XXDPPSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGG 446
DPP+ T SG+TAVED E PQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGG
Sbjct: 73 EEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGG 132
Query: 447 GMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNV 626
GMYVEVFNRGVIPLA+SIKKKNKAGETNTYLDGIYLLFTYFTKPESIE+LEATL TDD++
Sbjct: 133 GMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEMLEATLNTDDDI 192
Query: 627 IRSMSF 644
IRS SF
Sbjct: 193 IRSSSF 198
>ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 201
Score = 242 bits (617), Expect = 8e-62
Identities = 125/183 (68%), Positives = 141/183 (77%)
Frame = +3
Query: 96 FCPKSFSEFPSLSFTLKLFPAANSKALLFQKRNGGITVKAQTLDXXXXXXXXXXXXXXXD 275
FCPK+ S+ PSLS +L FP +K L+F+ R G + V Q+L+ D
Sbjct: 15 FCPKTLSQIPSLSQSLS-FPHTTAKPLVFRTRPGRVNV--QSLEFSGSFFEGGGFQSDDD 71
Query: 276 PPSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMY 455
P S G+TAVED E P CPPGLRQYETMAVLRPDMSEDERLALTQKYEELL+AGGGMY
Sbjct: 72 PNSPNGPGMTAVEDKEEPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLIAGGGMY 131
Query: 456 VEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRS 635
VEVFNRGVIPLA+SI+KKNKAGE+NTYLDGIYLLFTYFTKPES+E LE LK DDNVIRS
Sbjct: 132 VEVFNRGVIPLAYSIQKKNKAGESNTYLDGIYLLFTYFTKPESLEFLEQNLKADDNVIRS 191
Query: 636 MSF 644
+SF
Sbjct: 192 LSF 194
>gb|EOY25088.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Theobroma cacao]
Length = 337
Score = 236 bits (603), Expect = 3e-60
Identities = 129/190 (67%), Positives = 141/190 (74%), Gaps = 6/190 (3%)
Frame = +3
Query: 93 PFCPKSFSEFPSL---SFTLKLFPAAN-SKALLFQKRNG--GITVKAQTLDXXXXXXXXX 254
PFCP+ ++FP L SFT L P SK+L KR +TVKA+TLD
Sbjct: 142 PFCPQHLTQFPPLPFLSFTHSLKPIPKKSKSLTSLKRGNFTTVTVKARTLDFSGSFFEGG 201
Query: 255 XXXXXXDPPSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELL 434
DPPS SG+TA+ED E PQCPPGLRQYETM VLRPDMSEDERLALTQKYEELL
Sbjct: 202 FGSDD-DPPSQPGSGITALEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELL 260
Query: 435 VAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKT 614
VAGGGMYVEVFNRGV+PLA+SIKKKNKAGETNTYLDGIYLLFTYF KPES+ LE L T
Sbjct: 261 VAGGGMYVEVFNRGVVPLAYSIKKKNKAGETNTYLDGIYLLFTYFMKPESMATLEVALNT 320
Query: 615 DDNVIRSMSF 644
DD+VIRS SF
Sbjct: 321 DDDVIRSSSF 330
>gb|EEE82770.2| hypothetical protein POPTR_0001s10930g [Populus trichocarpa]
Length = 240
Score = 231 bits (589), Expect = 1e-58
Identities = 128/189 (67%), Positives = 143/189 (75%), Gaps = 5/189 (2%)
Frame = +3
Query: 93 PFCPKSFSEFPSL---SFTLKLFPAANSKALLFQKRNGGIT-VKAQTLDXXXXXXXXXXX 260
PF P SFS+ PSL SF+ L P N+ L+++ + T VKAQT+D
Sbjct: 46 PFYPSSFSKSPSLPLLSFSQTLKPFPNTSKLVYRAHSNPTTAVKAQTVDFAGSFYEGGIG 105
Query: 261 XXXXDPPSSTNSG-LTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLV 437
+P S SG +TAVE+ E P CPPGLRQYETMAVLRPDMSEDERLALTQKYEELLV
Sbjct: 106 SDD-EPDSPIGSGTMTAVEEKETPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLV 164
Query: 438 AGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTD 617
AGGGMYVEVFNRGV+PLA+SIKKKNKAGE+NTYLDGIYLLFTYFTKPESI ILE TL TD
Sbjct: 165 AGGGMYVEVFNRGVVPLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESIGILEQTLNTD 224
Query: 618 DNVIRSMSF 644
D+VIRS SF
Sbjct: 225 DDVIRSSSF 233
>gb|ESR52540.1| hypothetical protein CICLE_v10022161mg [Citrus clementina]
Length = 219
Score = 229 bits (585), Expect = 4e-58
Identities = 126/195 (64%), Positives = 143/195 (73%), Gaps = 11/195 (5%)
Frame = +3
Query: 93 PFCPKSFSEFPS---LSF--TLKLFPAANSKALLFQKRNGG---ITVKAQTLDXXXXXXX 248
PF P+ S+ PS SF +LK F N+K+L+ K+N +TVKAQT+D
Sbjct: 17 PFYPQQLSQLPSSPLFSFARSLKTF-RTNAKSLILHKKNSNSVSLTVKAQTIDFSGSFFE 75
Query: 249 XXXXXXXXDP---PSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQK 419
DP P + TA+ED E PQCPPGLRQYETM VLRPDMSEDERLALTQK
Sbjct: 76 GGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQK 135
Query: 420 YEELLVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILE 599
YEELLVAGGGMYVEVFNRGVIPLA+SI+K+NKAGE+NTYLDGIYLLFTYFTKPESIE LE
Sbjct: 136 YEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALE 195
Query: 600 ATLKTDDNVIRSMSF 644
T+K DD+VIRS SF
Sbjct: 196 RTMKADDDVIRSSSF 210
>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 223 bits (567), Expect = 5e-56
Identities = 124/186 (66%), Positives = 133/186 (71%), Gaps = 10/186 (5%)
Frame = +3
Query: 114 SEFPSLSFTLKLFPA---------ANSKALLFQKRNG-GITVKAQTLDXXXXXXXXXXXX 263
S PS SF PA A SK+ + KRN G +++AQTLD
Sbjct: 22 SSKPSSSFLSSPIPAFSRTPKTLFAESKSHFYPKRNDHGFSIRAQTLDFSDSFFEGGFGS 81
Query: 264 XXXDPPSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAG 443
DP S G T VE+ E PQCPPGLRQYETM VLRPDMSEDERLALTQKYEE+LVAG
Sbjct: 82 ED-DPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAG 140
Query: 444 GGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDN 623
GGMYVEVFNRGVIPLA+SIKKKNKAGETNTYLDGIYLLFTYFTKPESI LE T+ TDDN
Sbjct: 141 GGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDN 200
Query: 624 VIRSMS 641
VIRSMS
Sbjct: 201 VIRSMS 206
>ref|XP_002297965.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 222 bits (565), Expect = 9e-56
Identities = 121/176 (68%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Frame = +3
Query: 123 PSLSFTLKLFPAANSKALLFQKRNGGIT-VKAQTLDXXXXXXXXXXXXXXXDPPSSTNSG 299
P LSF+ L P N+ L+++ + T VKAQT+D +P S SG
Sbjct: 3 PLLSFSQTLKPFPNTSKLVYRAHSNPTTAVKAQTVDFAGSFYEGGIGSDD-EPGSPIGSG 61
Query: 300 -LTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 476
+TAVE+ E P CPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG
Sbjct: 62 TMTAVEEKETPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 121
Query: 477 VIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSMSF 644
V+PLA+SIKKKNKAGE+NTYLDGIYLLFTYFTKPESI ILE TL TDD+VIRS SF
Sbjct: 122 VVPLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESIGILEQTLNTDDDVIRSSSF 177
>gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 221 bits (562), Expect = 2e-55
Identities = 122/182 (67%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
Frame = +3
Query: 102 PKSFSEFPSLSFTLKLFPAANSKALLFQKRNGGI-TVKAQTLDXXXXXXXXXXXXXXXDP 278
P +F P +F LF A SK+ +QK+N + +VKAQTLD D
Sbjct: 26 PSTFFSSPIRAFK-PLF--AESKSHCYQKKNDSVLSVKAQTLDFTDSFFEGGLGSE--DD 80
Query: 279 PSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYV 458
+S+ +GLTA E+ E PQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYV
Sbjct: 81 LNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYV 140
Query: 459 EVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSM 638
EVFNRGVIPLA+SIKKKNKAGETNTYLDGIYLL+TYFTKPESI LE TL DD+V+RS
Sbjct: 141 EVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYFTKPESIVALEETLLADDDVLRST 200
Query: 639 SF 644
+F
Sbjct: 201 TF 202
>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 220 bits (560), Expect = 3e-55
Identities = 116/174 (66%), Positives = 132/174 (75%)
Frame = +3
Query: 123 PSLSFTLKLFPAANSKALLFQKRNGGITVKAQTLDXXXXXXXXXXXXXXXDPPSSTNSGL 302
P SFT+ + + + +R G++++A TLD DP S G+
Sbjct: 23 PITSFTVF---SGKQRFIYHPRRAPGLSIRALTLDFSGSFFEGGFGSDD-DPNSPPGPGI 78
Query: 303 TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 482
AVED + PQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI
Sbjct: 79 AAVEDKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 138
Query: 483 PLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSMSF 644
PLA+SIKKKNKAGE+NTYLDGIYLLFTYFTKPES+E+LEATL DD+VIRS SF
Sbjct: 139 PLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSF 192
>ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum tuberosum]
Length = 196
Score = 219 bits (558), Expect = 6e-55
Identities = 120/181 (66%), Positives = 134/181 (74%), Gaps = 4/181 (2%)
Frame = +3
Query: 114 SEFPSLSFTLKLFPAA---NSKALLFQKRNGGITVKAQTLDXXXXXXXXXXXXXXXD-PP 281
S PSL+ TL + N K + N G +KAQTL+ D PP
Sbjct: 9 SVLPSLTSTLSSSKPSIPFNFKGFTKRVNNSGQILKAQTLEFSGSFFEGGFGGGNADEPP 68
Query: 282 SSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVE 461
++ SG++AVED E PQCPPGLR YETM VLRPDMSEDERLALTQKYEELLVAGGGMYVE
Sbjct: 69 TTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVE 128
Query: 462 VFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSMS 641
VFNRGVIPLA+SI++KNKAGETNTYLDGIYLLFTYFTKPESI LEATL TDD+VIRS +
Sbjct: 129 VFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPESIVPLEATLVTDDDVIRSST 188
Query: 642 F 644
F
Sbjct: 189 F 189
>ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum lycopersicum]
Length = 196
Score = 218 bits (555), Expect = 1e-54
Identities = 119/181 (65%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Frame = +3
Query: 114 SEFPSLSFTLKLFPAA---NSKALLFQKRNGGITVKAQTLDXXXXXXXXXXXXXXXD-PP 281
S PSL+ TL + N K + N G +KAQTL+ D PP
Sbjct: 9 SVLPSLTSTLSSSKPSIPFNFKGFTKRVNNSGQILKAQTLEFSGSFFEGGFGGGNADEPP 68
Query: 282 SSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVE 461
++ SG++AVED E PQCPPGLR YETM VLRPDMSEDERLALTQKYEELLVAGGGMYVE
Sbjct: 69 TTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVE 128
Query: 462 VFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSMS 641
VFNRGVIPLA+SI++KNKAGETNTYLDGIYLLFTYFTKPESI LEATL DD+VIRS +
Sbjct: 129 VFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPESIVALEATLVADDDVIRSST 188
Query: 642 F 644
F
Sbjct: 189 F 189
>gb|ESQ28897.1| hypothetical protein EUTSA_v10023690mg [Eutrema salsugineum]
Length = 209
Score = 218 bits (554), Expect = 2e-54
Identities = 125/193 (64%), Positives = 137/193 (70%), Gaps = 9/193 (4%)
Frame = +3
Query: 93 PFCPKSF---SEFPSLSFTLKLFPAANSK----ALLFQKR-NGGITVKAQTLDXXXXXXX 248
P C S S P LSF+ L P + +L QKR N G VK+Q LD
Sbjct: 10 PICTHSLPNISSQPLLSFSHSLRPFISKSKPIASLQQQKRDNSGFVVKSQALDFSGTFFE 69
Query: 249 XXXXXXXXDPPSSTNSGL-TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYE 425
DP S++ SG+ TA+ED PQCPPGLRQYETMAVLRPDMSEDERL LTQKYE
Sbjct: 70 GGFGSDD-DPTSTSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYE 128
Query: 426 ELLVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEAT 605
ELLVAGGGMYVEVFNRGVIPLA+SI+KKNKAGETNTYLDGIYLLFTYFTKPESI LEA
Sbjct: 129 ELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLEAV 188
Query: 606 LKTDDNVIRSMSF 644
L DD++IRS SF
Sbjct: 189 LTADDDIIRSSSF 201
>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 216 bits (551), Expect = 4e-54
Identities = 122/180 (67%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Frame = +3
Query: 108 SFSEFPSLSFTLKLFPAANSKALLFQKRNG-GITVKAQTLDXXXXXXXXXXXXXXXDPPS 284
+FS P F A S+ KRN G +++AQTLD D PS
Sbjct: 36 AFSRTPKTLF-------AESRFHFHPKRNDYGFSIRAQTLDFSDSFFEGGFGSE--DVPS 86
Query: 285 STNS-GLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVE 461
S G TAVE+ E PQCPPGLRQYETM VLRPDMSEDERLALTQKYEE+LVAGGGMYVE
Sbjct: 87 SPGGPGFTAVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVE 146
Query: 462 VFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRSMS 641
VFNRGVIPLA+SIKKKNKAGETNTYLDGIYLLFTYFTKPESI LE T+ TDDNVIRSMS
Sbjct: 147 VFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMS 206
>gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 213 bits (542), Expect = 4e-53
Identities = 123/188 (65%), Positives = 136/188 (72%), Gaps = 6/188 (3%)
Frame = +3
Query: 99 CP-KSFSEFPSLSFTLKLFP-AANSKALL--FQKRNGG-ITVKAQTLDXXXXXXXXXXXX 263
CP + S P LSF+ L P + SK + QKR+G VK+Q LD
Sbjct: 37 CPLPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGGFGS 96
Query: 264 XXXDPPSSTNSGL-TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVA 440
DP S + SG+ TA+ED PQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVA
Sbjct: 97 DD-DPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVA 155
Query: 441 GGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDD 620
GGGMYVEVFNRGVIPLA+SI+KKNKAGETNTYLDGIYLLFTYFTKPESI LE L DD
Sbjct: 156 GGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADD 215
Query: 621 NVIRSMSF 644
++IRS SF
Sbjct: 216 DIIRSSSF 223
>ref|NP_176632.1| translation elongation factor EF1B/ribosomal protein S6 family
protein [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91.1|RR6_ARATH RecName: Full=30S
ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor gi|18252237|gb|AAL61951.1| plastid ribosomal
protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| translation elongation
factor EF1B/ribosomal protein S6 family protein
[Arabidopsis thaliana]
Length = 207
Score = 213 bits (542), Expect = 4e-53
Identities = 123/188 (65%), Positives = 136/188 (72%), Gaps = 6/188 (3%)
Frame = +3
Query: 99 CP-KSFSEFPSLSFTLKLFP-AANSKALL--FQKRNGG-ITVKAQTLDXXXXXXXXXXXX 263
CP + S P LSF+ L P + SK + QKR+G VK+Q LD
Sbjct: 13 CPLPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGGFGS 72
Query: 264 XXXDPPSSTNSGL-TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVA 440
DP S + SG+ TA+ED PQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVA
Sbjct: 73 DD-DPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVA 131
Query: 441 GGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDD 620
GGGMYVEVFNRGVIPLA+SI+KKNKAGETNTYLDGIYLLFTYFTKPESI LE L DD
Sbjct: 132 GGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADD 191
Query: 621 NVIRSMSF 644
++IRS SF
Sbjct: 192 DIIRSSSF 199
>gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus vulgaris]
Length = 214
Score = 212 bits (540), Expect = 7e-53
Identities = 115/183 (62%), Positives = 133/183 (72%), Gaps = 2/183 (1%)
Frame = +3
Query: 102 PKSFSEFPSLSFTL-KLFPAANSKALLFQKRNGG-ITVKAQTLDXXXXXXXXXXXXXXXD 275
P +F P +F+ F +A S+ K +G ++ AQTLD D
Sbjct: 26 PSTFPSSPIAAFSRGPKFLSAESRYHFHPKGSGSKFSITAQTLDFSDSFFEGGFGSED-D 84
Query: 276 PPSSTNSGLTAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMY 455
P S +G TAVE+ E P CPPGLRQYETM VLRPDM+EDERLALTQKYEE+LVAGGGMY
Sbjct: 85 PNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDMTEDERLALTQKYEEILVAGGGMY 144
Query: 456 VEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLKTDDNVIRS 635
VEVFNRGVIPLA++IKKKNKAGETNTYLDGIYLLFTYFTKPES++ LE T+ TDDNV RS
Sbjct: 145 VEVFNRGVIPLAYAIKKKNKAGETNTYLDGIYLLFTYFTKPESVKPLEETVLTDDNVFRS 204
Query: 636 MSF 644
+SF
Sbjct: 205 ISF 207
>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 211 bits (536), Expect = 2e-52
Identities = 123/191 (64%), Positives = 135/191 (70%), Gaps = 9/191 (4%)
Frame = +3
Query: 99 CP-KSFSEFPSLSFTLKLFP-AANSKALLF-----QKRNGG-ITVKAQTLDXXXXXXXXX 254
CP + S P LSF+ L P + SK + QKR+G VK+Q LD
Sbjct: 14 CPLPNVSSQPLLSFSHSLRPFISKSKPICASLQQQQKRDGSQFVVKSQALDFSGTFFEGG 73
Query: 255 XXXXXXDPPSSTNSGL-TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEEL 431
DP S SG+ TA+ED PQCPPGLRQYETMAVLRPDMSEDERL LTQKYEEL
Sbjct: 74 FGSDD-DPTSPPGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEEL 132
Query: 432 LVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLK 611
LVAGGGMYVEVFNRGVIPLA+SI+KKNKAGETNTYLDGIYLLFTYFTKPESI LE L
Sbjct: 133 LVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLT 192
Query: 612 TDDNVIRSMSF 644
DD++IRS SF
Sbjct: 193 ADDDIIRSSSF 203
>ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Capsella rubella]
gi|482569263|gb|EOA33451.1| hypothetical protein
CARUB_v10020948mg [Capsella rubella]
Length = 211
Score = 210 bits (535), Expect = 3e-52
Identities = 122/191 (63%), Positives = 137/191 (71%), Gaps = 8/191 (4%)
Frame = +3
Query: 96 FCPKSFSEFPSLSFTLKLFP-AANSKALLF-----QKRNGG-ITVKAQTLDXXXXXXXXX 254
F + S P LSF+ L P + SK + QKR+G + VK+Q LD
Sbjct: 14 FSLPNVSSRPLLSFSHSLRPFISKSKHVASIQQQPQKRDGSQLVVKSQALDFSGTFFEGG 73
Query: 255 XXXXXXDPPSSTNSGL-TAVEDAEAPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEEL 431
DP S + SG+ TA+ED PQCPPGLRQYETMAVLRPDMSEDERL LTQKYEEL
Sbjct: 74 FGSDD-DPISPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEEL 132
Query: 432 LVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEILEATLK 611
LVAGGGMYVEVFNRGVIPLA+SI+KKNKAGETNTYLDGIYLLFTYFT+PESI LEA L
Sbjct: 133 LVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTRPESITPLEAVLT 192
Query: 612 TDDNVIRSMSF 644
DD++IRS SF
Sbjct: 193 ADDDIIRSSSF 203
>ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cicer arietinum]
Length = 196
Score = 210 bits (534), Expect = 3e-52
Identities = 107/154 (69%), Positives = 118/154 (76%)
Frame = +3
Query: 180 FQKRNGGITVKAQTLDXXXXXXXXXXXXXXXDPPSSTNSGLTAVEDAEAPQCPPGLRQYE 359
++ N +V AQTLD D P + +G AVE+ E PQCPPGLRQYE
Sbjct: 37 YRNLNSAFSVNAQTLDFTGSFFEGGIGSG--DDPITPGTGFAAVEEKEEPQCPPGLRQYE 94
Query: 360 TMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYL 539
TMAVLRPDMSEDERLA TQKYEELLVAGGGMY+EVFNRGVIPLA+SIKKKNK GE+NTY+
Sbjct: 95 TMAVLRPDMSEDERLAFTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKEGESNTYM 154
Query: 540 DGIYLLFTYFTKPESIEILEATLKTDDNVIRSMS 641
DGIYLLFTYFTKPESI LEATL DDNV+RS S
Sbjct: 155 DGIYLLFTYFTKPESITALEATLLADDNVVRSTS 188
>sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal
protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 207 bits (526), Expect = 3e-51
Identities = 110/151 (72%), Positives = 117/151 (77%)
Frame = +3
Query: 192 NGGITVKAQTLDXXXXXXXXXXXXXXXDPPSSTNSGLTAVEDAEAPQCPPGLRQYETMAV 371
N G VKA LD DPPS+ +GL AVE+ PQCPPGLRQYETMAV
Sbjct: 12 NYGPYVKAIALDFSGSFFEGGFGGLDEDPPSTPPAGL-AVEEKPEPQCPPGLRQYETMAV 70
Query: 372 LRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAHSIKKKNKAGETNTYLDGIY 551
LRPDM+EDERL LTQKYEELLVAGG MYVEVFNRGVIPLA+SIK+KNKAGETN YLDGIY
Sbjct: 71 LRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIY 130
Query: 552 LLFTYFTKPESIEILEATLKTDDNVIRSMSF 644
LLFTYFTKPESI LEA L TDD+VIRS SF
Sbjct: 131 LLFTYFTKPESISPLEAALVTDDDVIRSSSF 161