BLASTX nr result

ID: Jatropha_contig00041208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00041208
         (391 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513546.1| nuclear movement protein nudc, putative [Ric...    74   2e-11
gb|ESR54313.1| hypothetical protein CICLE_v10021271mg [Citrus cl...    58   1e-06
gb|ESR54312.1| hypothetical protein CICLE_v10021271mg [Citrus cl...    58   1e-06
gb|ESR54311.1| hypothetical protein CICLE_v10021271mg [Citrus cl...    58   1e-06
gb|ESQ54469.1| hypothetical protein EUTSA_v10025870mg [Eutrema s...    57   3e-06
gb|EOY23533.1| HSP20-like chaperones superfamily protein isoform...    56   4e-06
gb|EOY23532.1| HSP20-like chaperones superfamily protein isoform...    56   4e-06
ref|XP_004145927.1| PREDICTED: nuclear migration protein nudC-li...    56   4e-06
ref|XP_003588525.1| Nuclear migration protein nudC [Medicago tru...    55   9e-06

>ref|XP_002513546.1| nuclear movement protein nudc, putative [Ricinus communis]
           gi|223547454|gb|EEF48949.1| nuclear movement protein
           nudc, putative [Ricinus communis]
          Length = 307

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXX-TLPFNATFDPSNPIGIVEKLFDFLVKETDFMAQD 255
           MAIISD+QE+E E             TLPFNATFDP NPIGIVEK+F+FL+ E+DFMA+D
Sbjct: 1   MAIISDYQEEEREMKPAASPSSSSSKTLPFNATFDPKNPIGIVEKVFEFLLTESDFMARD 60

Query: 256 T 258
           +
Sbjct: 61  S 61


>gb|ESR54313.1| hypothetical protein CICLE_v10021271mg [Citrus clementina]
          Length = 247

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXX--------TLPFNATFDPSNPIGIVEKLFDFLVKE 234
           MAIISDFQEDE++                    T  F+AT DPSNP+G +EK F+F+ KE
Sbjct: 1   MAIISDFQEDENKPDPKKNPSASASSSSPSSAKTSSFSATLDPSNPLGFLEKAFEFVAKE 60

Query: 235 TDFMAQD 255
           +DF+ +D
Sbjct: 61  SDFLTKD 67


>gb|ESR54312.1| hypothetical protein CICLE_v10021271mg [Citrus clementina]
          Length = 312

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXX--------TLPFNATFDPSNPIGIVEKLFDFLVKE 234
           MAIISDFQEDE++                    T  F+AT DPSNP+G +EK F+F+ KE
Sbjct: 1   MAIISDFQEDENKPDPKKNPSASASSSSPSSAKTSSFSATLDPSNPLGFLEKAFEFVAKE 60

Query: 235 TDFMAQD 255
           +DF+ +D
Sbjct: 61  SDFLTKD 67


>gb|ESR54311.1| hypothetical protein CICLE_v10021271mg [Citrus clementina]
          Length = 285

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXX--------TLPFNATFDPSNPIGIVEKLFDFLVKE 234
           MAIISDFQEDE++                    T  F+AT DPSNP+G +EK F+F+ KE
Sbjct: 1   MAIISDFQEDENKPDPKKNPSASASSSSPSSAKTSSFSATLDPSNPLGFLEKAFEFVAKE 60

Query: 235 TDFMAQD 255
           +DF+ +D
Sbjct: 61  SDFLTKD 67


>gb|ESQ54469.1| hypothetical protein EUTSA_v10025870mg [Eutrema salsugineum]
          Length = 295

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXXTLPFNATFDPSNPIGIVEKLFDFLVKETDFMAQDT 258
           MAIIS+ QE+               TLPF A+FDPSNP+G +EK+ DF+ KE++F+ +DT
Sbjct: 1   MAIISEMQEERPS------------TLPFRASFDPSNPLGFLEKVLDFIGKESNFLMKDT 48


>gb|EOY23533.1| HSP20-like chaperones superfamily protein isoform 2 [Theobroma
           cacao]
          Length = 258

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXXTLPFNATFDPSNPIGIVEKLFDFLVKETDFMAQD 255
           MAIISD+QE+E +            +  FNA+ DPSNP+G +EK+FDFL KETD + ++
Sbjct: 1   MAIISDYQEEEAKPSTSSSQPRKPVS--FNASLDPSNPVGFLEKVFDFLGKETDLLRKE 57


>gb|EOY23532.1| HSP20-like chaperones superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 295

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXXTLPFNATFDPSNPIGIVEKLFDFLVKETDFMAQD 255
           MAIISD+QE+E +            +  FNA+ DPSNP+G +EK+FDFL KETD + ++
Sbjct: 1   MAIISDYQEEEAKPSTSSSQPRKPVS--FNASLDPSNPVGFLEKVFDFLGKETDLLRKE 57


>ref|XP_004145927.1| PREDICTED: nuclear migration protein nudC-like [Cucumis sativus]
           gi|449525876|ref|XP_004169942.1| PREDICTED: nuclear
           migration protein nudC-like [Cucumis sativus]
          Length = 318

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXXTLP----------FNATFDPSNPIGIVEKLFDFLV 228
           MAIISD++E E E            + P          FNA+FDPSNP+G +EK+FDFL 
Sbjct: 1   MAIISDYEEKE-EIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLA 59

Query: 229 KETDFMAQD 255
            ETDF+++D
Sbjct: 60  NETDFLSKD 68


>ref|XP_003588525.1| Nuclear migration protein nudC [Medicago truncatula]
           gi|355477573|gb|AES58776.1| Nuclear migration protein
           nudC [Medicago truncatula]
          Length = 624

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 79  MAIISDFQEDEHEXXXXXXXXXXXXTLPFNATFDPSNPIGIVEKLFDFLVKE-TDFMAQD 255
           MAIISD+Q DE +            T+PF++TFDPS P   +EK+FDF+ KE TDF  +D
Sbjct: 1   MAIISDYQ-DETQTPSSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKD 59

Query: 256 T 258
           +
Sbjct: 60  S 60


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