BLASTX nr result

ID: Jatropha_contig00040992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040992
         (362 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM82472.1| cullin 1-like protein [Hevea brasiliensis]              92   7e-17
gb|ERP60304.1| hypothetical protein POPTR_0005s02800g [Populus t...    69   8e-10
ref|XP_002330206.1| predicted protein [Populus trichocarpa]            57   2e-06
ref|XP_002330205.1| predicted protein [Populus trichocarpa]            57   2e-06

>gb|AFM82472.1| cullin 1-like protein [Hevea brasiliensis]
          Length = 304

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 41/65 (63%), Positives = 55/65 (84%)
 Frame = +1

Query: 166 LDIPMTSEEGLKKIDDAVLRKKMIAEGRSVAPFTTAQNMEIYDCVYNLCTQKSKNYSEEI 345
           ++ P+T EEGLKKI+DA+ RK++I++ + V PFTTA+NM IYDCVY LCTQK +NY+E I
Sbjct: 5   MNTPLTLEEGLKKIEDAIARKRLISDAQCVTPFTTAENMLIYDCVYKLCTQK-RNYAEHI 63

Query: 346 YEKYL 360
           YEKY+
Sbjct: 64  YEKYV 68


>gb|ERP60304.1| hypothetical protein POPTR_0005s02800g [Populus trichocarpa]
          Length = 264

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = +1

Query: 166 LDIPMTSEEGLKKIDDAVLRKKMIAEGRSVAPFTTAQNMEIYDCVYNLCTQKSKNYSEEI 345
           +D  M   E LKKIDD + +KKMI +G  V PFT+A+ M  Y+CVY LCT+K ++    +
Sbjct: 3   IDADMMLNEKLKKIDDVITKKKMIMDGHPVIPFTSAEKMIAYECVYTLCTRKRRDSCSLV 62

Query: 346 YEKY 357
            EKY
Sbjct: 63  NEKY 66


>ref|XP_002330206.1| predicted protein [Populus trichocarpa]
          Length = 158

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
 Frame = +1

Query: 166 LDIPMTSEEGLKKIDDAVLRKKMIAEGRSVAPFTTAQNMEIYD-----CVYNLCTQKSKN 330
           +D+ M   E LK IDDA+ +KK I +     P T    M  Y+      VY LC QKS++
Sbjct: 1   MDVDMMLNEKLKMIDDAITKKKTIMDCHPEVPLTPTAKMNAYEYPATCSVYTLCNQKSRD 60

Query: 331 YSEEIYEKY 357
           YS  +YEKY
Sbjct: 61  YSNLLYEKY 69


>ref|XP_002330205.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
 Frame = +1

Query: 166 LDIPMTSEEGLKKIDDAVLRKKMIAEGRSVAPFTTAQNMEIYD-----CVYNLCTQKSKN 330
           +D+ M   E LK IDDA+ +KK I +     P T    M  Y+      VY LC QKS++
Sbjct: 1   MDVDMMLNEKLKMIDDAITKKKTIMDCHPEVPLTPTAKMNAYEYPATCSVYTLCNQKSRD 60

Query: 331 YSEEIYEKY 357
           YS  +YEKY
Sbjct: 61  YSNLLYEKY 69


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