BLASTX nr result

ID: Jatropha_contig00040952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040952
         (517 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative...    95   8e-18
gb|EEF04183.2| hypothetical protein POPTR_0017s11820g [Populus t...    80   3e-13
gb|EOY03440.1| ATP-dependent RNA helicase SUPV3L1 isoform 2 [The...    63   3e-08
gb|EOY03439.1| ATP-dependent RNA helicase SUPV3L1 isoform 1 [The...    63   3e-08
gb|EMJ18887.1| hypothetical protein PRUPE_ppa001533mg [Prunus pe...    63   4e-08
gb|ESR44360.1| hypothetical protein CICLE_v10011090mg [Citrus cl...    62   6e-08

>ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223536331|gb|EEF37981.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 820

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/109 (52%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = +1

Query: 187 MARGPFAFLFRACASKRNVYRARFSLSNQKFQSLRQLNNCALETHQFNPPFDVPFRQFST 366
           MARGP A LFRA ASK  + R R  L NQ F S RQ NN  L+++  + PFDV    FST
Sbjct: 1   MARGPVASLFRAYASKSKISRCRVFLYNQNFHSFRQFNNWVLQSYHLS-PFDVTCHHFST 59

Query: 367 SLIDVIHSQLPSKNM-NFTFSSPINGRNFCSSPLDGVDENSGSVELEEN 510
           S +D+I+SQLPS N   FT    IN R F S   DG ++NS + ELEEN
Sbjct: 60  SFVDLINSQLPSSNYPKFT----INWRTFSSFDQDGDNKNSANSELEEN 104


>gb|EEF04183.2| hypothetical protein POPTR_0017s11820g [Populus trichocarpa]
           gi|550320074|gb|ERP51114.1| hypothetical protein
           POPTR_0017s11820g [Populus trichocarpa]
          Length = 783

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = +1

Query: 286 LRQLNNCALETHQFNPPFDVPFRQFSTSLIDVIHSQLPSKNMNFTFSSPINGRNFCSSPL 465
           +RQ NN  LETHQF+  FDVP RQFSTSL+D+IHS  P KN  FT  +P + R F SS +
Sbjct: 1   MRQFNNWVLETHQFSTSFDVPCRQFSTSLVDIIHSHSPLKNPQFTIFNPADARPF-SSSV 59

Query: 466 DGVDENSGSVELEENSN 516
           D  DE+   V+L EN +
Sbjct: 60  D--DEDGNRVKLNENKS 74


>gb|EOY03440.1| ATP-dependent RNA helicase SUPV3L1 isoform 2 [Theobroma cacao]
          Length = 889

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
 Frame = +1

Query: 187 MARGPFAFLFRACASKRNVYRARFSLSNQKFQSLRQLNNCALETHQFNPPFDVPFRQFST 366
           M RG   FL R   S  NV R +F LSN+ F   RQ  N  L+  +F P FDVP R+FST
Sbjct: 1   MGRGLATFLLRIYTSNNNVSRVKFMLSNRYFHPFRQFENWVLDKDRFVPSFDVPKREFST 60

Query: 367 SLIDVIHSQLPSKNMNF-TFSSPI-NG-------RNFCSSPLDGVDENSGSVE 498
           SLI ++     S+ ++   FSS + NG       R    S ++G+ E    V+
Sbjct: 61  SLIGLVGKFRNSECVSVKPFSSVVENGDDDGGEDRGMRGSRMEGIKEGRNVVD 113


>gb|EOY03439.1| ATP-dependent RNA helicase SUPV3L1 isoform 1 [Theobroma cacao]
          Length = 852

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
 Frame = +1

Query: 187 MARGPFAFLFRACASKRNVYRARFSLSNQKFQSLRQLNNCALETHQFNPPFDVPFRQFST 366
           M RG   FL R   S  NV R +F LSN+ F   RQ  N  L+  +F P FDVP R+FST
Sbjct: 1   MGRGLATFLLRIYTSNNNVSRVKFMLSNRYFHPFRQFENWVLDKDRFVPSFDVPKREFST 60

Query: 367 SLIDVIHSQLPSKNMNF-TFSSPI-NG-------RNFCSSPLDGVDENSGSVE 498
           SLI ++     S+ ++   FSS + NG       R    S ++G+ E    V+
Sbjct: 61  SLIGLVGKFRNSECVSVKPFSSVVENGDDDGGEDRGMRGSRMEGIKEGRNVVD 113


>gb|EMJ18887.1| hypothetical protein PRUPE_ppa001533mg [Prunus persica]
          Length = 806

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = +1

Query: 187 MARGPFAFLFRACASKRNVYRARFSLSNQKFQSLRQLNNCALETHQFNPPFDVPFRQFST 366
           MARGP + LFR  ASK+++ R R  + NQ   S    +     +  F P FD P R+FST
Sbjct: 1   MARGPASSLFRLYASKKSISRFRVLVWNQYLSSAGSYDRSVSPSFPFCPAFDGPNRRFST 60

Query: 367 SLIDVIHSQLPSKNMNFTFSSPINGRNFCSSPLDG---VDENS 486
           SL D++  +LP ++  F  S  ++ + F ++  DG   V++NS
Sbjct: 61  SLRDLVRLRLPPQSPKFMGSDTLDAKPFSTALGDGDEDVNDNS 103


>gb|ESR44360.1| hypothetical protein CICLE_v10011090mg [Citrus clementina]
           gi|557533178|gb|ESR44361.1| hypothetical protein
           CICLE_v10011090mg [Citrus clementina]
          Length = 814

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/91 (43%), Positives = 45/91 (49%)
 Frame = +1

Query: 187 MARGPFAFLFRACASKRNVYRARFSLSNQKFQSLRQLNNCALETHQFNPPFDVPFRQFST 366
           MARG    LFR   SK NV R     SNQ F S  + +   LE +QF   FD   R+FS 
Sbjct: 1   MARGQATILFRIYRSKNNVSRVGALSSNQCFHSAGRCDKWVLEKNQFGLTFDGRKREFSA 60

Query: 367 SLIDVIHSQLPSKNMNFTFSSPINGRNFCSS 459
           SLID +   LPS N  F        R FCSS
Sbjct: 61  SLIDTVRFHLPSGNTRFI---EFKARPFCSS 88


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