BLASTX nr result

ID: Jatropha_contig00040719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040719
         (189 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516976.1| conserved hypothetical protein [Ricinus comm...    71   2e-10
ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|5...    70   4e-10
ref|XP_006353559.1| PREDICTED: mediator of RNA polymerase II tra...    69   5e-10
ref|XP_004251686.1| PREDICTED: mediator of RNA polymerase II tra...    68   1e-09
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...    68   1e-09
gb|EMJ03746.1| hypothetical protein PRUPE_ppa011158mg [Prunus pe...    67   2e-09
emb|CBI27822.3| unnamed protein product [Vitis vinifera]               66   5e-09
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...    66   5e-09
ref|XP_004240333.1| PREDICTED: mediator of RNA polymerase II tra...    65   7e-09
gb|EOY30294.1| TATA-binding related factor (TRF) of subunit 20 o...    65   9e-09
gb|ERN11228.1| hypothetical protein AMTR_s00024p00226210 [Ambore...    65   1e-08
gb|ESR41864.1| hypothetical protein CICLE_v10012695mg [Citrus cl...    64   2e-08
ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab...    64   2e-08
ref|XP_006293516.1| hypothetical protein CARUB_v10024033mg [Caps...    64   3e-08
gb|EPS64302.1| hypothetical protein M569_10471 [Genlisea aurea]        62   6e-08
ref|NP_180390.2| mediator of RNA polymerase II transcription sub...    62   6e-08
ref|XP_006295763.1| hypothetical protein CARUB_v10024884mg [Caps...    62   8e-08
ref|XP_004248866.1| PREDICTED: mediator of RNA polymerase II tra...    61   1e-07
emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]    61   1e-07
gb|ESQ51299.1| hypothetical protein EUTSA_v10017586mg [Eutrema s...    60   3e-07

>ref|XP_002516976.1| conserved hypothetical protein [Ricinus communis]
           gi|223544064|gb|EEF45590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAGTTVNTQILNEVSQCVESI
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVSQCVESI 32


>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|550336349|gb|ERP59438.1|
           hypothetical protein POPTR_0006s14580g [Populus
           trichocarpa]
          Length = 221

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAGTTVNTQILNEV+QCVESI
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVTQCVESI 32


>ref|XP_006353559.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum tuberosum]
          Length = 223

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAGTTVNTQIL EVSQCVESI
Sbjct: 1   MPIKWVLHWQPNAGTTVNTQILTEVSQCVESI 32


>ref|XP_004251686.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum lycopersicum]
          Length = 223

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAGTTVN+QIL EVSQCVESI
Sbjct: 1   MPIKWVLHWQPNAGTTVNSQILTEVSQCVESI 32


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAG+TVN+QILNEVSQCVESI
Sbjct: 1   MPLKWVLHWQPNAGSTVNSQILNEVSQCVESI 32


>gb|EMJ03746.1| hypothetical protein PRUPE_ppa011158mg [Prunus persica]
          Length = 221

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPNAGTTVN+QI+NEV+QCVESI
Sbjct: 1   MPLKWVLHWQPNAGTTVNSQIINEVTQCVESI 32


>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWV HWQPNAGTTVN+Q++NEVSQCVESI
Sbjct: 1   MPLKWVFHWQPNAGTTVNSQMINEVSQCVESI 32


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWV HWQPNAGTTVN+Q++NEVSQCVESI
Sbjct: 1   MPLKWVFHWQPNAGTTVNSQMINEVSQCVESI 32


>ref|XP_004240333.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum lycopersicum]
          Length = 222

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KW+LHW+PNAGT+VNTQIL E+SQCVESI
Sbjct: 1   MPIKWILHWRPNAGTSVNTQILTEISQCVESI 32


>gb|EOY30294.1| TATA-binding related factor (TRF) of subunit 20 of Mediator complex
           [Theobroma cacao]
          Length = 222

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVL+WQPNAG+TVN+QILNEVSQCVESI
Sbjct: 1   MPLKWVLNWQPNAGSTVNSQILNEVSQCVESI 32


>gb|ERN11228.1| hypothetical protein AMTR_s00024p00226210 [Amborella trichopoda]
          Length = 216

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKW+LHWQPNAGTT+N+Q+L EVSQCVE I
Sbjct: 1   MPVKWLLHWQPNAGTTINSQVLTEVSQCVEGI 32


>gb|ESR41864.1| hypothetical protein CICLE_v10012695mg [Citrus clementina]
          Length = 222

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           M +KWVLHWQPN GT+VN+QILNEVSQCVESI
Sbjct: 1   MTIKWVLHWQPNVGTSVNSQILNEVSQCVESI 32


>ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp.
           lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein
           ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKWVLHWQPN G+TV++QILNEV+QCVESI
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEVTQCVESI 32


>ref|XP_006293516.1| hypothetical protein CARUB_v10024033mg [Capsella rubella]
           gi|565471430|ref|XP_006293517.1| hypothetical protein
           CARUB_v10024033mg [Capsella rubella]
           gi|482562224|gb|EOA26414.1| hypothetical protein
           CARUB_v10024033mg [Capsella rubella]
           gi|482562225|gb|EOA26415.1| hypothetical protein
           CARUB_v10024033mg [Capsella rubella]
          Length = 219

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKWVLHWQPN G+TV++QILNE SQCVESI
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEASQCVESI 32


>gb|EPS64302.1| hypothetical protein M569_10471 [Genlisea aurea]
          Length = 359

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVES 185
           MP+KW+LHWQPN G TVNTQIL+EVSQC ES
Sbjct: 1   MPIKWILHWQPNPGATVNTQILSEVSQCAES 31


>ref|NP_180390.2| mediator of RNA polymerase II transcription subunit 20a
           [Arabidopsis thaliana]
           gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis
           thaliana] gi|38604010|gb|AAR24748.1| At2g28230
           [Arabidopsis thaliana] gi|330252999|gb|AEC08093.1|
           mediator of RNA polymerase II transcription subunit 20a
           [Arabidopsis thaliana]
          Length = 219

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKWVLHWQPN G+TV++QILNE +QCVESI
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEATQCVESI 32


>ref|XP_006295763.1| hypothetical protein CARUB_v10024884mg [Capsella rubella]
           gi|482564471|gb|EOA28661.1| hypothetical protein
           CARUB_v10024884mg [Capsella rubella]
          Length = 219

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MP+KWVLHWQPN G+TV++QILNE S+CVESI
Sbjct: 1   MPIKWVLHWQPNQGSTVSSQILNEASECVESI 32


>ref|XP_004248866.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum lycopersicum]
          Length = 215

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKWVL WQPNAGTT+N+QIL EVS+CVESI
Sbjct: 1   MPVKWVLCWQPNAGTTINSQILIEVSECVESI 32


>emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]
          Length = 242

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +3

Query: 60  TSAIFQFSQQTMPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           T  + + +Q    + WV HWQPNAGTTVN+Q++NEVSQCVESI
Sbjct: 9   TQLLSRLAQLXCRLSWVFHWQPNAGTTVNSQMINEVSQCVESI 51


>gb|ESQ51299.1| hypothetical protein EUTSA_v10017586mg [Eutrema salsugineum]
          Length = 207

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +3

Query: 93  MPVKWVLHWQPNAGTTVNTQILNEVSQCVESI 188
           MPVKWVL+WQPN G+TV++QILNE +QCVESI
Sbjct: 1   MPVKWVLYWQPNQGSTVSSQILNEATQCVESI 32


Top