BLASTX nr result
ID: Jatropha_contig00040633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00040633
(478 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 95 1e-17
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 92 9e-17
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-14
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
gb|ESR53167.1| hypothetical protein CICLE_v10019266mg [Citrus cl... 77 2e-12
gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus... 76 4e-12
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 75 8e-12
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 72 5e-11
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus... 72 9e-11
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar... 68 1e-09
gb|ESQ45735.1| hypothetical protein EUTSA_v10010209mg [Eutrema s... 68 1e-09
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ... 66 5e-09
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps... 62 6e-08
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = +2
Query: 257 FLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKA 436
++N H+ +Y SSKP SLVELL NDW +P LTHETV+YVL+KLDK P KA
Sbjct: 50 YVNIHKKLYSSSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKA 109
Query: 437 WDFFNWVSERNEFK 478
WDFFNWV +RN FK
Sbjct: 110 WDFFNWVCDRNGFK 123
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = +2
Query: 257 FLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKA 436
FLN+HQ ++FSS P S+++L+L N W P LTH+ V+YVL+KLDK P KA
Sbjct: 69 FLNTHQSLFFSSAPNSVLQLVLANQWSAELENELSESYPSLTHDAVIYVLKKLDKDPKKA 128
Query: 437 WDFFNWVSERNEFK 478
WDFFNWV E+N FK
Sbjct: 129 WDFFNWVCEKNGFK 142
>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Frame = +2
Query: 206 FASPPSLHIFPLSS---LILFLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPR 376
F+S PS + L L F N+HQ +YFSSKP S++EL+ NDW
Sbjct: 33 FSSSPSFSLPLLCRSHYLSPFHNTHQKLYFSSKPHSILELVYSNDWSQDLEHELENCRSS 92
Query: 377 LTHETVVYVLRKLDKYPDKAWDFFNWVSERNEF 475
LTHETVVYVL++LDK P+KA+ FFNWVS++ F
Sbjct: 93 LTHETVVYVLKRLDKNPEKAFSFFNWVSKKEWF 125
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2
Query: 278 VYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWV 457
++FSSKP S+VEL+L NDW + LTHETV+YVL+KLDK P + W+FFNWV
Sbjct: 59 LFFSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWV 118
Query: 458 SERNEFK 478
+E+N F+
Sbjct: 119 TEKNGFR 125
>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 82.4 bits (202), Expect = 5e-14
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +2
Query: 254 LFLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDK 433
L N HQ +YFSSKP S+VEL+L +DW P +THETVVYVL++++ P+K
Sbjct: 54 LLPNIHQNLYFSSKPNSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEANPEK 113
Query: 434 AWDFFNWVSERNEFK 478
AW FFNWVS + ++
Sbjct: 114 AWCFFNWVSAKEWYR 128
>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +2
Query: 218 PSLHIFPLSSLILFLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVV 397
PS ++ S + F +H +++FSS P SL++L+ NDW NP LTHETVV
Sbjct: 32 PSSYVSHQSLVSHFTINHPVLFFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVV 91
Query: 398 YVLRKLDKYPDKAWDFFNWVSERN 469
YVL++LDK P KA +FFNW S +N
Sbjct: 92 YVLKRLDKQPQKASEFFNWASGKN 115
>gb|ESR53167.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Frame = +2
Query: 227 HIFPLSSLILFLNSH---------QMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRL 379
H F +SS SH Q ++FS+ P S +EL+L DW +P+L
Sbjct: 34 HFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELENKLEELSPKL 93
Query: 380 THETVVYVLRKLDKYPDKAWDFFNWVSERNEFK 478
THE+VVYVLRKLD P+KA FFNWV ++ +F+
Sbjct: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFR 126
>gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus vulgaris]
Length = 636
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +2
Query: 152 THSSQLGSPLPDHF*LR*FASPPSL---HIFPLSSLILFLNSHQMVYFSSKPGSLVELLL 322
T S QL HF L + P L H FP F N H+ +YFSSKP + EL+
Sbjct: 25 TRSIQLTQNQVTHFSL--YTPSPLLDHSHNFP------FPNIHRKLYFSSKPNPIPELIF 76
Query: 323 GNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWVSERNEFK 478
+ W P LTHETVVY+L++L+ P+KAW FF+WVS + F+
Sbjct: 77 TSHWSKGLEHELEKCYPSLTHETVVYILKRLEANPEKAWCFFDWVSTKKWFR 128
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 75.1 bits (183), Expect = 8e-12
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2
Query: 257 FLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKA 436
FLN+ Q + FSS P S+++L+L N W + LTH+ V+YVL+KL+K P KA
Sbjct: 51 FLNTRQSLTFSSTPNSVLQLVLSNQWSPELETELSESHLSLTHDVVIYVLKKLNKDPAKA 110
Query: 437 WDFFNWVSERNEF 475
W FFNWV E+ F
Sbjct: 111 WSFFNWVCEKKGF 123
>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 635
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/87 (48%), Positives = 49/87 (56%)
Frame = +2
Query: 218 PSLHIFPLSSLILFLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVV 397
P L FP L L HQ FSSKP S+VEL+L N W P LTHETVV
Sbjct: 45 PLLSPFPFHDLRL----HQKRCFSSKPNSVVELVLTNVWSQGLEHELEKCYPSLTHETVV 100
Query: 398 YVLRKLDKYPDKAWDFFNWVSERNEFK 478
Y+L++L+K P KA FFNWV + FK
Sbjct: 101 YILKQLEKDPQKASCFFNWVIRKKWFK 127
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 72.4 bits (176), Expect = 5e-11
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +2
Query: 224 LHIFPLSSLILFLNSHQMVYFSSKP--GSLVELLLGNDWXXXXXXXXXXXNPRLTHETVV 397
L +F S + F +H +YFS+KP S+VELLL NDW P + HETV+
Sbjct: 38 LPLFDRSHHLRFPITHHKLYFSTKPKPNSIVELLLTNDWSQALELKLENRFPSMPHETVL 97
Query: 398 YVLRKLDKYPDKAWDFFNWVSERNEFK 478
YV+++LDK P+KA FFNWV ++ F+
Sbjct: 98 YVIKRLDKNPEKASCFFNWVCKKVWFR 124
>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
Length = 631
Score = 71.6 bits (174), Expect = 9e-11
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +2
Query: 242 SSLILFLNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDK 421
S + F +H+ ++FS+ P S+VEL+ NDW P ++HETV+YV+++LDK
Sbjct: 44 SHFLQFPITHRSLHFSTNPSSIVELVSTNDWSQALELNLENSCPSMSHETVIYVIKRLDK 103
Query: 422 YPDKAWDFFNWVSERNEFK 478
P+KA FFNWV +++ F+
Sbjct: 104 NPEKASCFFNWVIKKDWFR 122
>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 642
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +2
Query: 260 LNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAW 439
L + Q V+FSSK S V+++L NDW + +THE V+Y+L+KLDK P KA
Sbjct: 53 LGASQNVFFSSKTESFVDIILSNDWSKQLEKDLGKNDLPVTHEAVMYLLKKLDKEPQKAG 112
Query: 440 DFFNWVSERNEFK 478
DF WV ++N FK
Sbjct: 113 DFLKWVVKQNGFK 125
>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/100 (40%), Positives = 53/100 (53%)
Frame = +2
Query: 158 SSQLGSPLPDHF*LR*FASPPSLHIFPLSSLILFLNSHQMVYFSSKPGSLVELLLGNDWX 337
SS L SPL FA PS ++ + FSSKP S+++L+L NDW
Sbjct: 32 SSNLSSPLDS------FAIVPSRFLWKFRT------------FSSKPDSMLQLVLENDWS 73
Query: 338 XXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWV 457
+ LTHET +YVLRKL+KYP+KA+ F +WV
Sbjct: 74 KEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWV 113
>gb|ESQ45735.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
Length = 617
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +2
Query: 284 FSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWV 457
FSSKP S+++L++ NDW + LTHET +YVLRKLDK+PDKA+ F +WV
Sbjct: 55 FSSKPESMLQLVVENDWSREVEEGLKKPDMPLTHETAIYVLRKLDKHPDKAYSFLDWV 112
>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 260 LNSHQMVYFSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAW 439
L S Q V+FSSK S V+++L NDW + +THE V+Y+L+KLDK P KA
Sbjct: 53 LGSSQNVFFSSKTESFVDIILSNDWSKQLEKDLGKNDFPVTHEAVMYLLKKLDKEPRKAG 112
Query: 440 DFFNWVSERNEFK 478
DF WV ++ FK
Sbjct: 113 DFLKWVVKQKGFK 125
>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323443|gb|EFH53864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2
Query: 284 FSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWV 457
FSSKP S ++L+L NDW + LTHET +YVLRKL+KYP+KA+ F +WV
Sbjct: 55 FSSKPDSTLQLVLENDWSKEVEEGLRKPDLSLTHETAIYVLRKLEKYPEKAYYFLDWV 112
>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
gi|565465717|ref|XP_006290750.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559456|gb|EOA23647.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559457|gb|EOA23648.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
Length = 618
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +2
Query: 284 FSSKPGSLVELLLGNDWXXXXXXXXXXXNPRLTHETVVYVLRKLDKYPDKAWDFFNWV 457
F+S P S+++L+L NDW + LTHET +YVLRKL+K PDKA+ F +WV
Sbjct: 55 FASNPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKNPDKAYCFIDWV 112