BLASTX nr result
ID: Jatropha_contig00040578
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00040578
(501 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524072.1| ribonucleoprotein, chloroplast, putative [Ri... 77 3e-12
gb|EOY08505.1| Chloroplast RNA-binding protein 33 [Theobroma cacao] 74 1e-11
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c... 73 4e-11
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum] 73 4e-11
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s... 73 4e-11
gb|EEE92780.2| hypothetical protein POPTR_0006s21650g [Populus t... 72 7e-11
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 72 7e-11
ref|XP_002309257.1| predicted protein [Populus trichocarpa] 72 7e-11
ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 72 9e-11
ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 72 9e-11
gb|AFK49291.1| unknown [Lotus japonicus] 72 9e-11
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 70 2e-10
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 70 3e-10
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise... 70 4e-10
gb|ESQ45262.1| hypothetical protein EUTSA_v10010548mg [Eutrema s... 69 5e-10
ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Caps... 69 6e-10
ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group] g... 69 6e-10
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera] 69 6e-10
ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis... 69 8e-10
gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis ... 69 8e-10
>ref|XP_002524072.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223536640|gb|EEF38282.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 190
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/89 (51%), Positives = 50/89 (56%)
Frame = +1
Query: 235 AFDSTEVPQDDRQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLFVGNLPYSMT 414
AFDS EV QDD+ S GRL+VGNLPYSMT
Sbjct: 72 AFDSFEVDQDDKISARDDLQSEPEELGQEIEEEKEFVPVESNDE---GRLYVGNLPYSMT 128
Query: 415 SSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
SS+LTEV QEAG V NV+IIYDRVTDRSR
Sbjct: 129 SSELTEVMQEAGSVANVEIIYDRVTDRSR 157
>gb|EOY08505.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]
Length = 340
Score = 74.3 bits (181), Expect = 1e-11
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLPYSMTSS+L+E+F EAG+V NV+I+YDRVTDRSR
Sbjct: 130 GRLYVGNLPYSMTSSELSEIFNEAGRVANVEIVYDRVTDRSR 171
>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
precursor - common tobacco gi|20005|emb|CAA37879.1|
unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+SMTSSQL+E+F EAG V NV+I+YDRVTDRSR
Sbjct: 114 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSR 155
>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+SMTSSQL+E+F EAG V NV+I+YDRVTDRSR
Sbjct: 103 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSR 144
>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+SMTSSQL+E+F EAG V NV+I+YDRVTDRSR
Sbjct: 109 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSR 150
>gb|EEE92780.2| hypothetical protein POPTR_0006s21650g [Populus trichocarpa]
Length = 326
Score = 72.0 bits (175), Expect = 7e-11
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
G+L+VGNLPYSMTSS+LTEVF+EAG+V + ++IYDRVTDRSR
Sbjct: 118 GKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSR 159
>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 72.0 bits (175), Expect = 7e-11
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
G+L++GNLPY+MTSSQL+EVF EAG VV+VQ+IYD+VTDRSR
Sbjct: 115 GKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSR 156
>ref|XP_002309257.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 72.0 bits (175), Expect = 7e-11
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
G+L+VGNLPYSMTSS+LTEVF+EAG+V + ++IYDRVTDRSR
Sbjct: 113 GKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSR 154
>ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 329
Score = 71.6 bits (174), Expect = 9e-11
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+SMT SQL+E+F EAG+V NV+I+YDRVTDRSR
Sbjct: 122 GRLYVGNLPFSMTPSQLSEIFTEAGKVANVEIVYDRVTDRSR 163
>ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 328
Score = 71.6 bits (174), Expect = 9e-11
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+SMT SQL+E+F EAG+V NV+I+YDRVTDRSR
Sbjct: 126 GRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYDRVTDRSR 167
>gb|AFK49291.1| unknown [Lotus japonicus]
Length = 162
Score = 71.6 bits (174), Expect = 9e-11
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1
Query: 379 RLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
RL+VGNLPYSMTSSQLTE+F EAG VV+V+++YDRVTDRSR
Sbjct: 112 RLYVGNLPYSMTSSQLTEIFVEAGTVVSVEVMYDRVTDRSR 152
>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 318
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+S+TSSQL E+F EAG VV+V+I+YDRVTDRSR
Sbjct: 108 GRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSR 149
>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 379 RLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
RL+VGNLPYSMTSSQL +VF EAG V++V+I+YDRVTDRSR
Sbjct: 104 RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSR 144
>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
Length = 204
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/42 (73%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLP+S+TS+QL+E+F EAG VV+V+I+YDRVTDRSR
Sbjct: 12 GRLYVGNLPFSITSAQLSEIFSEAGGVVSVEIVYDRVTDRSR 53
>gb|ESQ45262.1| hypothetical protein EUTSA_v10010548mg [Eutrema salsugineum]
Length = 322
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/42 (73%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLPY++TSS+L+E+F EAG VV+VQI+YD+VTDRSR
Sbjct: 111 GRLYVGNLPYTITSSELSELFGEAGNVVDVQIVYDKVTDRSR 152
>ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Capsella rubella]
gi|482560889|gb|EOA25080.1| hypothetical protein
CARUB_v10018388mg [Capsella rubella]
Length = 342
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/42 (69%), Positives = 41/42 (97%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLPY++TSS+L+++F EAG++V+VQI+YD+VTDRSR
Sbjct: 120 GRLYVGNLPYTITSSELSQIFGEAGKIVDVQIVYDKVTDRSR 161
>ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein
[Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa
Japonica Group] gi|125557292|gb|EAZ02828.1| hypothetical
protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 348
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRLFVGNLPY+MTS ++++ F EAG+V NVQIIYD+VTDRSR
Sbjct: 118 GRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSR 159
>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 379 RLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
RL+VGNLPYSMTSSQL VF EAG V++V+I+YDRVTDRSR
Sbjct: 247 RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSR 287
>ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|4886289|emb|CAB43448.1|
RNA-binding protein cp33 precursor [Arabidopsis
thaliana] gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240
[Arabidopsis thaliana] gi|18700226|gb|AAL77723.1|
AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|332645419|gb|AEE78940.1|
chloroplast RNA-binding protein 33 [Arabidopsis
thaliana]
Length = 329
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLPY++TSS+L+++F EAG VV+VQI+YD+VTDRSR
Sbjct: 116 GRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSR 157
>gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = +1
Query: 376 GRLFVGNLPYSMTSSQLTEVFQEAGQVVNVQIIYDRVTDRSR 501
GRL+VGNLPY++TSS+L+++F EAG VV+VQI+YD+VTDRSR
Sbjct: 116 GRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSR 157