BLASTX nr result

ID: Jatropha_contig00040218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040218
         (297 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF02311.2| hypothetical protein POPTR_0010s17670g [Populus t...    60   4e-07
ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...    60   4e-07
emb|CBI27448.3| unnamed protein product [Vitis vinifera]               57   3e-06

>gb|EEF02311.2| hypothetical protein POPTR_0010s17670g [Populus trichocarpa]
          Length = 311

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = +1

Query: 73  TLRDFLQPAKRIKVSSS----VEPSNPLNHQFNPIPXXXXXXXXXXALTAVQRSRIEFDK 240
           T+ DFLQPAKR+K+SSS    ++P N LN   +              LT  Q SRIE +K
Sbjct: 7   TIMDFLQPAKRLKLSSSSPSPIDPLNLLNKSLSA-------KSTSTDLTPDQVSRIELNK 59

Query: 241 LRARAKRKLNLCLQLVSKS 297
           LRA++KR L LC QLVS S
Sbjct: 60  LRAKSKRNLKLCSQLVSNS 78


>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
 Frame = +1

Query: 73  TLRDFLQPAKRIKVS-----SSVEPSNP---------LNHQFNPIPXXXXXXXXXXALTA 210
           TL D+LQP+KR+KVS     SS   S+P         L+H  +  P          ALTA
Sbjct: 6   TLMDYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPSSALTA 65

Query: 211 VQRSRIEFDKLRARAKRKLNLCLQLVSKS 297
            Q+SRIEF+K  A++KR L +C Q VSKS
Sbjct: 66  HQKSRIEFNKFLAKSKRNLTICSQKVSKS 94


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
 Frame = +1

Query: 82  DFLQPAKRIKVS-----SSVEPSNP---------LNHQFNPIPXXXXXXXXXXALTAVQR 219
           D+LQP+KR+KVS     SS   S+P         L+H  +  P          ALTA Q+
Sbjct: 2   DYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPSSALTAHQK 61

Query: 220 SRIEFDKLRARAKRKLNLCLQLVSKS 297
           SRIEF+K  A++KR L +C Q VSKS
Sbjct: 62  SRIEFNKFLAKSKRNLTICSQKVSKS 87


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