BLASTX nr result

ID: Jatropha_contig00040075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040075
         (606 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...    60   4e-07

>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = +2

Query: 401 LVVCSYSATSPSSYEKKHWKKGEFPGITETFAPRKQPIKNTSPSSSEKKHWKKGEFPGIT 580
           LV+C+Y+ TS S  +KKHWK+GEFPG TET  PR+ PIKN      ++K+  K     +T
Sbjct: 41  LVLCAYAPTSTSP-KKKHWKQGEFPGFTETSPPRRTPIKNIK-KKLDRKNKAKAWVNTVT 98

Query: 581 ETFAPR 598
           E  + R
Sbjct: 99  EALSDR 104


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