BLASTX nr result

ID: Jatropha_contig00040056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00040056
         (589 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326247.1| predicted protein [Populus trichocarpa] gi|5...    57   3e-06
ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251...    56   8e-06

>ref|XP_002326247.1| predicted protein [Populus trichocarpa] gi|550336014|gb|ERP59109.1|
           hypothetical protein POPTR_0006s11670g [Populus
           trichocarpa]
          Length = 129

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 354 MESTRRSFDRSREPGLKKP*LADQQPNLNGRPF 452
           MESTRRSFDRSREPGLKKP LA++Q N  GRPF
Sbjct: 1   MESTRRSFDRSREPGLKKPRLAEEQANHKGRPF 33


>ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251089 [Vitis vinifera]
          Length = 801

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
 Frame = +3

Query: 348 MEMESTRRSFDRSREPGLKKP*LADQQ---PNLNGRPF 452
           MEMES+RRSFDRSREPG KKP LA++    PN NGRPF
Sbjct: 1   MEMESSRRSFDRSREPGFKKPRLAEEAERGPNPNGRPF 38


Top