BLASTX nr result
ID: Jatropha_contig00040018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00040018
(360 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 99 4e-19
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 92 5e-17
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 89 7e-16
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 87 2e-15
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 87 3e-15
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 86 4e-15
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind... 85 8e-15
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 85 8e-15
ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containin... 85 1e-14
gb|EEE82111.2| RNA recognition motif-containing family protein [... 84 1e-14
ref|XP_002302838.1| predicted protein [Populus trichocarpa] 84 1e-14
gb|ERM99613.1| hypothetical protein AMTR_s00088p00158600 [Ambore... 77 2e-12
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe... 74 1e-11
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 74 2e-11
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 74 2e-11
ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Caps... 72 5e-11
ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containin... 72 9e-11
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-10
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-10
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-10
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 99.4 bits (246), Expect = 4e-19
Identities = 49/57 (85%), Positives = 54/57 (94%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDFTESTKVVY++IQKLEPENV+KIIGYLLLQD +EREMIRLAF PDN IYSLI+KA
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKA 57
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQK+EPENV+KIIGYLLLQD ER+MIRLAF PDN I SLI+KA
Sbjct: 1 MDFSESTKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKA 57
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 88.6 bits (218), Expect = 7e-16
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +2
Query: 182 SEMDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
++MDF+ESTKVVY++IQKLEPENV+KIIGYLLLQD ER+MIR AF DN+I LI+KA
Sbjct: 12 TDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKA 70
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQKLEPENV+KIIGYLLLQD ER+MIR AF DN+I LI+KA
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKA 57
>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
RNA recognition motif-containing family protein [Populus
trichocarpa]
Length = 554
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQ++EPE V KIIGY+LLQ+ EREMIRLAF PDN IY+ ISKA
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKA 57
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVYS+IQKL+PENV KIIG LLLQ+ ER MIRLAF PDN I S+I+KA
Sbjct: 1 MDFSESTKVVYSRIQKLDPENVGKIIGILLLQEHGERNMIRLAFSPDNLIQSVINKA 57
>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
Length = 430
Score = 85.1 bits (209), Expect = 8e-15
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDFTESTKVVY++IQ+LEPENV+KIIGY LLQD+ +R+MIRLAF D + SLI+KA
Sbjct: 1 MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKA 57
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 85.1 bits (209), Expect = 8e-15
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDFTESTKVVY++IQ+LEPENV+KIIGY LLQD+ +R+MIRLAF D + SLI+KA
Sbjct: 1 MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKA 57
>ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Solanum tuberosum]
gi|565394754|ref|XP_006363021.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X2
[Solanum tuberosum]
Length = 531
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQKLE E+V+KIIGYLL +D E++MIRLAF PDN I+SLI+KA
Sbjct: 3 MDFSESTKVVYNRIQKLESEHVSKIIGYLLYRDHGEQDMIRLAFCPDNVIHSLINKA 59
>gb|EEE82111.2| RNA recognition motif-containing family protein [Populus
trichocarpa]
Length = 391
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQ +EPE V KIIGY+L+Q+ EREMIRLAF PDN IY++I KA
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKA 57
>ref|XP_002302838.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+ESTKVVY++IQ +EPE V KIIGY+L+Q+ EREMIRLAF PDN IY++I KA
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKA 57
>gb|ERM99613.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +2
Query: 185 EMDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
EMDF EST+ V+S+IQKLEPENV+KI+GYLLL+D EREM LA PD+ I SLI+KA
Sbjct: 9 EMDF-ESTRTVFSRIQKLEPENVSKIVGYLLLRDNGEREMNELAVCPDSLIISLINKA 65
>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 74.3 bits (181), Expect = 1e-11
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+E T VYS+IQKLEP+N KIIGYLLLQD E+EM RLA P++ I+ +I KA
Sbjct: 1 MDFSEYTNAVYSRIQKLEPDNATKIIGYLLLQDYGEQEMARLAMAPEHLIHQVIVKA 57
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MD E+T++V+S+IQ L+PEN +KI+GYLL+QD E+EMIRLAF P+ I+SLI KA
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKA 57
>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein,
putative [Ricinus communis]
Length = 551
Score = 73.6 bits (179), Expect = 2e-11
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MDF+E T+VV++KI+K+EPENV KIIGYLLLQD +++EMI LA PD I +I KA
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKA 57
>ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Capsella rubella]
gi|482566090|gb|EOA30279.1| hypothetical protein
CARUB_v10013406mg [Capsella rubella]
Length = 539
Score = 72.4 bits (176), Expect = 5e-11
Identities = 36/56 (64%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLL-QDRAEREMIRLAFIPDNSIYSLIS 352
M+FTES VV+ +IQ+LEPEN +KIIGYLLL QD +R+MIRLAF PD+ I+S+I+
Sbjct: 1 MNFTESMNVVHKRIQELEPENASKIIGYLLLMQDNGDRDMIRLAFCPDSVIHSVIN 56
>ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Solanum lycopersicum]
Length = 532
Score = 71.6 bits (174), Expect = 9e-11
Identities = 34/57 (59%), Positives = 48/57 (84%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
M+F+EST+ VY++IQKLEP++VNKII YL+ Q E++MIRLAF P+N I S+++KA
Sbjct: 3 MNFSESTRDVYNRIQKLEPDHVNKIIVYLIDQHHGEQDMIRLAFSPENVIRSIVNKA 59
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MD E+TK+V S+IQ L+PEN +KI+GY+L+QD+ E+EMIRLAF P+ + SLI++A
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQA 57
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MD E+TK+V S+IQ L+PEN +KI+GY+L+QD+ E+EMIRLAF P+ + SLI++A
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQA 57
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Solanum tuberosum]
Length = 701
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 188 MDFTESTKVVYSKIQKLEPENVNKIIGYLLLQDRAEREMIRLAFIPDNSIYSLISKA 358
MD E+TK+V S+IQ L+PEN +KI+GY+L+QD+ E+EMIRLAF P+ + SLI++A
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQA 57