BLASTX nr result
ID: Jatropha_contig00039847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00039847
(616 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 160 3e-37
gb|ERP60549.1| 5'-3' exoribonuclease family protein [Populus tri... 156 4e-36
ref|XP_002328516.1| predicted protein [Populus trichocarpa] 156 4e-36
gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus pe... 152 7e-35
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra... 150 2e-34
gb|ERP48233.1| 5'-3' exoribonuclease family protein [Populus tri... 150 3e-34
ref|XP_002319052.1| predicted protein [Populus trichocarpa] 150 3e-34
gb|ESR46297.1| hypothetical protein CICLE_v10000168mg [Citrus cl... 149 6e-34
gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlise... 149 6e-34
gb|ERM93513.1| hypothetical protein AMTR_s00004p00046450 [Ambore... 148 1e-33
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 148 1e-33
ref|XP_004494674.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cic... 147 2e-33
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 147 2e-33
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 147 2e-33
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly... 147 3e-33
gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao] 146 5e-33
ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula] ... 143 3e-32
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ... 143 3e-32
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ... 142 5e-32
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops... 142 5e-32
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 160 bits (404), Expect = 3e-37
Identities = 71/80 (88%), Positives = 76/80 (95%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPLAIVDVVEEEPKED+NGV PID+S+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+GKP PPTYD VFK
Sbjct: 61 HPCFHPDGKPPPPTYDDVFK 80
Score = 97.8 bits (242), Expect = 2e-18
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 348 SLRLQLMMLSSNLPNQFEQNLGPLPSPPTNWIGKGAG-DADMYFRQEAVQRSANEKQVKQ 524
S R Q SS+L QFEQNLG LPSPP WIGK DA+MYFRQE + R ANEKQ KQ
Sbjct: 881 SQRTQNTGYSSSLQQQFEQNLGALPSPPAKWIGKATDTDAEMYFRQETMLRGANEKQAKQ 940
Query: 525 VYQIKTRAAQETSHLVTREASDLNQQ 602
+YQ+KTRAAQE S+ ++ SD+N Q
Sbjct: 941 IYQVKTRAAQEMSN--PQQISDVNHQ 964
>gb|ERP60549.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
Length = 948
Score = 156 bits (395), Expect = 4e-36
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+IVDV+EEEP+ED+NG S PIDVS+PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80
Score = 98.2 bits (243), Expect = 2e-18
Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 375 SSNLPNQFEQNLGPLPSPPTNWIGK-GAGDADMYFRQEAVQRSANEKQVKQVYQIKTRAA 551
++NL NQFE N GPLPSPPTNWI K AGDA MYFRQ+ R NEKQ+KQVYQ+KT+ A
Sbjct: 878 TTNLYNQFEHNTGPLPSPPTNWINKTAAGDAGMYFRQDTTSRGPNEKQLKQVYQVKTQVA 937
Query: 552 QETSHLVTRE 581
QETS ++ +E
Sbjct: 938 QETSDILAQE 947
>ref|XP_002328516.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 156 bits (395), Expect = 4e-36
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+IVDV+EEEP+ED+NG S PIDVS+PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80
Score = 98.2 bits (243), Expect = 2e-18
Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 375 SSNLPNQFEQNLGPLPSPPTNWIGK-GAGDADMYFRQEAVQRSANEKQVKQVYQIKTRAA 551
++NL NQFE N GPLPSPPTNWI K AGDA MYFRQ+ R NEKQ+KQVYQ+KT+ A
Sbjct: 878 TTNLYNQFEHNTGPLPSPPTNWINKTAAGDAGMYFRQDTTSRGPNEKQLKQVYQVKTQVA 937
Query: 552 QETSHLVTRE 581
QETS ++ +E
Sbjct: 938 QETSDILAQE 947
>gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
Length = 972
Score = 152 bits (384), Expect = 7e-35
Identities = 68/79 (86%), Positives = 72/79 (91%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+IVDVVEE+P+E NGV PIDVSRPNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEQPREGPNGVPLPIDVSRPNPNGYEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVF 379
HPCFHP+GKPAP TYD VF
Sbjct: 61 HPCFHPDGKPAPATYDDVF 79
>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp.
vesca]
Length = 971
Score = 150 bits (380), Expect = 2e-34
Identities = 67/80 (83%), Positives = 73/80 (91%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+IVDVVEE P+ED NGV PIDVSRPNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEHPREDPNGVPRPIDVSRPNPNGFEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+G+PAP TY+ V+K
Sbjct: 61 HPCFHPDGRPAPVTYEDVYK 80
>gb|ERP48233.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
Length = 965
Score = 150 bits (379), Expect = 3e-34
Identities = 68/80 (85%), Positives = 74/80 (92%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYR LADRYPL+I DV+EEEP+ED+NG S PIDVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80
Score = 87.8 bits (216), Expect = 2e-15
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +3
Query: 381 NLPNQFEQNLGPLPSPPTNWIGK-GAGDADMYFRQEAVQRSANEKQVKQVYQIKTRAAQE 557
NL NQ EQN G L SPPTNWI K AG+ MYF+Q++ NEKQVKQVYQ+KT+ AQE
Sbjct: 891 NLQNQAEQNTGLLSSPPTNWINKTAAGNTGMYFKQKSTSIGPNEKQVKQVYQVKTQVAQE 950
Query: 558 TSHLVTREASDLNQQ 602
T + +E DL QQ
Sbjct: 951 TPDIQAQETPDLKQQ 965
>ref|XP_002319052.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 150 bits (379), Expect = 3e-34
Identities = 68/80 (85%), Positives = 74/80 (92%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYR LADRYPL+I DV+EEEP+ED+NG S PIDVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80
Score = 87.8 bits (216), Expect = 2e-15
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +3
Query: 381 NLPNQFEQNLGPLPSPPTNWIGK-GAGDADMYFRQEAVQRSANEKQVKQVYQIKTRAAQE 557
NL NQ EQN G L SPPTNWI K AG+ MYF+Q++ NEKQVKQVYQ+KT+ AQE
Sbjct: 891 NLQNQAEQNTGLLSSPPTNWINKTAAGNTGMYFKQKSTSIGPNEKQVKQVYQVKTQVAQE 950
Query: 558 TSHLVTREASDLNQQ 602
T + +E DL QQ
Sbjct: 951 TPDIQAQETPDLKQQ 965
>gb|ESR46297.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
Length = 959
Score = 149 bits (376), Expect = 6e-34
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+IVDVVEE+P+ D GV+ P+DVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+GKPAP +YD VFK
Sbjct: 61 HPCFHPDGKPAPTSYDDVFK 80
Score = 63.5 bits (153), Expect = 4e-08
Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 354 RLQLMMLSSNLPNQFEQNLGPLPSPPTNWIGKG-AGDADMYFRQEAVQRSANEK-QVKQV 527
R+Q S N QF N+GPLP PP NWI + AG+ MY E+ A EK QVK+V
Sbjct: 882 RVQNSGYSGNPSQQFLPNMGPLPPPPNNWINRAVAGEPAMYNGHESASGGAYEKQQVKKV 941
Query: 528 YQIKTRAAQETS 563
YQIKTR ETS
Sbjct: 942 YQIKTRLPYETS 953
>gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlisea aurea]
Length = 955
Score = 149 bits (376), Expect = 6e-34
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL IVDVVEEEP+ + G+ PID+S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVVEEEPRRNEFGMEIPIDISGPNPNGIEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKP+PP YD VFK
Sbjct: 61 HPCFHPEGKPSPPAYDDVFK 80
>gb|ERM93513.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
Length = 936
Score = 148 bits (374), Expect = 1e-33
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL IVDV+EEEP E NGV P+DVS+PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVIEEEPVEGDNGVLLPVDVSKPNPNNTEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TY+ VFK
Sbjct: 61 HPCFHPEGKPAPSTYNEVFK 80
>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 148 bits (374), Expect = 1e-33
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DVVEEEP + NGV PIDVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKP P TYD VFK
Sbjct: 61 HPCFHPEGKPPPATYDAVFK 80
>ref|XP_004494674.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cicer arietinum]
Length = 958
Score = 147 bits (371), Expect = 2e-33
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +IVDVVE+ P A+GV FP+DVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEDSPTAAASGVPFPVDVSKPNPNGIEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+GKPAP TYD VF+
Sbjct: 61 HPCFHPDGKPAPATYDDVFR 80
Score = 56.6 bits (135), Expect = 5e-06
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 375 SSNLPNQFEQNLGPLPSPPTNWIGKGAGDADMYFR-QEAVQRSANEKQVKQVYQIKTRAA 551
++NL QF QN+GP P PP NWI K +Y R QEA A +K +K+VYQ+KTR
Sbjct: 890 TTNLQPQFVQNIGP-PIPPPNWISKAPDTNGIYARHQEAALGGAYDKPIKKVYQVKTRQP 948
Query: 552 QE 557
Q+
Sbjct: 949 QD 950
>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 147 bits (371), Expect = 2e-33
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DVVEEEP +GV FPIDVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKP P TYD VFK
Sbjct: 61 HPCFHPEGKPPPATYDAVFK 80
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 147 bits (371), Expect = 2e-33
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DVVEEEP +GV FPIDVS+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKP P TYD VFK
Sbjct: 61 HPCFHPEGKPPPATYDAVFK 80
>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 147 bits (370), Expect = 3e-33
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYPL+I DVVEE+P +GV FPID S+PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+GKPAP TYD VFK
Sbjct: 61 HPCFHPDGKPAPATYDDVFK 80
>gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]
Length = 990
Score = 146 bits (368), Expect = 5e-33
Identities = 63/80 (78%), Positives = 71/80 (88%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DV+EEEP+ED G P+DVS+PNPNG+EFDNLYLD+NGII
Sbjct: 1 MGVPAFYRWLADRYPQSIADVIEEEPREDGLGNQIPVDVSKPNPNGLEFDNLYLDINGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHP+GKPAP TYD VFK
Sbjct: 61 HPCFHPDGKPAPATYDDVFK 80
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 381 NLPNQFEQNLGPLPSPPTNWIGKGAG-DADMYFRQEAVQRSANEKQVKQVYQIKTRAAQE 557
NL ++ EQN G LP PPT WI K + Y +QE A EKQ+K+VYQIKTR +
Sbjct: 924 NLGHRSEQNSGALPKPPTKWINKPVNVNTGTYLKQENASSVAYEKQMKKVYQIKTRPQEM 983
Query: 558 T 560
T
Sbjct: 984 T 984
>ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease
[Medicago truncatula]
Length = 629
Score = 143 bits (361), Expect = 3e-32
Identities = 66/81 (81%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKED-ANGVSFPIDVSRPNPNGVEFDNLYLDMNGI 319
MGVPAFYRWLADRYP +IVDVVEE P A G FP+DVSRPNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 320 IHPCFHPEGKPAPPTYDVVFK 382
IHPCFHP+GKPAP TYD VFK
Sbjct: 61 IHPCFHPDGKPAPATYDDVFK 81
>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
[Medicago truncatula]
Length = 956
Score = 143 bits (361), Expect = 3e-32
Identities = 66/81 (81%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKED-ANGVSFPIDVSRPNPNGVEFDNLYLDMNGI 319
MGVPAFYRWLADRYP +IVDVVEE P A G FP+DVSRPNPNG+EFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 320 IHPCFHPEGKPAPPTYDVVFK 382
IHPCFHP+GKPAP TYD VFK
Sbjct: 61 IHPCFHPDGKPAPATYDDVFK 81
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 375 SSNLPNQFEQNLGPLPSPPTNWIGKGAGDADMYFR-QEAVQRSANEKQVKQVYQIKTRAA 551
++NL QF QN+GP P PP NWI K MY R QEA A +K +K+VYQIKTR
Sbjct: 888 TTNLQPQFVQNIGP-PIPPPNWISKAPDTNGMYARHQEAAVGGAYDKPIKKVYQIKTRNP 946
Query: 552 QE 557
Q+
Sbjct: 947 QD 948
>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
thaliana] gi|17381112|gb|AAL36368.1| putative
exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease
[Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
[Arabidopsis thaliana]
Length = 947
Score = 142 bits (359), Expect = 5e-32
Identities = 63/80 (78%), Positives = 68/80 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DVVEEEP + G P+D++RPNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80
>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 142 bits (359), Expect = 5e-32
Identities = 63/80 (78%), Positives = 68/80 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLAIVDVVEEEPKEDANGVSFPIDVSRPNPNGVEFDNLYLDMNGII 322
MGVPAFYRWLADRYP +I DVVEEEP + G P+D++RPNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 323 HPCFHPEGKPAPPTYDVVFK 382
HPCFHPEGKPAP TYD VFK
Sbjct: 61 HPCFHPEGKPAPATYDDVFK 80