BLASTX nr result
ID: Jatropha_contig00039692
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00039692
(616 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 272 5e-71
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [... 256 3e-66
gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus pe... 252 6e-65
gb|ESR46766.1| hypothetical protein CICLE_v10001637mg [Citrus cl... 249 3e-64
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [... 248 1e-63
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 247 2e-63
gb|EOY11642.1| Pseudouridine synthase family protein isoform 1 [... 243 4e-62
gb|EOY11643.1| Pseudouridine synthase family protein isoform 2 [... 241 9e-62
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [... 228 1e-57
gb|ESQ29721.1| hypothetical protein EUTSA_v10023586mg [Eutrema s... 223 2e-56
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 218 1e-54
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 218 1e-54
ref|XP_004495663.1| PREDICTED: RNA pseudourine synthase 1-like [... 214 1e-53
gb|ESW16990.1| hypothetical protein PHAVU_007G200900g [Phaseolus... 213 2e-53
ref|XP_002894642.1| pseudouridine synthase family protein [Arabi... 213 2e-53
ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Caps... 211 1e-52
ref|XP_003555184.1| PREDICTED: RNA pseudourine synthase 1-like [... 211 2e-52
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana] 210 2e-52
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian... 210 2e-52
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu... 206 3e-51
>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 321
Score = 272 bits (696), Expect = 5e-71
Identities = 132/174 (75%), Positives = 150/174 (86%)
Frame = +2
Query: 95 PTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAV 274
PTSQN PL ++NYPTPLSPP PSISK+IELARA+SASSRS+LF LS+++V+YEDQWL+AV
Sbjct: 10 PTSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAV 69
Query: 275 NKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHK 454
NKPQGVYCE +LESVP + S+ T+ +EGA G E HLANRLDRDTSGV VITKSHK
Sbjct: 70 NKPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHK 129
Query: 455 VASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
VASKLVKAFT HK+KKTYIA C G AP WEKIT+KSGHGRSKFG WR+YAASDV
Sbjct: 130 VASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDV 183
>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
vesca]
Length = 347
Score = 256 bits (655), Expect = 3e-66
Identities = 129/201 (64%), Positives = 156/201 (77%)
Frame = +2
Query: 14 IFIRHKTIFARSFGYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARA 193
+F KT+ + ++ + +T+S ++P+SQNA +NYP PLSPP P ISK +ELARA
Sbjct: 14 VFFNPKTLTSFPKPFNFLRSVTMS-DQPSSQNALQISQNYPVPLSPPLPLISKNMELARA 72
Query: 194 MSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGAS 373
MSASS+S+LF LS+N+V+YEDQWL+ VNKPQG+YCE +LESVP + +S G
Sbjct: 73 MSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAES--------GLE 124
Query: 374 GTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKIT 553
G PE HLANRLDRDTSGV +ITKSHKVA+KLVKAFT HKV KTYIA C GSAP WE+IT
Sbjct: 125 GKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERIT 184
Query: 554 VKSGHGRSKFGAWRIYAASDV 616
VKSGHGRSKFGAWR+YAASDV
Sbjct: 185 VKSGHGRSKFGAWRVYAASDV 205
>gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
Length = 316
Score = 252 bits (643), Expect = 6e-65
Identities = 124/174 (71%), Positives = 144/174 (82%)
Frame = +2
Query: 95 PTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAV 274
P+SQNA +NYP PLSPP P ISK IELARAMSASS+S+LF+LS+++V++EDQWL+ V
Sbjct: 10 PSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVV 69
Query: 275 NKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHK 454
NKPQGVYCE++LESVP +CDS+ S G E HLANRLDRDTSG+ VITKSHK
Sbjct: 70 NKPQGVYCESVLESVPQLLCDSAES-----GTPANQLELHLANRLDRDTSGLMVITKSHK 124
Query: 455 VASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
VASKLVKAFT HK+ KTYIA C GSAP WE+IT+KSGHGRSKFGAWR+YAASDV
Sbjct: 125 VASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDV 178
>gb|ESR46766.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
gi|557535649|gb|ESR46767.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
Length = 357
Score = 249 bits (637), Expect = 3e-64
Identities = 133/208 (63%), Positives = 156/208 (75%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 APKPIFIRHKTIFARSFGYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIE 181
APK + KT F+ +SM + T PT +NAP +NYPTPLSPP P+ISK+IE
Sbjct: 17 APKGVPRFRKTFFS----LASMLNPT----EPTCENAPQIQQNYPTPLSPPLPAISKDIE 68
Query: 182 LARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPL---GICDSSTST 352
L RAMSASS+S+L+ LS+++V+YED+W VAVNKPQGVYCE++L SVP G S S
Sbjct: 69 LTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSAESKSG 128
Query: 353 NLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSA 532
L+EG L E HLANRLDRDTSGV VITKSHKVASKLVKAFT HKV KTYIA C G A
Sbjct: 129 RLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPA 188
Query: 533 PTWEKITVKSGHGRSKFGAWRIYAASDV 616
P W++IT+ SGHGRSKFGAWR+YAASDV
Sbjct: 189 PKWKRITIISGHGRSKFGAWRVYAASDV 216
>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
Length = 366
Score = 248 bits (632), Expect = 1e-63
Identities = 123/196 (62%), Positives = 150/196 (76%), Gaps = 3/196 (1%)
Frame = +2
Query: 38 FARSF---GYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASS 208
F +SF + S+S+ + P + N P ENYP PLSPP P+ISK +ELARAM ASS
Sbjct: 23 FTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASS 82
Query: 209 RSNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPE 388
+S+L+ALS N+VIYED+WL+AVNKPQG+YCE +L +VP + DS+ + G +LPE
Sbjct: 83 KSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA-----GIKTSLPE 137
Query: 389 PHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGH 568
HLANRLDRDTSGV VITKSHKVASKLVKAFT H V K+YIAFC G++P W+KI VKSGH
Sbjct: 138 LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGH 197
Query: 569 GRSKFGAWRIYAASDV 616
GRSKFG WR+YAA+DV
Sbjct: 198 GRSKFGVWRVYAAADV 213
>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
[Cucumis sativus]
Length = 366
Score = 247 bits (630), Expect = 2e-63
Identities = 123/196 (62%), Positives = 149/196 (76%), Gaps = 3/196 (1%)
Frame = +2
Query: 38 FARSF---GYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASS 208
F +SF + S+S+ + P + N P ENYP PLSPP P+ISK +ELARAM ASS
Sbjct: 23 FTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASS 82
Query: 209 RSNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPE 388
+S+L+ALS N+VIYED+WL+AVNKPQG+YCE +L +VP + DS+ + G +LPE
Sbjct: 83 KSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA-----GIKTSLPE 137
Query: 389 PHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGH 568
HLANRLDRDTSGV VITKSHKVASKLVKAFT H V K+YIAFC G++P W KI VKSGH
Sbjct: 138 LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGH 197
Query: 569 GRSKFGAWRIYAASDV 616
GRSKFG WR+YAA+DV
Sbjct: 198 GRSKFGVWRVYAAADV 213
>gb|EOY11642.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
Length = 345
Score = 243 bits (619), Expect = 4e-62
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +2
Query: 95 PTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAV 274
P P + +NYPTPLSPP PSISK+IELARAM+ASS+S+LF LS+++++YED+WL+AV
Sbjct: 31 PKMSTNPNSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAV 90
Query: 275 NKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHK 454
NKPQG+YC+++L S+P + DS+ S L++G + E HLANRLDRDTSG+ VITKSHK
Sbjct: 91 NKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHK 150
Query: 455 VASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
VA+ LVKAFT H V KTY+AFC GSAP E+IT+KSGHGRSKFGAWR+YAA DV
Sbjct: 151 VAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDV 204
>gb|EOY11643.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 313
Score = 241 bits (616), Expect = 9e-62
Identities = 113/168 (67%), Positives = 142/168 (84%)
Frame = +2
Query: 113 PLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGV 292
P + +NYPTPLSPP PSISK+IELARAM+ASS+S+LF LS+++++YED+WL+AVNKPQG+
Sbjct: 5 PNSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGI 64
Query: 293 YCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLV 472
YC+++L S+P + DS+ S L++G + E HLANRLDRDTSG+ VITKSHKVA+ LV
Sbjct: 65 YCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAALV 124
Query: 473 KAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
KAFT H V KTY+AFC GSAP E+IT+KSGHGRSKFGAWR+YAA DV
Sbjct: 125 KAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDV 172
>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
Length = 348
Score = 228 bits (580), Expect = 1e-57
Identities = 116/195 (59%), Positives = 142/195 (72%)
Frame = +2
Query: 32 TIFARSFGYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSR 211
T RS G S P S++AP + NYP P+SPP P+ISK IE +RAMSASSR
Sbjct: 21 TAAVRSLGASLPHTTMAEYIDPNSKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSR 80
Query: 212 SNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEP 391
S+LF+L ++++++EDQWL+AVNKPQGVYCE +L SV + DS +
Sbjct: 81 SSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDSD--------GHDSCRSL 132
Query: 392 HLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHG 571
HLANRLDRDTSGV VITKSH+VA+KL+KAF+ KV KTY+A C G+APTWEKIT+KSGHG
Sbjct: 133 HLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHG 192
Query: 572 RSKFGAWRIYAASDV 616
RSKFGAWR+YAASDV
Sbjct: 193 RSKFGAWRVYAASDV 207
>gb|ESQ29721.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
Length = 333
Score = 223 bits (569), Expect = 2e-56
Identities = 117/198 (59%), Positives = 147/198 (74%), Gaps = 9/198 (4%)
Frame = +2
Query: 50 FGYSSMSDLT-----VSVNRPTSQN-APLNVE---NYPTPLSPPFPSISKEIELARAMSA 202
F +SS + LT VS+ ++N P V+ NYP P+S P P ISK+IEL RAM A
Sbjct: 13 FSFSSNTKLTKPYFAVSIKAMEARNDLPTTVDTNQNYPKPISAPPPPISKDIELKRAMEA 72
Query: 203 SSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTL 382
SS+S+LF L++N+V+YED+WL+AVNKP+G+YCE++L S P I DSS++ N
Sbjct: 73 SSKSSLFNLTRNDVLYEDEWLMAVNKPKGIYCESVLSSAPKVIVDSSSTAN--------- 123
Query: 383 PEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKS 562
E HLANRLDRDTSGV +ITKSHKVA+KLVKAFT HK++K+YIA C GS+P W KITV+S
Sbjct: 124 -EFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRS 182
Query: 563 GHGRSKFGAWRIYAASDV 616
GHGRSK GAWR+YAA DV
Sbjct: 183 GHGRSKHGAWRVYAALDV 200
>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
Length = 332
Score = 218 bits (554), Expect = 1e-54
Identities = 102/162 (62%), Positives = 130/162 (80%)
Frame = +2
Query: 128 NYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEAL 307
+YP PLSPP P++SK+IE RA++ASS+S LF+LS+++VI+ED+W++AVNKPQG+YCE++
Sbjct: 46 DYPVPLSPPLPALSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCESV 105
Query: 308 LESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTG 487
L S+P +L + E HLANRLDRDTSGV +ITK HKVA+K VKAFT
Sbjct: 106 LSSLP----------DLLNDTGANVSELHLANRLDRDTSGVMLITKLHKVAAKFVKAFTD 155
Query: 488 HKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASD 613
HKV+KTY+A+C G AP WEKITVKSGHGRSK+GAWR+YAASD
Sbjct: 156 HKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASD 197
>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
Length = 308
Score = 218 bits (554), Expect = 1e-54
Identities = 102/162 (62%), Positives = 130/162 (80%)
Frame = +2
Query: 128 NYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEAL 307
+YP PLSPP P++SK+IE RA++ASS+S LF+LS+++VI+ED+W++AVNKPQG+YCE++
Sbjct: 16 DYPVPLSPPLPTLSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCESV 75
Query: 308 LESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTG 487
L S+P +L + E HLANRLDRDTSGV +ITK HKVA+K VKAFT
Sbjct: 76 LSSLP----------DLLNDTGANVSELHLANRLDRDTSGVMLITKLHKVAAKFVKAFTD 125
Query: 488 HKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASD 613
HKV+KTY+A+C G AP WEKITVKSGHGRSK+GAWR+YAASD
Sbjct: 126 HKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASD 167
>ref|XP_004495663.1| PREDICTED: RNA pseudourine synthase 1-like [Cicer arietinum]
Length = 313
Score = 214 bits (545), Expect = 1e-53
Identities = 109/171 (63%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Frame = +2
Query: 104 QNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKP 283
+ P ENYP PLSP P+ISKEIEL RA AS+ S LF+LSK ++IYED+WL+ VNKP
Sbjct: 14 ETTPTVAENYPVPLSPQLPAISKEIELNRAKIASTNSQLFSLSKIHIIYEDEWLLVVNKP 73
Query: 284 QGVYCEALLESVPLGICDSSTSTNLTEGASGTLP-EPHLANRLDRDTSGVTVITKSHKVA 460
G+YC+++L S+ + TLP E HLANRLDRDTSG+ VITKSHKVA
Sbjct: 74 NGIYCDSVLTSLQ---------------SQQTLPSELHLANRLDRDTSGIMVITKSHKVA 118
Query: 461 SKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASD 613
SKLVKAFT HKV+KTYIA CTGS P WE ITV+SGHGRSKFGAWR+YA SD
Sbjct: 119 SKLVKAFTDHKVQKTYIARCTGSIPNWETITVRSGHGRSKFGAWRVYAFSD 169
>gb|ESW16990.1| hypothetical protein PHAVU_007G200900g [Phaseolus vulgaris]
Length = 315
Score = 213 bits (543), Expect = 2e-53
Identities = 106/191 (55%), Positives = 142/191 (74%)
Frame = +2
Query: 44 RSFGYSSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLF 223
+ F +S+++ ++ S + + P+ ENYP PLSPP P+ISK++EL+RAM+ASS S++F
Sbjct: 7 KPFVFSAVA-MSGSTSHHPERKTPVAAENYPVPLSPPLPAISKQMELSRAMTASSNSSIF 65
Query: 224 ALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLAN 403
+LS ++++Y D L+AVNK G+YCE LL S+ +S S L HLAN
Sbjct: 66 SLSPSDILYHDDHLIAVNKHHGIYCETLLSSL------ASQSHEL-----------HLAN 108
Query: 404 RLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKF 583
RLDRDTSG+ ++TK+HKVA+KLVKAFT H+VKKTYIA CTGS P WE++TV+SGHGRSKF
Sbjct: 109 RLDRDTSGILLLTKAHKVAAKLVKAFTEHRVKKTYIALCTGSPPNWERVTVRSGHGRSKF 168
Query: 584 GAWRIYAASDV 616
GAWR+YAASDV
Sbjct: 169 GAWRVYAASDV 179
>ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297340484|gb|EFH70901.1| pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 321
Score = 213 bits (543), Expect = 2e-53
Identities = 113/194 (58%), Positives = 141/194 (72%), Gaps = 4/194 (2%)
Frame = +2
Query: 47 SFGYSSMSDLTVSV----NRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRS 214
SF S+ S LT + + LN+ +YP P+SPP P ISK+IEL RAM ASS+S
Sbjct: 9 SFSISTNSILTKPYFAISTKAMEATSELNL-HYPKPISPPPPPISKDIELRRAMEASSKS 67
Query: 215 NLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPH 394
+LF L++++V+YED++L+AVNKP+GVYCEA+L S P + DSS+ E H
Sbjct: 68 SLFNLTRDHVLYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-------------EFH 114
Query: 395 LANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGR 574
LANRLDRDTSGV +ITKSHKVA+KLVKAFT HK++K+YIA C GS+P W KITV SGHGR
Sbjct: 115 LANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRKITVSSGHGR 174
Query: 575 SKFGAWRIYAASDV 616
SK GAWR+YAA DV
Sbjct: 175 SKHGAWRVYAALDV 188
>ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Capsella rubella]
gi|565489799|ref|XP_006302539.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
gi|482571248|gb|EOA35436.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
gi|482571249|gb|EOA35437.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
Length = 329
Score = 211 bits (537), Expect = 1e-52
Identities = 110/195 (56%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
Frame = +2
Query: 47 SFGYSSMSDLT-----VSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSR 211
SF +S+ S +T S+ + + LN+ NYP P+S P P ISK+IEL RAM ASS+
Sbjct: 9 SFSFSANSIITKPYFAFSIKSMEATTSELNL-NYPKPISSPPPPISKDIELKRAMEASSK 67
Query: 212 SNLFALSKNNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEP 391
S+L+ L++++V+YED+ L+AVNKP+GVYCEA+L S P + DSS+ E
Sbjct: 68 SSLYNLTRDDVLYEDEHLMAVNKPKGVYCEAVLRSAPQIVLDSSS-------------EF 114
Query: 392 HLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHG 571
HLANRLDRDTSGV +ITKSHKVA+KLVKAFT HK++K+YIA C GS+P W K+TV SGHG
Sbjct: 115 HLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKVTVSSGHG 174
Query: 572 RSKFGAWRIYAASDV 616
RSK GAWR+Y+A DV
Sbjct: 175 RSKHGAWRVYSALDV 189
>ref|XP_003555184.1| PREDICTED: RNA pseudourine synthase 1-like [Glycine max]
Length = 320
Score = 211 bits (536), Expect = 2e-52
Identities = 109/187 (58%), Positives = 136/187 (72%), Gaps = 4/187 (2%)
Frame = +2
Query: 68 SDLTVSVNRPTSQNA----PLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSK 235
S + V+++ SQ A P+ ENYP PLSPP P ISK++EL+RAMSA+S S+LF+LS
Sbjct: 10 SAVAVAMSGSHSQQAQPKSPIPTENYPVPLSPPLPPISKQLELSRAMSAASNSSLFSLSP 69
Query: 236 NNVIYEDQWLVAVNKPQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDR 415
+++Y D L+AVNK G+YCE LL S+ +S S L HLANRLDR
Sbjct: 70 ADILYHDDHLIAVNKHPGIYCETLLSSL------ASQSHQL-----------HLANRLDR 112
Query: 416 DTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWR 595
DT+GV ++TKSHKVA+KLVKAFT HKVKKTYIA CTG P WE++T++SGHGRSKFGAWR
Sbjct: 113 DTTGVLLLTKSHKVAAKLVKAFTDHKVKKTYIALCTGPPPNWERVTLRSGHGRSKFGAWR 172
Query: 596 IYAASDV 616
+YAASDV
Sbjct: 173 VYAASDV 179
>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 210 bits (535), Expect = 2e-52
Identities = 102/163 (62%), Positives = 128/163 (78%)
Frame = +2
Query: 128 NYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEAL 307
NYP P+S P P ISK+IEL RAM ASS+S+LF L++++++YED++L+AVNKP+GVYCEA+
Sbjct: 10 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 69
Query: 308 LESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTG 487
L S P + DSS+ E HLANRLDRDTSGV +ITKSHKVA+KLVKAFT
Sbjct: 70 LRSAPQIVLDSSS-------------EYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTE 116
Query: 488 HKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
HK++K+YIA C GS+P W ++TV SGHGRSK GAWR+YAA DV
Sbjct: 117 HKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDV 159
>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
[Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
[Arabidopsis thaliana]
Length = 322
Score = 210 bits (535), Expect = 2e-52
Identities = 102/163 (62%), Positives = 128/163 (78%)
Frame = +2
Query: 128 NYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNKPQGVYCEAL 307
NYP P+S P P ISK+IEL RAM ASS+S+LF L++++++YED++L+AVNKP+GVYCEA+
Sbjct: 39 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 308 LESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTG 487
L S P + DSS+ E HLANRLDRDTSGV +ITKSHKVA+KLVKAFT
Sbjct: 99 LRSAPQIVLDSSS-------------EYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTE 145
Query: 488 HKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASDV 616
HK++K+YIA C GS+P W ++TV SGHGRSK GAWR+YAA DV
Sbjct: 146 HKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDV 188
>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
gi|355480262|gb|AES61465.1| Lon protease-like protein
[Medicago truncatula]
Length = 1262
Score = 206 bits (525), Expect = 3e-51
Identities = 103/171 (60%), Positives = 126/171 (73%)
Frame = +2
Query: 101 SQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNVIYEDQWLVAVNK 280
S+N P + NYP PLSP P+ISK+IEL RA A+S S LF+L++ ++IYED++L+AVNK
Sbjct: 8 SENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEYLLAVNK 67
Query: 281 PQGVYCEALLESVPLGICDSSTSTNLTEGASGTLPEPHLANRLDRDTSGVTVITKSHKVA 460
PQG+YC+ +L S+ + S E HLANRLDRDTSGV +ITKSHK+A
Sbjct: 68 PQGIYCDNVLTSL--------------QSQSTVGSELHLANRLDRDTSGVMLITKSHKIA 113
Query: 461 SKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYAASD 613
SKLVKAFT +VKKTYIAFCTG P W+ ITVKSGHGRSKFGAWR+Y SD
Sbjct: 114 SKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSD 164
Score = 89.4 bits (220), Expect = 7e-16
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +2
Query: 383 PEPHLANRLDRDTSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKS 562
P L + + R T V +I KSHKVASKLVKAFT HKV+KTYI+ CTG P WE ITV+S
Sbjct: 923 PLVFLQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRS 981
Query: 563 GHGRSKFGAWRIYAASDV 616
+GRSKFG R+Y +V
Sbjct: 982 CYGRSKFGTRRVYVFLEV 999