BLASTX nr result

ID: Jatropha_contig00039576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00039576
         (364 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321365.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002321365.1| predicted protein [Populus trichocarpa] gi|222868361|gb|EEF05492.1|
           mitochondrial transcription termination factor-related
           family protein [Populus trichocarpa]
          Length = 517

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
 Frame = +3

Query: 36  FFYSSTSFLSHTSTKPQLSVTSLA----TIGDHQRSAFAGLARTPRYNLRPFLTPVGLRL 203
           F  S++SFL   +    + + SLA    T   H +   A  A+  R     FL PVG  L
Sbjct: 9   FSSSNSSFLLQATNPLPIKLQSLAAPFTTFSPHGKFTLANFAKASR-----FLAPVGFPL 63

Query: 204 TEQVLVHCSYLNSPN-LQYESRFLYSFLKEIGLNDKETELLFAAKPISK 347
           T+ +LV CS L  P+ LQ E   +YSF  E+G N+KET LL    P  K
Sbjct: 64  TKHLLVQCSCLELPSILQSEFGLIYSFFAEMGFNEKETGLLLEQNPALK 112


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