BLASTX nr result
ID: Jatropha_contig00039468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00039468
(523 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523146.1| nucleic acid binding protein, putative [Rici... 118 7e-25
ref|XP_006306427.1| hypothetical protein CARUB_v10012366mg [Caps... 86 6e-15
gb|ESQ33790.1| hypothetical protein EUTSA_v10006950mg [Eutrema s... 84 2e-14
gb|ESQ33789.1| hypothetical protein EUTSA_v10006950mg [Eutrema s... 84 2e-14
gb|AAO00844.1| Unknown protein [Arabidopsis thaliana] 77 2e-12
ref|NP_849735.1| toprim domain-containing protein [Arabidopsis t... 77 2e-12
ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804... 77 2e-12
ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer ... 74 1e-11
ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779... 74 2e-11
gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana] 72 5e-11
gb|EOY25656.1| Toprim domain-containing protein isoform 4 [Theob... 69 5e-10
gb|EOY25655.1| Toprim domain-containing protein isoform 3 [Theob... 69 5e-10
gb|EOY25654.1| Toprim domain-containing protein isoform 2 [Theob... 69 5e-10
gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theob... 69 5e-10
gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus... 65 7e-09
ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|2... 62 7e-08
ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloropl... 59 8e-07
ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257... 56 4e-06
>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223537553|gb|EEF39177.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 700
Score = 118 bits (296), Expect = 7e-25
Identities = 72/159 (45%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = +3
Query: 57 MLRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPATXXXXXXXXXXXXT--RNPYHTF 230
M R+A+ +PQ HL KL S + MGSK F KP T + R YHT
Sbjct: 1 MFRYAYYSPQIHLYKLSSSSSKVGF--MGSKLFLKPTTTTLPPLSPFSYSSSGRLQYHTC 58
Query: 231 KRLLPVACSKPISKIPPY--KANGFTSQATVPTPVYGEEEDXXXXXXXXXXXXXXXXGIE 404
+RLLPV CSKPISK PY K NGF AT+P PV ED GI+
Sbjct: 59 RRLLPVFCSKPISKNRPYLPKTNGF---ATLPAPV--SSEDSEKPHLEKLRGKLEVLGIQ 113
Query: 405 MDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
M+N VPGQ++ LLCP C GG S E++L+LFI+PDG+ A+
Sbjct: 114 MENLVPGQYSSLLCPMCNGGQSGERSLSLFISPDGANAT 152
>ref|XP_006306427.1| hypothetical protein CARUB_v10012366mg [Capsella rubella]
gi|482575138|gb|EOA39325.1| hypothetical protein
CARUB_v10012366mg [Capsella rubella]
Length = 715
Score = 85.5 bits (210), Expect = 6e-15
Identities = 62/164 (37%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Frame = +3
Query: 60 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPATXXXXXXXXXXXXT--RNPYHTFK 233
+RF PQTHLRKL S++LL MGSK F + + R +
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSLL-MGSKQFLEFCLLPSFAVCSSSSSSPGRQLSSVSR 56
Query: 234 RLLPVACSKPISKIPPY--KANGFTSQATVP---TPVYGEEEDXXXXXXXXXXXXXXXX- 395
R PV S+P+SK P+ K NG +S ++P TPV EEE+
Sbjct: 57 RFRPVLASRPVSKNSPFHQKTNGLSSYTSIPRVQTPVDPEEEEADKRAVSSKLVTLRRKL 116
Query: 396 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGA 518
GI+ N PGQH+ L CP+C GGDS EK+L+L+++PDGS A
Sbjct: 117 FEQGIDAQNCHPGQHSGLTCPQCEGGDSGEKSLSLYVSPDGSSA 160
>gb|ESQ33790.1| hypothetical protein EUTSA_v10006950mg [Eutrema salsugineum]
Length = 708
Score = 84.0 bits (206), Expect = 2e-14
Identities = 64/164 (39%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Frame = +3
Query: 60 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFF--FKPATXXXXXXXXXXXXTRNPYHTFK 233
+RF PQTHLRKL S+++L MGSK F F A R K
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSVL-MGSKQFLEFCLAPSFAASPSYTPGRKRQLSSVSK 56
Query: 234 RLLPVACSKPISKIPPY--KANG---FTSQATVPTPVYGEEEDXXXXXXXXXXXXXXXX- 395
RL+PV+ S+P+SK PY + NG +TS + +PTPV EEE
Sbjct: 57 RLVPVSASRPVSKNSPYQNRTNGLSSYTSVSRIPTPVDPEEEADKRAVQFRLANLRRRLA 116
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI+ N GQ++ L+CP C GGDS EK+L+L+I PD S A+
Sbjct: 117 ENGIDAQNCPSGQYSGLICPECEGGDSGEKSLSLYIAPDCSSAT 160
>gb|ESQ33789.1| hypothetical protein EUTSA_v10006950mg [Eutrema salsugineum]
Length = 673
Score = 84.0 bits (206), Expect = 2e-14
Identities = 64/164 (39%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Frame = +3
Query: 60 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFF--FKPATXXXXXXXXXXXXTRNPYHTFK 233
+RF PQTHLRKL S+++L MGSK F F A R K
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSVL-MGSKQFLEFCLAPSFAASPSYTPGRKRQLSSVSK 56
Query: 234 RLLPVACSKPISKIPPY--KANG---FTSQATVPTPVYGEEEDXXXXXXXXXXXXXXXX- 395
RL+PV+ S+P+SK PY + NG +TS + +PTPV EEE
Sbjct: 57 RLVPVSASRPVSKNSPYQNRTNGLSSYTSVSRIPTPVDPEEEADKRAVQFRLANLRRRLA 116
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI+ N GQ++ L+CP C GGDS EK+L+L+I PD S A+
Sbjct: 117 ENGIDAQNCPSGQYSGLICPECEGGDSGEKSLSLYIAPDCSSAT 160
>gb|AAO00844.1| Unknown protein [Arabidopsis thaliana]
Length = 709
Score = 77.4 bits (189), Expect = 2e-12
Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Frame = +3
Query: 60 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPA---TXXXXXXXXXXXXTRNPYHTF 230
+RF PQ H RKL S+++L MGSK F + + +R
Sbjct: 1 MRFLLRLPQIHFRKL---SCSMSVL-MGSKQFLEFCLLPSFASYPSSPSYSSSRQVSSVS 56
Query: 231 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEEEDXXXXXXXXXXXXXXXX 395
+R PV S+P+SK PY + NG +S + VPTPV E E
Sbjct: 57 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 116
Query: 396 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 117 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 161
>ref|NP_849735.1| toprim domain-containing protein [Arabidopsis thaliana]
gi|487522982|sp|B5X582.1|TWIH_ARATH RecName:
Full=Twinkle homolog protein,
chloroplastic/mitochondrial; AltName: Full=DNA helicase;
AltName: Full=DNA primase; Flags: Precursor
gi|209529811|gb|ACI49800.1| At1g30680 [Arabidopsis
thaliana] gi|332193138|gb|AEE31259.1| toprim
domain-containing protein [Arabidopsis thaliana]
Length = 709
Score = 77.4 bits (189), Expect = 2e-12
Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Frame = +3
Query: 60 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPA---TXXXXXXXXXXXXTRNPYHTF 230
+RF PQ H RKL S+++L MGSK F + + +R
Sbjct: 1 MRFLLRLPQIHFRKL---SCSMSVL-MGSKQFLEFCLLPSFASYPSSPSYSSSRQVSSVS 56
Query: 231 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEEEDXXXXXXXXXXXXXXXX 395
+R PV S+P+SK PY + NG +S + VPTPV E E
Sbjct: 57 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 116
Query: 396 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 117 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 161
>ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804637 [Glycine max]
Length = 679
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +3
Query: 210 RNPYHTFKRLLPVACSKPISKIPPY--KANGF--TSQATVPTPVYGEE--EDXXXXXXXX 371
R+ + + V CSKPIS+ PP + NG+ SQA++P PV E E
Sbjct: 23 RHRFPCHRPFFTVFCSKPISRNPPLPLRTNGYHGASQASIPRPVQLESPVEKNMELQLNI 82
Query: 372 XXXXXXXXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
G+E + PGQ+NHLLCP C GGD E++L+L+I PDG A+
Sbjct: 83 LKKKLEAIGVETEMCEPGQYNHLLCPECLGGDQEERSLSLYIAPDGGSAA 132
>ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer arietinum]
Length = 697
Score = 74.3 bits (181), Expect = 1e-11
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = +3
Query: 231 KRLLPVACSKPI-SKIPPY--KANGF--TSQATVPTPVYGEEEDXXXXXXXXXXXXXXXX 395
+ + V CSK SK PP K NG+ SQA VP PVY EE+
Sbjct: 54 RTIFTVFCSKKRNSKYPPLPLKTNGYHGASQAKVPKPVY-LEENKLEMQFGVLKKKLEVV 112
Query: 396 GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGA 518
GI+ + VPGQ+NHLLCP C GGD+ EK+L++++ PDG A
Sbjct: 113 GIDTEICVPGQYNHLLCPECQGGDAGEKSLSIYVAPDGGSA 153
>ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779625 [Glycine max]
Length = 678
Score = 73.9 bits (180), Expect = 2e-11
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +3
Query: 210 RNPYHTFKRLLPVACSKPISKIPP--YKANGF--TSQATVPTPVYGEE--EDXXXXXXXX 371
R + + + V CSKPIS+ PP + NG+ +S A++P PV E E
Sbjct: 23 RRRFPSHRPFFTVFCSKPISRNPPSPLRTNGYHGSSHASIPRPVQLESPMEKSVEFQLNI 82
Query: 372 XXXXXXXXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
G+E PGQ+NHLLCP C GGD E++L+L+I PDG A+
Sbjct: 83 LKKKLEAIGMETGMCEPGQYNHLLCPECLGGDQEERSLSLYIAPDGGSAA 132
>gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana]
Length = 670
Score = 72.4 bits (176), Expect = 5e-11
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = +3
Query: 231 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEEEDXXXXXXXXXXXXXXXX 395
+R PV S+P+SK PY + NG +S + VPTPV E E
Sbjct: 35 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 94
Query: 396 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 95 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 139
>gb|EOY25656.1| Toprim domain-containing protein isoform 4 [Theobroma cacao]
Length = 578
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = +3
Query: 231 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYGEE-EDXXXXXXXXXXXXXXXX 395
KRL+P SKP SK + NGF+S A V PVY +E ED
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25655.1| Toprim domain-containing protein isoform 3 [Theobroma cacao]
Length = 712
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = +3
Query: 231 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYGEE-EDXXXXXXXXXXXXXXXX 395
KRL+P SKP SK + NGF+S A V PVY +E ED
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25654.1| Toprim domain-containing protein isoform 2 [Theobroma cacao]
Length = 682
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = +3
Query: 231 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYGEE-EDXXXXXXXXXXXXXXXX 395
KRL+P SKP SK + NGF+S A V PVY +E ED
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
Length = 705
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = +3
Query: 231 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYGEE-EDXXXXXXXXXXXXXXXX 395
KRL+P SKP SK + NGF+S A V PVY +E ED
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 396 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus vulgaris]
Length = 697
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +3
Query: 210 RNPYHTFKRLLPVACSKPISKIPP--YKANGF--TSQATVPTPVYGEEEDXXXXXXXXXX 377
R+ + + V CSKP S+ P + NG+ S A++P PV E
Sbjct: 43 RHRFLPHRPFFTVFCSKPTSRNSPSPLRTNGYHGASHASIPRPVQLESPGAKSVELQFNI 102
Query: 378 XXXXXXGIEMDN--FVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 521
+ M+ VPGQ+NHLLCP C GG+ E++L+L+I PDG A+
Sbjct: 103 LKKRLEAVGMETGICVPGQYNHLLCPECQGGERAERSLSLYIAPDGGSAA 152
>ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|222846276|gb|EEE83823.1|
toprim domain-containing family protein [Populus
trichocarpa]
Length = 658
Score = 62.0 bits (149), Expect = 7e-08
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +3
Query: 315 VPTPVYGEEEDXXXXXXXXXXXXXXXXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALF 494
+P VYG + + GIE+D+F PGQ+N L CP C GG S+EK+ +LF
Sbjct: 9 LPQKVYGLDPEVKKSKLEILRFKLAEVGIELDHFAPGQYNALTCPMCKGGGSKEKSFSLF 68
Query: 495 INPDGSGAS 521
I+ DG AS
Sbjct: 69 ISADGGNAS 77
>ref|XP_006360317.1| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 695
Score = 58.5 bits (140), Expect = 8e-07
Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +3
Query: 138 MGSKFFF-KPATXXXXXXXXXXXXTRNPYHTFKRLLPVACSKPISKIPPYKANGFTSQAT 314
MGSK+F KP+ + T + + SKPIS + + Q
Sbjct: 19 MGSKYFLHKPSITLPTIYKSIPVL----FQTQRLIFSAFASKPISPNRGTSSFSYRPQR- 73
Query: 315 VPTPVYG------EEEDXXXXXXXXXXXXXXXXGIEMDNFVPGQHNHLLCPRCYGGDSRE 476
+P PV G +EE GI++ + PGQ+N LLCP C GG S E
Sbjct: 74 IPPPVSGVMLEDPKEEIAESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGGGSNE 133
Query: 477 KTLALFINPDGSGAS 521
K+L+LFI PDG A+
Sbjct: 134 KSLSLFITPDGHAAT 148
>ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257655 [Vitis vinifera]
gi|297740887|emb|CBI31069.3| unnamed protein product
[Vitis vinifera]
Length = 705
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 258 KPISKIPPYKANGF----TSQATVPTPVYGEEEDXXXXXXXXXXXXXXXX---GIEMDNF 416
KP S+I P F TS + VP PVY E + G +
Sbjct: 66 KPNSRILPISLKTFALPYTSHSNVPGPVYSENPEDTSNSSARLNVLKKKLEVIGFDTQML 125
Query: 417 VPGQHNHLLCPRCYGGDSREKTLALFINPDGSGA 518
GQ++HL CP C GGDS EK+L+LFI DG A
Sbjct: 126 KTGQYSHLTCPTCKGGDSMEKSLSLFITLDGDHA 159