BLASTX nr result
ID: Jatropha_contig00039378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00039378
(542 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523146.1| nucleic acid binding protein, putative [Rici... 115 8e-24
gb|ESQ33790.1| hypothetical protein EUTSA_v10006950mg [Eutrema s... 80 4e-13
gb|ESQ33789.1| hypothetical protein EUTSA_v10006950mg [Eutrema s... 80 4e-13
ref|XP_006306427.1| hypothetical protein CARUB_v10012366mg [Caps... 80 4e-13
gb|AAO00844.1| Unknown protein [Arabidopsis thaliana] 76 5e-12
ref|NP_849735.1| toprim domain-containing protein [Arabidopsis t... 76 5e-12
ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804... 74 2e-11
ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779... 72 6e-11
ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer ... 71 2e-10
gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana] 71 2e-10
gb|EOY25656.1| Toprim domain-containing protein isoform 4 [Theob... 68 1e-09
gb|EOY25655.1| Toprim domain-containing protein isoform 3 [Theob... 68 1e-09
gb|EOY25654.1| Toprim domain-containing protein isoform 2 [Theob... 68 1e-09
gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theob... 68 1e-09
gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus... 65 9e-09
ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|2... 60 4e-07
>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223537553|gb|EEF39177.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 700
Score = 115 bits (287), Expect = 8e-24
Identities = 71/159 (44%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Frame = +1
Query: 76 MLRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPATXXXXXXXXXXXXT--RNPYHTF 249
M R+A+ +PQ HL KL S + MGSK F KP T + R YHT
Sbjct: 1 MFRYAYYSPQIHLYKLSSSSSKVGF--MGSKLFLKPTTTTLPPLSPFSYSSSGRLQYHTC 58
Query: 250 KRLLPVACSKPISKIPPY--KANGFTSQATVPTPVYGEXXXXXXXXXXXXXXXXXXXGIE 423
+RLLPV CSKPISK PY K NGF AT+P PV E GI+
Sbjct: 59 RRLLPVFCSKPISKNRPYLPKTNGF---ATLPAPVSSEDSEKPHLEKLRGKLEVL--GIQ 113
Query: 424 MDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
M+N VPGQ++ LLCP C GG S E++L+LFI+PDG+ A+
Sbjct: 114 MENLVPGQYSSLLCPMCNGGQSGERSLSLFISPDGANAT 152
>gb|ESQ33790.1| hypothetical protein EUTSA_v10006950mg [Eutrema salsugineum]
Length = 708
Score = 79.7 bits (195), Expect = 4e-13
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Frame = +1
Query: 79 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFF--FKPATXXXXXXXXXXXXTRNPYHTFK 252
+RF PQTHLRKL S+++L MGSK F F A R K
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSVL-MGSKQFLEFCLAPSFAASPSYTPGRKRQLSSVSK 56
Query: 253 RLLPVACSKPISKIPPY--KANG---FTSQATVPTPVYGEXXXXXXXXXXXXXXXXXXX- 414
RL+PV+ S+P+SK PY + NG +TS + +PTPV E
Sbjct: 57 RLVPVSASRPVSKNSPYQNRTNGLSSYTSVSRIPTPVDPEEEADKRAVQFRLANLRRRLA 116
Query: 415 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI+ N GQ++ L+CP C GGDS EK+L+L+I PD S A+
Sbjct: 117 ENGIDAQNCPSGQYSGLICPECEGGDSGEKSLSLYIAPDCSSAT 160
>gb|ESQ33789.1| hypothetical protein EUTSA_v10006950mg [Eutrema salsugineum]
Length = 673
Score = 79.7 bits (195), Expect = 4e-13
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Frame = +1
Query: 79 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFF--FKPATXXXXXXXXXXXXTRNPYHTFK 252
+RF PQTHLRKL S+++L MGSK F F A R K
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSVL-MGSKQFLEFCLAPSFAASPSYTPGRKRQLSSVSK 56
Query: 253 RLLPVACSKPISKIPPY--KANG---FTSQATVPTPVYGEXXXXXXXXXXXXXXXXXXX- 414
RL+PV+ S+P+SK PY + NG +TS + +PTPV E
Sbjct: 57 RLVPVSASRPVSKNSPYQNRTNGLSSYTSVSRIPTPVDPEEEADKRAVQFRLANLRRRLA 116
Query: 415 --GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI+ N GQ++ L+CP C GGDS EK+L+L+I PD S A+
Sbjct: 117 ENGIDAQNCPSGQYSGLICPECEGGDSGEKSLSLYIAPDCSSAT 160
>ref|XP_006306427.1| hypothetical protein CARUB_v10012366mg [Capsella rubella]
gi|482575138|gb|EOA39325.1| hypothetical protein
CARUB_v10012366mg [Capsella rubella]
Length = 715
Score = 79.7 bits (195), Expect = 4e-13
Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Frame = +1
Query: 79 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPATXXXXXXXXXXXXT--RNPYHTFK 252
+RF PQTHLRKL S++LL MGSK F + + R +
Sbjct: 1 MRFLLRLPQTHLRKL---SCSMSLL-MGSKQFLEFCLLPSFAVCSSSSSSPGRQLSSVSR 56
Query: 253 RLLPVACSKPISKIPPY--KANGFTSQATVP---TPVYGEXXXXXXXXXXXXXXXXXXX- 414
R PV S+P+SK P+ K NG +S ++P TPV E
Sbjct: 57 RFRPVLASRPVSKNSPFHQKTNGLSSYTSIPRVQTPVDPEEEEADKRAVSSKLVTLRRKL 116
Query: 415 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGA 537
GI+ N PGQH+ L CP+C GGDS EK+L+L+++PDGS A
Sbjct: 117 FEQGIDAQNCHPGQHSGLTCPQCEGGDSGEKSLSLYVSPDGSSA 160
>gb|AAO00844.1| Unknown protein [Arabidopsis thaliana]
Length = 709
Score = 75.9 bits (185), Expect = 5e-12
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Frame = +1
Query: 79 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPA---TXXXXXXXXXXXXTRNPYHTF 249
+RF PQ H RKL S+++L MGSK F + + +R
Sbjct: 1 MRFLLRLPQIHFRKL---SCSMSVL-MGSKQFLEFCLLPSFASYPSSPSYSSSRQVSSVS 56
Query: 250 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEXXXXXXXXXXXXXXXXXXX 414
+R PV S+P+SK PY + NG +S + VPTPV E
Sbjct: 57 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 116
Query: 415 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 117 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 161
>ref|NP_849735.1| toprim domain-containing protein [Arabidopsis thaliana]
gi|487522982|sp|B5X582.1|TWIH_ARATH RecName:
Full=Twinkle homolog protein,
chloroplastic/mitochondrial; AltName: Full=DNA helicase;
AltName: Full=DNA primase; Flags: Precursor
gi|209529811|gb|ACI49800.1| At1g30680 [Arabidopsis
thaliana] gi|332193138|gb|AEE31259.1| toprim
domain-containing protein [Arabidopsis thaliana]
Length = 709
Score = 75.9 bits (185), Expect = 5e-12
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Frame = +1
Query: 79 LRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPA---TXXXXXXXXXXXXTRNPYHTF 249
+RF PQ H RKL S+++L MGSK F + + +R
Sbjct: 1 MRFLLRLPQIHFRKL---SCSMSVL-MGSKQFLEFCLLPSFASYPSSPSYSSSRQVSSVS 56
Query: 250 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEXXXXXXXXXXXXXXXXXXX 414
+R PV S+P+SK PY + NG +S + VPTPV E
Sbjct: 57 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 116
Query: 415 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 117 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 161
>ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804637 [Glycine max]
Length = 679
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +1
Query: 229 RNPYHTFKRLLPVACSKPISKIPPY--KANGF--TSQATVPTPVYGEXXXXXXXXXXXXX 396
R+ + + V CSKPIS+ PP + NG+ SQA++P PV E
Sbjct: 23 RHRFPCHRPFFTVFCSKPISRNPPLPLRTNGYHGASQASIPRPVQLESPVEKNMELQLNI 82
Query: 397 XXXXXX--GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
G+E + PGQ+NHLLCP C GGD E++L+L+I PDG A+
Sbjct: 83 LKKKLEAIGVETEMCEPGQYNHLLCPECLGGDQEERSLSLYIAPDGGSAA 132
>ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779625 [Glycine max]
Length = 678
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +1
Query: 229 RNPYHTFKRLLPVACSKPISKIPP--YKANGF--TSQATVPTPVYGEXXXXXXXXXXXXX 396
R + + + V CSKPIS+ PP + NG+ +S A++P PV E
Sbjct: 23 RRRFPSHRPFFTVFCSKPISRNPPSPLRTNGYHGSSHASIPRPVQLESPMEKSVEFQLNI 82
Query: 397 XXXXXXGIEMDNFV--PGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
I M+ + PGQ+NHLLCP C GGD E++L+L+I PDG A+
Sbjct: 83 LKKKLEAIGMETGMCEPGQYNHLLCPECLGGDQEERSLSLYIAPDGGSAA 132
>ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer arietinum]
Length = 697
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +1
Query: 250 KRLLPVACSKPI-SKIPPY--KANGF--TSQATVPTPVYGEXXXXXXXXXXXXXXXXXXX 414
+ + V CSK SK PP K NG+ SQA VP PVY E
Sbjct: 54 RTIFTVFCSKKRNSKYPPLPLKTNGYHGASQAKVPKPVYLEENKLEMQFGVLKKKLEVV- 112
Query: 415 GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGA 537
GI+ + VPGQ+NHLLCP C GGD+ EK+L++++ PDG A
Sbjct: 113 GIDTEICVPGQYNHLLCPECQGGDAGEKSLSIYVAPDGGSA 153
>gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana]
Length = 670
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Frame = +1
Query: 250 KRLLPVACSKPISKIPPY--KANGFTSQAT---VPTPVYGEXXXXXXXXXXXXXXXXXXX 414
+R PV S+P+SK PY + NG +S + VPTPV E
Sbjct: 35 RRFRPVLASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDTEVEADKRVVLSRLVTLRRKL 94
Query: 415 ---GIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
G++ +N PGQH+ L+CP C GG+S EK+L+LFI PDGS A+
Sbjct: 95 AEQGVDAENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSAT 139
>gb|EOY25656.1| Toprim domain-containing protein isoform 4 [Theobroma cacao]
Length = 578
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/104 (42%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +1
Query: 250 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYG---EXXXXXXXXXXXXXXXXX 408
KRL+P SKP SK + NGF+S A V PVY E
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 409 XXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25655.1| Toprim domain-containing protein isoform 3 [Theobroma cacao]
Length = 712
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/104 (42%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +1
Query: 250 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYG---EXXXXXXXXXXXXXXXXX 408
KRL+P SKP SK + NGF+S A V PVY E
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 409 XXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25654.1| Toprim domain-containing protein isoform 2 [Theobroma cacao]
Length = 682
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/104 (42%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +1
Query: 250 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYG---EXXXXXXXXXXXXXXXXX 408
KRL+P SKP SK + NGF+S A V PVY E
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 409 XXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
Length = 705
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/104 (42%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +1
Query: 250 KRLLPVACSKPISKIPPY--KANGFTS--QATVPTPVYG---EXXXXXXXXXXXXXXXXX 408
KRL+P SKP SK + NGF+S A V PVY E
Sbjct: 56 KRLVPYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLK 115
Query: 409 XXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
GI++ VPG+ N LLCP C GG+S E +L+LFIN DGS AS
Sbjct: 116 QLGIDISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSAS 159
>gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus vulgaris]
Length = 697
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +1
Query: 229 RNPYHTFKRLLPVACSKPISKIPP--YKANGF--TSQATVPTPVYGEXXXXXXXXXXXXX 396
R+ + + V CSKP S+ P + NG+ S A++P PV E
Sbjct: 43 RHRFLPHRPFFTVFCSKPTSRNSPSPLRTNGYHGASHASIPRPVQLESPGAKSVELQFNI 102
Query: 397 XXXXXXGIEMDN--FVPGQHNHLLCPRCYGGDSREKTLALFINPDGSGAS 540
+ M+ VPGQ+NHLLCP C GG+ E++L+L+I PDG A+
Sbjct: 103 LKKRLEAVGMETGICVPGQYNHLLCPECQGGERAERSLSLYIAPDGGSAA 152
>ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|222846276|gb|EEE83823.1|
toprim domain-containing family protein [Populus
trichocarpa]
Length = 658
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +1
Query: 334 VPTPVYGEXXXXXXXXXXXXXXXXXXXGIEMDNFVPGQHNHLLCPRCYGGDSREKTLALF 513
+P VYG GIE+D+F PGQ+N L CP C GG S+EK+ +LF
Sbjct: 9 LPQKVYGLDPEVKKSKLEILRFKLAEVGIELDHFAPGQYNALTCPMCKGGGSKEKSFSLF 68
Query: 514 INPDGSGAS 540
I+ DG AS
Sbjct: 69 ISADGGNAS 77