BLASTX nr result
ID: Jatropha_contig00039348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00039348
(705 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEF02805.2| hypothetical protein POPTR_0018s00640g [Populus t... 188 2e-45
gb|EEE92136.2| hypothetical protein POPTR_0006s25780g [Populus t... 181 1e-43
ref|XP_002324240.1| predicted protein [Populus trichocarpa] 147 4e-33
ref|XP_002308613.1| predicted protein [Populus trichocarpa] 143 6e-32
gb|ESW27209.1| hypothetical protein PHAVU_003G183400g [Phaseolus... 140 3e-31
ref|XP_004141225.1| PREDICTED: translation initiation factor IF-... 140 4e-31
ref|XP_003628540.1| Translation initiation factor [Medicago trun... 140 4e-31
ref|XP_004517199.1| PREDICTED: translation initiation factor IF-... 139 6e-31
ref|YP_007507146.1| translation initiation factor 1 (chloroplast... 139 8e-31
ref|YP_817517.1| translational initiation factor 1 [Coffea arabi... 139 8e-31
ref|YP_001294219.1| translational initiation factor 1 [Buxus mic... 138 1e-30
ref|YP_004465222.1| translational initiation factor 1 [Jacobaea ... 138 2e-30
ref|YP_008081300.1| translational initiation factor 1 (chloropla... 137 3e-30
gb|ADD29843.1| translational initiation factor 1 protein [Berber... 137 3e-30
sp|Q7ICQ5.1|IF1C_FOUSP RecName: Full=Translation initiation fact... 137 4e-30
sp|Q95GN3.1|IF1C_CERJA RecName: Full=Translation initiation fact... 137 4e-30
gb|AGW04777.1| translation initiation factor 1 [Orthosia scoparia] 136 5e-30
gb|ADD29847.1| translational initiation factor 1 protein [Heuche... 136 5e-30
sp|Q95GM4.1|IF1C_GAREL RecName: Full=Translation initiation fact... 136 5e-30
gb|AGW05008.1| translation initiation factor 1 [Vincetoxicum ros... 136 7e-30
>gb|EEF02805.2| hypothetical protein POPTR_0018s00640g [Populus trichocarpa]
Length = 143
Score = 188 bits (477), Expect = 2e-45
Identities = 104/140 (74%), Positives = 110/140 (78%), Gaps = 1/140 (0%)
Frame = +2
Query: 119 HVLTATGFSSFSPTKPPTTLYPRTVFLSQGLIKTTPLNFLKIGTVPA-PRFSVLIQASKV 295
H LTATGFS+ PT L P TVF SQ L KTT +F I T P RF V A K
Sbjct: 11 HALTATGFST-----KPTNLSPSTVFFSQSLTKTTH-SFGLIATTPTISRFPVSTNA-KA 63
Query: 296 NPPGEQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSR 475
NP GEQKWTHEGSVTESLPNGMFRVRLDN+DLIIGYISGKIRKNFVRILPGDRVKVEVSR
Sbjct: 64 NPTGEQKWTHEGSVTESLPNGMFRVRLDNKDLIIGYISGKIRKNFVRILPGDRVKVEVSR 123
Query: 476 YDSSRGRIIYRLRNRDSSSD 535
YDSSRGRI+YRLRNRD +S+
Sbjct: 124 YDSSRGRIVYRLRNRDPTSE 143
>gb|EEE92136.2| hypothetical protein POPTR_0006s25780g [Populus trichocarpa]
Length = 147
Score = 181 bits (460), Expect = 1e-43
Identities = 101/141 (71%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
Frame = +2
Query: 119 HVLTATGFSSFSPTKPPTTLYPRTVFLSQGLIKTTPLNFLKIGTVP--APRFSVLIQASK 292
HVLTATGFS+ PT L P TVF Q L +TT L T + RF V A K
Sbjct: 13 HVLTATGFST-----KPTNLSPTTVFFGQSLTRTTHSFGLVATTTSTTSSRFPVSTSA-K 66
Query: 293 VNPPGEQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVS 472
NP GEQKWTHEGSVTESLPNGMFRV LDN+DLIIGYISGKIRKNFVRILPGDRVKVEVS
Sbjct: 67 ANPTGEQKWTHEGSVTESLPNGMFRVLLDNKDLIIGYISGKIRKNFVRILPGDRVKVEVS 126
Query: 473 RYDSSRGRIIYRLRNRDSSSD 535
RYDSSRGRI+YRLRNRD SS+
Sbjct: 127 RYDSSRGRIVYRLRNRDPSSE 147
>ref|XP_002324240.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 147 bits (370), Expect = 4e-33
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
+QKWTHEGSVTESLPNGMFRVRLDN+DLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS
Sbjct: 3 QQKWTHEGSVTESLPNGMFRVRLDNKDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 62
Query: 488 RGRIIYRLRNRDSSSD 535
RGRI+YRLRNRD +S+
Sbjct: 63 RGRIVYRLRNRDPTSE 78
>ref|XP_002308613.1| predicted protein [Populus trichocarpa]
Length = 72
Score = 143 bits (360), Expect = 6e-32
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKWTHEGSVTESLPNGMFRV LDN+DLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS
Sbjct: 1 EQKWTHEGSVTESLPNGMFRVLLDNKDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 60
Query: 488 RGRIIYRLRNRD 523
RGRI+YRLRNRD
Sbjct: 61 RGRIVYRLRNRD 72
>gb|ESW27209.1| hypothetical protein PHAVU_003G183400g [Phaseolus vulgaris]
Length = 139
Score = 140 bits (354), Expect = 3e-31
Identities = 81/139 (58%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = +2
Query: 119 HVLTATGF-SSFSP-TKPPTTLYPRTVFLSQGLIKTTPLNFLKIGTVPAPRFSVLIQASK 292
H L ++ F ++FSP T PP + RT+ + PL P L A K
Sbjct: 17 HALPSSSFRTNFSPLTLPP---FHRTL----SFLPPPPL---------IPAVPTLPTAVK 60
Query: 293 VNPPGEQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVS 472
+ GEQKW HEG + ESLPNGMFRVRLDNEDLI+GYISGKIRKN+VRILPGDRVKVEVS
Sbjct: 61 ADKSGEQKWVHEGLIMESLPNGMFRVRLDNEDLILGYISGKIRKNYVRILPGDRVKVEVS 120
Query: 473 RYDSSRGRIIYRLRNRDSS 529
RYDSS+GRI+YRLR+ SS
Sbjct: 121 RYDSSKGRIVYRLRSSTSS 139
>ref|XP_004141225.1| PREDICTED: translation initiation factor IF-1, chloroplastic-like
[Cucumis sativus]
Length = 142
Score = 140 bits (353), Expect = 4e-31
Identities = 81/132 (61%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Frame = +2
Query: 143 SSFSPTKPPTTLYPRTV-FLSQGLIKTTPLNFLKIGTVPAPRFSVLIQASKVNPPGEQKW 319
S F P P T L+P LS I FL + +P F VL+ S N EQK
Sbjct: 14 SHFRP--PSTLLFPAVKSHLSLASISFPTSQFLHTPSHASPAF-VLMAKSPKNDTSEQKL 70
Query: 320 THEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSSRGRI 499
+HEGSV ESLPNGMFRVRLDN+DLI+GYISGKIRKNFVRILPGDRV+VEVSRYDS++GRI
Sbjct: 71 SHEGSVVESLPNGMFRVRLDNQDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRI 130
Query: 500 IYRLRN-RDSSS 532
+YR+R+ +DSSS
Sbjct: 131 VYRMRSTKDSSS 142
>ref|XP_003628540.1| Translation initiation factor [Medicago truncatula]
gi|355522562|gb|AET03016.1| Translation initiation
factor [Medicago truncatula]
Length = 147
Score = 140 bits (353), Expect = 4e-31
Identities = 76/134 (56%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
Frame = +2
Query: 125 LTATGFSSFSPT---KPPTTLYPRTVFLSQGLIKTTPLNFLKIGTVPAPRFSVLIQASKV 295
+T FS +PT + P+ L P +PLN P F+V ++S
Sbjct: 23 ITTHSFSFHTPTLHFRTPSFLRP-----------PSPLNL-----TPPSIFTVAAKSSTP 66
Query: 296 NPPGEQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSR 475
+ EQKW HEG +TESLPNGMFRVRLDNEDLI+GYISG+IRKN+VRILPGDRV+VEVSR
Sbjct: 67 DKASEQKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRKNYVRILPGDRVRVEVSR 126
Query: 476 YDSSRGRIIYRLRN 517
YDSS+GRI+YRLRN
Sbjct: 127 YDSSKGRIVYRLRN 140
>ref|XP_004517199.1| PREDICTED: translation initiation factor IF-1, chloroplastic-like
[Cicer arietinum]
Length = 149
Score = 139 bits (351), Expect = 6e-31
Identities = 76/142 (53%), Positives = 96/142 (67%), Gaps = 10/142 (7%)
Frame = +2
Query: 122 VLTATGFSSFSPT-----KPPTTLYPRTVFLSQGLIKTTP--LNFLK---IGTVPAPRFS 271
+ T++ SS +P P TT +P + P L+FL+ + P+ F+
Sbjct: 1 MFTSSSISSHAPIIHHHRLPSTTTHPLCFNAHNHNLTPHPPTLSFLRPPLLSPSPSSIFT 60
Query: 272 VLIQASKVNPPGEQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGD 451
V + + EQKW HEG +TESLPNGMFRVRLDNEDLI+GYISG+IRKN+VRILPGD
Sbjct: 61 VSAKPPTTDKSSEQKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRKNYVRILPGD 120
Query: 452 RVKVEVSRYDSSRGRIIYRLRN 517
RV+VEVSRYDSS+GRI+YRLRN
Sbjct: 121 RVRVEVSRYDSSKGRIVYRLRN 142
>ref|YP_007507146.1| translation initiation factor 1 (chloroplast) [Salvia miltiorrhiza]
gi|401879776|gb|AFQ30963.1| translation initiation
factor 1 (chloroplast) [Salvia miltiorrhiza]
Length = 77
Score = 139 bits (350), Expect = 8e-31
Identities = 63/73 (86%), Positives = 72/73 (98%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKWTHEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGD+VK+EVSRYDSS
Sbjct: 3 EQKWTHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDKVKIEVSRYDSS 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>ref|YP_817517.1| translational initiation factor 1 [Coffea arabica]
gi|122153654|sp|A0A370.1|IF1C_COFAR RecName:
Full=Translation initiation factor IF-1, chloroplastic
gi|116242198|gb|ABJ89713.1| translational initiation
factor 1 [Coffea arabica]
Length = 77
Score = 139 bits (350), Expect = 8e-31
Identities = 63/73 (86%), Positives = 72/73 (98%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKWTHEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVK+EVSRYDS+
Sbjct: 3 EQKWTHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDST 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>ref|YP_001294219.1| translational initiation factor 1 [Buxus microphylla]
gi|482651234|ref|YP_007890408.1| translational
initiation factor 1 (chloroplast) [Ardisia polysticta]
gi|190359547|sp|A6MM71.1|IF1C_BUXMI RecName:
Full=Translation initiation factor IF-1, chloroplastic
gi|146762319|gb|ABQ45283.1| translational initiation
factor 1 [Buxus microphylla] gi|456368005|gb|AGG36919.1|
translational initiation factor 1 (chloroplast) [Ardisia
polysticta]
Length = 77
Score = 138 bits (348), Expect = 1e-30
Identities = 63/74 (85%), Positives = 72/74 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVK+EVSRYDSS
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSS 62
Query: 488 RGRIIYRLRNRDSS 529
RGRIIYRLRN+DS+
Sbjct: 63 RGRIIYRLRNKDSN 76
>ref|YP_004465222.1| translational initiation factor 1 [Jacobaea vulgaris]
gi|308156116|gb|ADO15444.1| translational initiation
factor 1 [Jacobaea vulgaris]
Length = 77
Score = 138 bits (347), Expect = 2e-30
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVK+EVSRYDSS
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSS 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>ref|YP_008081300.1| translational initiation factor 1 (chloroplast) [Catharanthus
roseus] gi|474452111|gb|AGI51179.1| translational
initiation factor 1 (chloroplast) [Catharanthus roseus]
Length = 77
Score = 137 bits (345), Expect = 3e-30
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVKVEVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKVEVSRYDST 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>gb|ADD29843.1| translational initiation factor 1 protein [Berberidopsis corallina]
Length = 77
Score = 137 bits (345), Expect = 3e-30
Identities = 62/74 (83%), Positives = 72/74 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SG+IR++F+RILPGDRVK+EVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDST 62
Query: 488 RGRIIYRLRNRDSS 529
RGRIIYRLRN+DSS
Sbjct: 63 RGRIIYRLRNKDSS 76
>sp|Q7ICQ5.1|IF1C_FOUSP RecName: Full=Translation initiation factor IF-1, chloroplastic
gi|68052237|sp|Q94PL3.1|IF1C_MONCA RecName:
Full=Translation initiation factor IF-1, chloroplastic
gi|13774383|gb|AAK38858.1|AF347634_1 translation
initiation factor IF1 [Fouquieria splendens]
gi|13774392|gb|AAK38862.1|AF347639_1 translation
initiation factor IF1 [Hydrophyllum fendleri]
gi|13774396|gb|AAK38864.1|AF347641_1 translation
initiation factor IF1 [Montinia caryophyllacea]
gi|290486901|gb|ADD29835.1| translational initiation
factor 1 protein [Ehretia acuminata]
gi|290486903|gb|ADD29836.1| translational initiation
factor 1 protein [Ilex cornuta]
gi|306486012|gb|ADM92654.1| translational initiation
factor 1 protein [Davidia involucrata]
Length = 77
Score = 137 bits (344), Expect = 4e-30
Identities = 62/73 (84%), Positives = 71/73 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVK+EVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDST 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>sp|Q95GN3.1|IF1C_CERJA RecName: Full=Translation initiation factor IF-1, chloroplastic
gi|13774364|gb|AAK38850.1|AF347623_1 translation
initiation factor IF1 [Cercidiphyllum japonicum]
Length = 77
Score = 137 bits (344), Expect = 4e-30
Identities = 62/74 (83%), Positives = 72/74 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GYISG+IR++F+RILPGDRVK+EVSRYDS+
Sbjct: 3 EQKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRRSFIRILPGDRVKIEVSRYDST 62
Query: 488 RGRIIYRLRNRDSS 529
RGRIIYRLRN+DS+
Sbjct: 63 RGRIIYRLRNKDSN 76
>gb|AGW04777.1| translation initiation factor 1 [Orthosia scoparia]
Length = 89
Score = 136 bits (343), Expect = 5e-30
Identities = 62/76 (81%), Positives = 72/76 (94%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVKVEVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKVEVSRYDST 62
Query: 488 RGRIIYRLRNRDSSSD 535
+GRIIYRLRN+DS +
Sbjct: 63 KGRIIYRLRNKDSKDN 78
>gb|ADD29847.1| translational initiation factor 1 protein [Heuchera sanguinea]
gi|403226815|gb|AFR25694.1| translational initiation
factor 1 (chloroplast) [Penthorum chinense]
Length = 77
Score = 136 bits (343), Expect = 5e-30
Identities = 61/74 (82%), Positives = 72/74 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SG+IR++F+RILPGDRVK+EVSRYDS+
Sbjct: 3 EQKWVHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDST 62
Query: 488 RGRIIYRLRNRDSS 529
RGRIIYRLRN+DS+
Sbjct: 63 RGRIIYRLRNKDSN 76
>sp|Q95GM4.1|IF1C_GAREL RecName: Full=Translation initiation factor IF-1, chloroplastic
gi|13774390|gb|AAK38861.1|AF347638_1 translation
initiation factor IF1 [Garrya elliptica]
Length = 77
Score = 136 bits (343), Expect = 5e-30
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVKVEVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFMRILPGDRVKVEVSRYDST 62
Query: 488 RGRIIYRLRNRDS 526
RGRIIYRLRN+DS
Sbjct: 63 RGRIIYRLRNKDS 75
>gb|AGW05008.1| translation initiation factor 1 [Vincetoxicum rossicum]
Length = 89
Score = 136 bits (342), Expect = 7e-30
Identities = 62/73 (84%), Positives = 71/73 (97%)
Frame = +2
Query: 308 EQKWTHEGSVTESLPNGMFRVRLDNEDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSS 487
EQKW HEG +TESLPNGMFRVRLDNEDLI+GY+SGKIR++F+RILPGDRVKVEVSRYDS+
Sbjct: 3 EQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKVEVSRYDST 62
Query: 488 RGRIIYRLRNRDS 526
+GRIIYRLRN+DS
Sbjct: 63 KGRIIYRLRNKDS 75