BLASTX nr result

ID: Jatropha_contig00039269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00039269
         (564 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530082.1| hypothetical protein RCOM_0254640 [Ricinus c...    92   1e-16
gb|EEF04404.2| hypothetical protein POPTR_0016s04060g [Populus t...    83   4e-14

>ref|XP_002530082.1| hypothetical protein RCOM_0254640 [Ricinus communis]
           gi|223530393|gb|EEF32281.1| hypothetical protein
           RCOM_0254640 [Ricinus communis]
          Length = 1364

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 64/148 (43%), Positives = 79/148 (53%), Gaps = 34/148 (22%)
 Frame = +3

Query: 144 MVPVKIENETDFDHS--------------SPYQDEEIXXXXXXXXXXXXXXL-SIKLTRL 278
           M P K+E+E D DHS              + YQ+++I              L SIKL +L
Sbjct: 1   MTPSKLESEPDSDHSILSGSLSVTTDSPATSYQNQDIKNKGATESRKKVTKLRSIKLVKL 60

Query: 279 PSLKVSTRHGR-------------------NQFDANGSPNYTKTTASSDAKKEILQKSVK 401
           PSL+ STR  +                    Q DA+ SPNY KTT SSDAKKE LQKSV+
Sbjct: 61  PSLRFSTRQSKIQSSYLCALSSDAASSVQPPQIDAS-SPNYMKTTTSSDAKKESLQKSVR 119

Query: 402 ILTKRSSFKPQESLTRLSSIKLWRSLSR 485
            L++RSSFKP +SLTR+SS K  RSL R
Sbjct: 120 ALSRRSSFKPSKSLTRVSSTKFRRSLMR 147


>gb|EEF04404.2| hypothetical protein POPTR_0016s04060g [Populus trichocarpa]
          Length = 1241

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
 Frame = +3

Query: 144 MVPVKIENETDFDHSSP----------------YQDEEIXXXXXXXXXXXXXXL-SIKLT 272
           M+P K+  E D D+SS                 YQ+E++              L SIKL 
Sbjct: 1   MMPAKLGTEVDSDYSSSSESSSMSSGSSSSSSCYQNEDVGNEGGRELKRKVKKLRSIKLA 60

Query: 273 RLPSLKVSTRHGR--------------NQFDANGSPNYTKTTASSDAKKEILQKSVKILT 410
           RLPSLK+ TR  +              +   +  SPNY +TT SS+AKKE LQKS + L 
Sbjct: 61  RLPSLKLITRQSKVKSGDVSVLSSDVASSHHSRMSPNYMRTTTSSNAKKENLQKSARTLA 120

Query: 411 KRSSFKPQESLTRLSSIKLWRSLSR 485
           +RSSFKP +SLTRLSS K  R L R
Sbjct: 121 RRSSFKPAKSLTRLSSTKFRRPLMR 145


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