BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038949
         (713 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   153   4e-35
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe...   104   2e-20
ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-20
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...    99   1e-18
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    86   8e-15
gb|ESR64004.1| hypothetical protein CICLE_v10007968mg [Citrus cl...    80   8e-13
gb|ESR64003.1| hypothetical protein CICLE_v10007968mg [Citrus cl...    80   8e-13
gb|ESR63998.1| hypothetical protein CICLE_v10007968mg [Citrus cl...    80   8e-13
gb|ESR63997.1| hypothetical protein CICLE_v10007968mg [Citrus cl...    80   8e-13
gb|ESR63995.1| hypothetical protein CICLE_v10007968mg [Citrus cl...    80   8e-13
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-...    79   1e-12
ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-...    79   2e-12
ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor rpoD-...    75   1e-11
gb|ACU19696.1| unknown [Glycine max]                                   75   1e-11
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    74   6e-11
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun...    66   9e-09
emb|CAD20832.1| sigma factor [Spinacia oleracea]                       57   6e-06

>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  153 bits (387), Expect = 4e-35
 Identities = 99/190 (52%), Positives = 114/190 (60%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG GFRL+LKL FPFHS    +           V+GRE +   SRLSFLSVISEEGD  H
Sbjct: 1   MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSF-VRGREATSYQSRLSFLSVISEEGDIAH 59

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           RD LKT AYS + +QT+ENEHSQ E  K++ GKRS  GLN  I DA+V +KED FV PSS
Sbjct: 60  RDPLKTYAYSYA-VQTVENEHSQGEGFKVNFGKRSHFGLN-IIGDAEVSLKEDIFVSPSS 117

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           +K+RT                 ADSD  KLE DI            FNTCLTRTLE  T 
Sbjct: 118 TKERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLE--TT 175

Query: 684 NVLDFSDLPT 713
           NVL+ SD+ T
Sbjct: 176 NVLEVSDVHT 185


>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  104 bits (260), Expect = 2e-20
 Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MGLGFRL+LK GFP HS  H            +V+GREGS N +RLSFLSVISEEG+   
Sbjct: 1   MGLGFRLNLKCGFPVHSS-HWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASS 59

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D LK   + S+  Q LE+  S++EE K +  +     +  +  D Q+ + E  F+    
Sbjct: 60  KDPLKVYTFPSASPQILEDGVSELEEVKTAFRR-----VPKSFSDNQMPVAEGKFISSKG 114

Query: 504 SKDRT-XXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQT 680
            +  T                  A SDVLKLE++I            F+ CL+RTL  +T
Sbjct: 115 LEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTL--KT 172

Query: 681 ANVLDFSDLPT 713
           ++ LD SD+PT
Sbjct: 173 SSFLDLSDIPT 183


>ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|222854562|gb|EEE92109.1|
           hypothetical protein POPTR_0006s25090g [Populus
           trichocarpa]
          Length = 559

 Score =  104 bits (259), Expect = 3e-20
 Identities = 72/191 (37%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+ K G P  S    N          + +G E S+N +RLSFLSV+SEEGD L+
Sbjct: 1   MGVGFRLTPKWGSPMQSHSATNSTSMFSSF--SARGMEASVNQARLSFLSVVSEEGDILN 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +   K+ A SS+  Q +EN+  Q+E  K++V K S   +N+ + + +V ++E+     + 
Sbjct: 59  KHSFKSFACSSAA-QNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTR 117

Query: 504 SKDR-TXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQT 680
            ++R T                 AD D LKLERDI            FN CL+RTL  QT
Sbjct: 118 LRERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTL--QT 175

Query: 681 ANVLDFSDLPT 713
           +NVLD S +PT
Sbjct: 176 SNVLDLSAVPT 186


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 74/190 (38%), Positives = 100/190 (52%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MGLGFRL+LK GFP H+  H            +V+GREGS + + LSFLSVISEE +   
Sbjct: 1   MGLGFRLNLKCGFPIHNS-HWQTNSPSKLPSSSVRGREGSFSSAGLSFLSVISEECETSS 59

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D LK     S+  Q L++  S++EE K++  + S SG  + IDD     KE  F+  SS
Sbjct: 60  KDPLKVYTCPSASPQLLDDGLSEMEE-KMNPRRMSKSGSANMIDD-----KEYSFM--SS 111

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           +  RT                 ADS V KLE++I            F  CL+RTL  +T+
Sbjct: 112 AGLRTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICLSRTL--KTS 169

Query: 684 NVLDFSDLPT 713
           + LD SD+PT
Sbjct: 170 SFLDLSDIPT 179


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK  FP       N          +V+G+E S + +R SF SV SE+ ++L+
Sbjct: 1   MGMGFRLNLKWDFPISCPTLTNSPSRLCTS--SVQGKEASFDSTRFSFPSVTSEDCESLY 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D  K  A SS  +QT EN++S +E  K+ +GK S   L   ++ +Q  I ED     + 
Sbjct: 59  KDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAG 118

Query: 504 -SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQT 680
               +                  ADS++++LERDI            F  CL+RTL+  T
Sbjct: 119 LQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTST 178

Query: 681 ANVLDFSDLPT 713
           +   D    PT
Sbjct: 179 S--FDLFSAPT 187


>gb|ESR64004.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 66/190 (34%), Positives = 91/190 (47%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK   P  S F             +V+GREGS N +RLSFLS ISE+  +  
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSST--SVRGREGSFNSARLSFLSTISEDSASYF 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D +K    S    QT+EN++S+ EE    + ++S S +     DA       DF     
Sbjct: 59  QDPVKAYTCSFVNTQTVENDYSETEE----IRQKSTSCIG---QDAS---SRSDFRLLME 108

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           + D                   ADSD L+LER+I            FN+ L+R   V+T+
Sbjct: 109 NLD-------------VLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRI--VKTS 153

Query: 684 NVLDFSDLPT 713
           NVLD SD+ T
Sbjct: 154 NVLDLSDVHT 163


>gb|ESR64003.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 66/190 (34%), Positives = 91/190 (47%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK   P  S F             +V+GREGS N +RLSFLS ISE+  +  
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSST--SVRGREGSFNSARLSFLSTISEDSASYF 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D +K    S    QT+EN++S+ EE    + ++S S +     DA       DF     
Sbjct: 59  QDPVKAYTCSFVNTQTVENDYSETEE----IRQKSTSCIG---QDAS---SRSDFRLLME 108

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           + D                   ADSD L+LER+I            FN+ L+R   V+T+
Sbjct: 109 NLD-------------VLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRI--VKTS 153

Query: 684 NVLDFSDLPT 713
           NVLD SD+ T
Sbjct: 154 NVLDLSDVHT 163


>gb|ESR63998.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553985|gb|ESR63999.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 383

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 66/190 (34%), Positives = 91/190 (47%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK   P  S F             +V+GREGS N +RLSFLS ISE+  +  
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSST--SVRGREGSFNSARLSFLSTISEDSASYF 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D +K    S    QT+EN++S+ EE    + ++S S +     DA       DF     
Sbjct: 59  QDPVKAYTCSFVNTQTVENDYSETEE----IRQKSTSCIG---QDAS---SRSDFRLLME 108

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           + D                   ADSD L+LER+I            FN+ L+R   V+T+
Sbjct: 109 NLD-------------VLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRI--VKTS 153

Query: 684 NVLDFSDLPT 713
           NVLD SD+ T
Sbjct: 154 NVLDLSDVHT 163


>gb|ESR63997.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553988|gb|ESR64002.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 381

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 66/190 (34%), Positives = 91/190 (47%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK   P  S F             +V+GREGS N +RLSFLS ISE+  +  
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSST--SVRGREGSFNSARLSFLSTISEDSASYF 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D +K    S    QT+EN++S+ EE    + ++S S +     DA       DF     
Sbjct: 59  QDPVKAYTCSFVNTQTVENDYSETEE----IRQKSTSCIG---QDAS---SRSDFRLLME 108

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           + D                   ADSD L+LER+I            FN+ L+R   V+T+
Sbjct: 109 NLD-------------VLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRI--VKTS 153

Query: 684 NVLDFSDLPT 713
           NVLD SD+ T
Sbjct: 154 NVLDLSDVHT 163


>gb|ESR63995.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553982|gb|ESR63996.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553986|gb|ESR64000.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553987|gb|ESR64001.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 286

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 66/190 (34%), Positives = 91/190 (47%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG+GFRL+LK   P  S F             +V+GREGS N +RLSFLS ISE+  +  
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSST--SVRGREGSFNSARLSFLSTISEDSASYF 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D +K    S    QT+EN++S+ EE    + ++S S +     DA       DF     
Sbjct: 59  QDPVKAYTCSFVNTQTVENDYSETEE----IRQKSTSCIG---QDAS---SRSDFRLLME 108

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQTA 683
           + D                   ADSD L+LER+I            FN+ L+R   V+T+
Sbjct: 109 NLD-------------VLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRI--VKTS 153

Query: 684 NVLDFSDLPT 713
           NVLD SD+ T
Sbjct: 154 NVLDLSDVHT 163


>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
           gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
           polymerase sigma factor sigC-like [Cucumis sativus]
          Length = 559

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MG  FR +L+ GF    Q H            A KGRE + N  RLSF S I EEG+++ 
Sbjct: 1   MGTSFRPNLRWGFQI--QTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIP 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           R+ LKT    S   QT  N+   +EE +++ G +SL  ++  I   +    ED+F   +S
Sbjct: 59  RETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTS 118

Query: 504 -SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQT 680
               +                   +S +L LERDI            FNTCL+RTL  +T
Sbjct: 119 LPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTL--KT 176

Query: 681 ANVLDFSDLP 710
           ++  D S LP
Sbjct: 177 SSFHDSSGLP 186


>ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cicer arietinum]
          Length = 545

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 57/179 (31%), Positives = 79/179 (44%)
 Frame = +3

Query: 144 MGLGFRLSLKLGFPFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFLSVISEEGDNLH 323
           MGL FR   +L    HS               +  GRE   N +RLS LS + EEG+ L 
Sbjct: 1   MGLCFRF--RLNTKLHSPHFFTSSTIFLSSSSSAGGREVFFNPTRLSLLSTVYEEGETLQ 58

Query: 324 RDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDDFVPPSS 503
           +D  KT A+SSS ++  E +  Q E  K++ GKRSLS +++ ID+ Q+   E  F     
Sbjct: 59  KDFGKTFAFSSSALEVPEMDLLQGEVTKVNKGKRSLSSVHEIIDNTQLPFGEPHF----- 113

Query: 504 SKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFNTCLTRTLEVQT 680
                                 ADS+ ++LE+DI            FN CLTR+    T
Sbjct: 114 --------GLLMENLGILEETFADSEAMRLEKDIVLKLEKLGALELFNVCLTRSFGTST 164


>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 551

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 50/151 (33%), Positives = 74/151 (49%)
 Frame = +3

Query: 252 REGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSL 431
           RE   N +RLSF S   EEG+ L +D  +  A+SSS ++TLEN+    EE +++ GKRSL
Sbjct: 40  RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99

Query: 432 SGLNDTIDDAQVFIKEDDFVPPSSSKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXX 611
           S ++  ID+ Q+   E   V       R                   DS+ L+LE+ I  
Sbjct: 100 SSVHKMIDNTQMPFGEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIIL 159

Query: 612 XXXXXXXXXXFNTCLTRTLEVQTANVLDFSD 704
                     FN CL+R+L   T+ V +++D
Sbjct: 160 QLGKLGALELFNVCLSRSL--GTSLVSNYAD 188


>gb|ACU19696.1| unknown [Glycine max]
          Length = 207

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 50/151 (33%), Positives = 74/151 (49%)
 Frame = +3

Query: 252 REGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKRSL 431
           RE   N +RLSF S   EEG+ L +D  +  A+SSS ++TLEN+    EE +++ GKRSL
Sbjct: 40  RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99

Query: 432 SGLNDTIDDAQVFIKEDDFVPPSSSKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXX 611
           S ++  ID+ Q+   E   V       R                   DS+ L+LE+ I  
Sbjct: 100 SSVHKMIDNTQMPFGEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIIL 159

Query: 612 XXXXXXXXXXFNTCLTRTLEVQTANVLDFSD 704
                     FN CL+R+L   T+ V +++D
Sbjct: 160 QLGKLGALELFNVCLSRSL--GTSLVSNYAD 188


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
 Frame = +3

Query: 243 VKGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGK 422
           ++G+E S + +R SF SV SE+ ++L++D  K  A SS  +QT EN++S +E  K+ +GK
Sbjct: 82  IQGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGK 141

Query: 423 RSLSGLNDTIDDAQVFIKEDDFVPPSS-SKDRTXXXXXXXXXXXXXXXXXADSDVLKLER 599
            S   L   ++ +Q  I ED     +     +                  ADS++++LER
Sbjct: 142 CSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 600 DIXXXXXXXXXXXXFNTCLTRTLEVQTANVLDFSDLPT 713
           DI            F  CL+RTL+  T+   D    PT
Sbjct: 202 DIMVQLGRLGALKLFQICLSRTLKTSTS--FDLFSAPT 237


>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
           gi|355477497|gb|AES58700.1| RNA polymerase sigma-B
           factor [Medicago truncatula]
          Length = 549

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
 Frame = +3

Query: 144 MGL--GFRLSLKLGF---------PFHSQFHVNXXXXXXXXXXAVKGREGSINISRLSFL 290
           MGL  GFRL+ KL +         PF S  H+           +  GRE   N  RLS L
Sbjct: 1   MGLCFGFRLNTKLRYSTVPLHHSSPFFSNSHI-----FLSSSSSAGGRETLFNPVRLSLL 55

Query: 291 SVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEE-AKISVGKRSLSGLNDTIDDAQV 467
           S + EEG+ L +D  KT A+SS+ ++  E +  Q  E  K++ GKRSLS +++ ID++ +
Sbjct: 56  STVYEEGETLQKDFRKTFAFSSA-LEAPEKDLLQGGELTKVNKGKRSLSSVHEMIDNSHL 114

Query: 468 FIKEDDFVPPSSSKDRTXXXXXXXXXXXXXXXXXADSDVLKLERDIXXXXXXXXXXXXFN 647
             +E  F                           ADS+ L+LE++I            FN
Sbjct: 115 PFEESHF-------------GLLMENLGVLEETFADSEALRLEKNIILQLEKLGALELFN 161

Query: 648 TCLT 659
            CLT
Sbjct: 162 VCLT 165


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
 Frame = +3

Query: 246 KGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKR 425
           +G+E     +RLS L++  +E + L +D L+ +A SSS   T+EN++S +E    ++ KR
Sbjct: 34  RGKELDFGSARLSLLTIGFDESETLRKDTLRPHAGSSSVPLTVENDYSNLE---TTISKR 90

Query: 426 SLSGLNDTIDDAQVFIKEDDFVPPSSSKD-RTXXXXXXXXXXXXXXXXXADSDVLKLERD 602
           S     D I D +V    D  V   S +                     +DS++LKLE+D
Sbjct: 91  S---CKDLISDTEVLSDRDVSVYVRSVQSCSASHFHTLMANINLLENKVSDSELLKLEKD 147

Query: 603 IXXXXXXXXXXXXFNTCLTRTLEVQTANVLDFSDLP 710
           I            F+ CL+R        ++D SDLP
Sbjct: 148 ILVQLGRLGALQLFHACLSR--------IIDMSDLP 175