BLASTX nr result

ID: Jatropha_contig00038826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038826
         (326 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515947.1| mitochondrial processing peptidase alpha sub...    70   4e-10
ref|XP_002299745.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
gb|EMJ16463.1| hypothetical protein PRUPE_ppa004554mg [Prunus pe...    57   2e-06

>ref|XP_002515947.1| mitochondrial processing peptidase alpha subunit, putative [Ricinus
           communis] gi|223544852|gb|EEF46367.1| mitochondrial
           processing peptidase alpha subunit, putative [Ricinus
           communis]
          Length = 492

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/76 (52%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 MYR-AASRLRALKSNVGNLGAVRYXXXXXXXXXXXXGGFFSWLTGGQGGSLPPMXXXXXX 277
           MYR AASRLRALKS+VGNLGA RY             GFFSWLTG +  SLPP+      
Sbjct: 1   MYRTAASRLRALKSHVGNLGATRYATSSAVTARTSSPGFFSWLTGEKSSSLPPLSSPLAD 60

Query: 278 XXXXXXXXXYVEPSKV 325
                    YVEPSKV
Sbjct: 61  VSLPPPLPDYVEPSKV 76


>ref|XP_002299745.1| predicted protein [Populus trichocarpa] gi|222847003|gb|EEE84550.1|
           mitochondrial processing peptidase alpha subunit 2
           family protein [Populus trichocarpa]
          Length = 507

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 MYRAA-SRLRALKSNVGNLGAVRYXXXXXXXXXXXXGGFFSWLTGGQGGSLPPMXXXXXX 277
           M+R+A SRLRALK   GNLG  RY             GFFSWLTG Q  S PP+      
Sbjct: 1   MHRSAISRLRALKGCAGNLGTTRYATSTAVASRPSSPGFFSWLTGEQASSFPPLEVPLAG 60

Query: 278 XXXXXXXXXYVEPSKV 325
                    YV+P KV
Sbjct: 61  VAFPPSLPDYVQPGKV 76


>gb|EMJ16463.1| hypothetical protein PRUPE_ppa004554mg [Prunus persica]
          Length = 503

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = +2

Query: 101 MYRAASRLRALKSNVGNLGAVRYXXXXXXXXXXXXGGFFSWLTGGQGGSLPPMXXXXXXX 280
           MY+AASRLRALK   GN+GA R+            GG FSWLTG    +LPP+       
Sbjct: 1   MYKAASRLRALKGRAGNVGATRF-ATSAAAIKPASGGIFSWLTGESSSTLPPLETQLPGV 59

Query: 281 XXXXXXXXYVEPSK 322
                   +V+PSK
Sbjct: 60  NLPPALPDHVQPSK 73


Top