BLASTX nr result
ID: Jatropha_contig00038700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00038700
(367 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric... 142 6e-32
gb|ERP60572.1| hypothetical protein POPTR_0005s05300g [Populus t... 123 2e-26
gb|EOY11115.1| Pseudouridine synthase family protein isoform 3 [... 122 5e-26
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 122 5e-26
gb|ESR46229.1| hypothetical protein CICLE_v10003382mg [Citrus cl... 122 6e-26
gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 120 1e-25
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C... 116 3e-24
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt... 115 7e-24
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt... 115 7e-24
emb|CBI34194.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 114 1e-23
gb|ESQ49598.1| hypothetical protein EUTSA_v10022286mg, partial [... 112 4e-23
ref|XP_004171457.1| PREDICTED: multisubstrate pseudouridine synt... 112 5e-23
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 112 5e-23
gb|AAG51420.1|AC009465_20 unknown protein; 78996-83414 [Arabidop... 112 5e-23
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe... 111 8e-23
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata... 110 1e-22
ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps... 108 9e-22
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt... 107 1e-21
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt... 107 2e-21
>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
d, putative [Ricinus communis]
Length = 753
Score = 142 bits (357), Expect = 6e-32
Identities = 74/121 (61%), Positives = 89/121 (73%)
Frame = +3
Query: 3 NSTYYARTLTTASRESYSSISPMSTLKTTIEERDVGILCYISQLPGFRGILKQRYSDFIV 182
NSTY T T + S+ TL TTIEE DVGI CYIS++PGFRGILKQRYSDFIV
Sbjct: 29 NSTYRTTTATLVADHSFK------TLMTTIEESDVGISCYISKVPGFRGILKQRYSDFIV 82
Query: 183 NEVDTDGNVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
NEVD +GNVVHLTSL VP +IVE +R +++N++ K+Y +EIESFR LA + DTQ LE
Sbjct: 83 NEVDNNGNVVHLTSLHVPREIVEVAEEREEEITNQVGKNYAAEIESFRELAGDADTQRLE 142
Query: 363 A 365
A
Sbjct: 143 A 143
>gb|ERP60572.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
Length = 752
Score = 123 bits (309), Expect = 2e-26
Identities = 64/96 (66%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
++EE DVGILCYISQLPGFRGILKQRY+DFIVNEVDTDGNVVHLT LE PPQ+VE +
Sbjct: 54 SMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKEC 113
Query: 267 ANKVSNEL---DKDYKSEIESFRLLASEPDTQCLEA 365
KVS+E K Y++EIE FR LA + D + LE+
Sbjct: 114 GAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLES 149
>gb|EOY11115.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
Length = 672
Score = 122 bits (306), Expect = 5e-26
Identities = 65/97 (67%), Positives = 73/97 (75%)
Frame = +3
Query: 75 TLKTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEA 254
TL TTI E DVGILC+IS LPGFRGILKQRYSDFIVNEVDT+GNVVHLTSL+ PP EA
Sbjct: 41 TLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP---EA 97
Query: 255 VGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
V + K ++L+K Y SEI FR LA + D LEA
Sbjct: 98 VQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEA 134
>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 122 bits (306), Expect = 5e-26
Identities = 65/97 (67%), Positives = 73/97 (75%)
Frame = +3
Query: 75 TLKTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEA 254
TL TTI E DVGILC+IS LPGFRGILKQRYSDFIVNEVDT+GNVVHLTSL+ PP EA
Sbjct: 41 TLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP---EA 97
Query: 255 VGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
V + K ++L+K Y SEI FR LA + D LEA
Sbjct: 98 VQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEA 134
>gb|ESR46229.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
Length = 697
Score = 122 bits (305), Expect = 6e-26
Identities = 61/92 (66%), Positives = 71/92 (77%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
T++E D GILC+IS LPGFRGILKQRY DFIVNEVDTD VVHLTSL+VPP+ AV
Sbjct: 3 TVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPE-EAAVEHN 61
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
K S++L++ Y SEIESFR LA + D QCLE
Sbjct: 62 ETKASDQLNRSYASEIESFRSLAGDSDAQCLE 93
>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1
[Theobroma cacao]
Length = 763
Score = 120 bits (302), Expect = 1e-25
Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 10/107 (9%)
Frame = +3
Query: 75 TLKTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIV-- 248
TL TTI E DVGILC+IS LPGFRGILKQRYSDFIVNEVDT+GNVVHLTSL+ PP+++
Sbjct: 41 TLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEVMID 100
Query: 249 --------EAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
+AV + K ++L+K Y SEI FR LA + D LEA
Sbjct: 101 VFSLNKFTQAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEA 147
>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
sativus]
Length = 719
Score = 116 bits (290), Expect = 3e-24
Identities = 63/113 (55%), Positives = 78/113 (69%)
Frame = +3
Query: 24 TLTTASRESYSSISPMSTLKTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDG 203
+LTT + SS + T K+ + E DVGIL YIS LPGFRGILKQRYSDFIVNEVDTDG
Sbjct: 22 SLTTPKLTNRSSSIAVMTTKS-VGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDG 80
Query: 204 NVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
NVVHLTSL+ PP+++ V + + + + Y SEIE FR LA + D + LE
Sbjct: 81 NVVHLTSLDAPPEVI--VSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILE 131
>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 693
Score = 115 bits (287), Expect = 7e-24
Identities = 57/93 (61%), Positives = 69/93 (74%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
T +E +VGI CYIS LPGFRGILKQRYSDF+VNEVD +GNVVHLT+LE PP++V+ +
Sbjct: 2 TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK---EN 58
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
K + KDY +EIE FR LAS D + LEA
Sbjct: 59 GAKTEDAASKDYSAEIEKFRCLASGEDVERLEA 91
>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 701
Score = 115 bits (287), Expect = 7e-24
Identities = 57/93 (61%), Positives = 69/93 (74%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
T +E +VGI CYIS LPGFRGILKQRYSDF+VNEVD +GNVVHLT+LE PP++V+ +
Sbjct: 2 TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK---EN 58
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
K + KDY +EIE FR LAS D + LEA
Sbjct: 59 GAKTEDAASKDYSAEIEKFRCLASGEDVERLEA 91
>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
Length = 693
Score = 114 bits (285), Expect = 1e-23
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +3
Query: 90 IEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDRA 269
+EE DVGI YISQLPGFRGILKQRY DFIVNEVD+DGNVVHLTSL+ PP+ +E
Sbjct: 4 LEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME---KNE 60
Query: 270 NKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
K+S++ +K Y SEIE FR L + D +CL+
Sbjct: 61 TKISDQSNKGYASEIELFRSLVGDSDVECLK 91
>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
vinifera]
Length = 694
Score = 114 bits (285), Expect = 1e-23
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +3
Query: 90 IEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDRA 269
+EE DVGI YISQLPGFRGILKQRY DFIVNEVD+DGNVVHLTSL+ PP+ +E
Sbjct: 4 LEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME---KNE 60
Query: 270 NKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
K+S++ +K Y SEIE FR L + D +CL+
Sbjct: 61 TKISDQSNKGYASEIELFRSLVGDSDVECLK 91
>gb|ESQ49598.1| hypothetical protein EUTSA_v10022286mg, partial [Eutrema
salsugineum]
Length = 692
Score = 112 bits (281), Expect = 4e-23
Identities = 57/94 (60%), Positives = 73/94 (77%)
Frame = +3
Query: 81 KTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVG 260
K T++E DVGI C+ISQLPGFRGILKQRY+DFIVNEVD DGNVVHLTSL+V P++ E
Sbjct: 39 KKTVDESDVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDVSPEMDEKEE 98
Query: 261 DRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
++ K S+++ + Y S IESFR ++S D + LE
Sbjct: 99 EK-TKSSDDVPQSYASAIESFRSISSVTDAERLE 131
>ref|XP_004171457.1| PREDICTED: multisubstrate pseudouridine synthase 7-like, partial
[Cucumis sativus]
Length = 402
Score = 112 bits (280), Expect = 5e-23
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
++ E DVGIL YIS LPGFRGILKQRYSDFIVNEVDTDGNVVHLTSL+ PP+IV G
Sbjct: 5 SVGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEIVSESGP- 63
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
+ + + Y SEIE FR LA + D + LE
Sbjct: 64 --TIVHSTSQSYASEIELFRSLAGDSDAEILE 93
>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
gi|52354299|gb|AAU44470.1| hypothetical protein
AT3G04820 [Arabidopsis thaliana]
gi|61742699|gb|AAX55170.1| hypothetical protein
At3g04820 [Arabidopsis thaliana]
gi|332640619|gb|AEE74140.1| pseudouridine synthase
[Arabidopsis thaliana]
Length = 715
Score = 112 bits (280), Expect = 5e-23
Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 9/113 (7%)
Frame = +3
Query: 51 YSSISPMSTLKT---------TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDG 203
YSS+S + + T T++E DVGI C+ISQLPGFRGILKQRY+DFIVNEVD DG
Sbjct: 18 YSSLSWTTKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDG 77
Query: 204 NVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
NVVHLTSL++PP++ D+A N + ++Y S +ESF+ ++S D + LE
Sbjct: 78 NVVHLTSLDLPPEMAVKEEDKAKSCDN-VPQNYTSAVESFKSISSVTDAERLE 129
>gb|AAG51420.1|AC009465_20 unknown protein; 78996-83414 [Arabidopsis thaliana]
Length = 699
Score = 112 bits (280), Expect = 5e-23
Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 9/113 (7%)
Frame = +3
Query: 51 YSSISPMSTLKT---------TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDG 203
YSS+S + + T T++E DVGI C+ISQLPGFRGILKQRY+DFIVNEVD DG
Sbjct: 18 YSSLSWTTKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDG 77
Query: 204 NVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
NVVHLTSL++PP++ D+A N + ++Y S +ESF+ ++S D + LE
Sbjct: 78 NVVHLTSLDLPPEMAVKEEDKAKSCDN-VPQNYTSAVESFKSISSVTDAERLE 129
>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
Length = 691
Score = 111 bits (278), Expect = 8e-23
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = +3
Query: 78 LKTTIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAV 257
+KTT EE DVGI CYISQLPGFRGILKQRYSDF+VNEVDT+ NVVHLT+L+ P + V+ +
Sbjct: 1 MKTT-EEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEI 59
Query: 258 GDRANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
K + KDY +EIESFR L D + LEA
Sbjct: 60 ---ETKTHDATSKDYTTEIESFRSLVDPDDAERLEA 92
>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
gi|297330312|gb|EFH60731.1| pseudouridylate synthase
[Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 110 bits (276), Expect = 1e-22
Identities = 62/114 (54%), Positives = 81/114 (71%), Gaps = 10/114 (8%)
Frame = +3
Query: 51 YSSISPMSTLKTT---------IEERDVGILCYISQLPGFRGILKQR-YSDFIVNEVDTD 200
YSS+S +T+ TT ++E DVGI C+ISQLPGFRGILKQR Y+DFIVNEVD D
Sbjct: 18 YSSLSWTTTIATTAKTFEGMTTVDEADVGISCFISQLPGFRGILKQRSYADFIVNEVDID 77
Query: 201 GNVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
GNVVHLTSL++PP++ D+ K S+ + ++Y S IESFR ++S D + LE
Sbjct: 78 GNVVHLTSLDLPPEMDVKEEDK-TKTSDNVPQNYTSAIESFRSISSVTDAERLE 130
>ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella]
gi|482568803|gb|EOA32992.1| hypothetical protein
CARUB_v10016322mg [Capsella rubella]
Length = 704
Score = 108 bits (269), Expect = 9e-22
Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 9/113 (7%)
Frame = +3
Query: 51 YSSISPMSTLKTT---------IEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDG 203
YSS +T+ TT ++E DVGI C+ISQLPGFRGILKQRY+DFIVNEVD +G
Sbjct: 20 YSSFHWTTTMATTDKTIEGMKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDING 79
Query: 204 NVVHLTSLEVPPQIVEAVGDRANKVSNELDKDYKSEIESFRLLASEPDTQCLE 362
NVVHLTSL++PP++ D+ K S+ + ++Y S IESF+ +++ D + LE
Sbjct: 80 NVVHLTSLDLPPEMDVKEEDK-TKSSDNVPQNYTSAIESFKSISNATDAERLE 131
>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
lycopersicum]
Length = 685
Score = 107 bits (268), Expect = 1e-21
Identities = 56/93 (60%), Positives = 68/93 (73%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
T++E DVGI CYIS LPGFRGILKQRYSDFIVNEVD D NVVHL SLE P + E ++
Sbjct: 3 TMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSE---NK 59
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
+S++L++ Y +EIESFR LA D L+A
Sbjct: 60 DVNISDQLNRSYVTEIESFRSLAGNSDADKLKA 92
>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
tuberosum]
Length = 685
Score = 107 bits (267), Expect = 2e-21
Identities = 56/93 (60%), Positives = 68/93 (73%)
Frame = +3
Query: 87 TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 266
T++E DVGI CYIS LPGFRGILKQRYSDFIVNEVD D NVVHLT LE P + E ++
Sbjct: 3 TMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSE---NK 59
Query: 267 ANKVSNELDKDYKSEIESFRLLASEPDTQCLEA 365
+S++L++ Y +EIESFR LA D L+A
Sbjct: 60 DVNISDQLNRSYVTEIESFRSLAGNSDADKLKA 92