BLASTX nr result

ID: Jatropha_contig00038618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038618
         (559 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528892.1| hypothetical protein RCOM_0187400 [Ricinus c...    64   2e-08

>ref|XP_002528892.1| hypothetical protein RCOM_0187400 [Ricinus communis]
           gi|223531646|gb|EEF33472.1| hypothetical protein
           RCOM_0187400 [Ricinus communis]
          Length = 523

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 55/153 (35%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
 Frame = +3

Query: 87  YELTTPLRRSQRLLNRKTPNPNTENPK------LKTNCIKSDRKSIISGTPAQGSRRTPR 248
           ++LTTPLRRSQRLL++     +TE+ K       K +  KSD KS I G P    RR+PR
Sbjct: 18  HKLTTPLRRSQRLLDQNPQGLHTESRKPTKSYTRKDSERKSDEKSSIHGIPVLKYRRSPR 77

Query: 249 LSNKVDSVXXXXXXXXXXXXGNTISATIKKTDREESKKKPIGRLFNKSADKVEIVXXXXX 428
           LSN+V+               N+    +KK+D E   KK     FNK +D+VE       
Sbjct: 78  LSNRVEKNSSIRRSTRLSLLQNSY-PLVKKSDNE--PKKIQDSSFNKLSDRVEENSSIRR 134

Query: 429 XXXXXXXENTNSAIIDKSDPEELKKKPVSCLFK 527
                  EN N  +  K    +LKK   S L K
Sbjct: 135 SLRLSLLENRNEVV--KKSNNKLKKVQNSSLNK 165


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