BLASTX nr result
ID: Jatropha_contig00038616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00038616
(504 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 167 1e-39
gb|EEE93652.2| hypothetical protein POPTR_0005s15420g [Populus t... 111 8e-23
ref|XP_002337334.1| predicted protein [Populus trichocarpa] 108 5e-22
ref|XP_002329296.1| predicted protein [Populus trichocarpa] 99 7e-19
gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative ... 98 1e-18
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ... 98 1e-18
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ... 98 1e-18
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ... 98 1e-18
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ... 98 1e-18
gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus pe... 92 9e-17
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp... 82 7e-14
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp... 82 9e-14
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 80 2e-13
gb|ESR43980.1| hypothetical protein CICLE_v10013368mg [Citrus cl... 80 3e-13
ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, part... 77 2e-12
gb|ESQ41603.1| hypothetical protein EUTSA_v10012836mg [Eutrema s... 76 5e-12
ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [... 74 1e-11
emb|CAC01859.1| putative protein [Arabidopsis thaliana] 74 1e-11
ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrat... 73 3e-11
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp... 69 8e-10
>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical
protein [Ricinus communis]
Length = 742
Score = 167 bits (423), Expect = 1e-39
Identities = 82/128 (64%), Positives = 97/128 (75%)
Frame = +1
Query: 73 MPATLFLQFYAYNPITSSFNPQSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXXIKV 252
MP+ LFLQF++YNPI SS NP +NK+ N+QN F+ +KNTE T IKV
Sbjct: 1 MPSALFLQFFSYNPIASSLNPATNKSSLNNAQNPKFATNKNTEFTLLSVPNSQSNAPIKV 60
Query: 253 PTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKIVKS 432
PTAPWMKGPLLL+ HE++NLS PR KNSS NANIEKSDK LT KESGVRG KAM KIVKS
Sbjct: 61 PTAPWMKGPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKS 120
Query: 433 IDKLQQNK 456
I++LQ+N+
Sbjct: 121 IEQLQENQ 128
>gb|EEE93652.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
Length = 729
Score = 111 bits (278), Expect = 8e-23
Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 9/135 (6%)
Frame = +1
Query: 79 ATLFLQFYA-YNPITSSFNPQSNKNYFKNSQN------SSFSIDKNTELTXXXXXXXXXX 237
+ L L+F++ Y PITSS NP + K+ N S F+ + N EL
Sbjct: 4 SALCLKFFSSYTPITSSLNPTTKKHCNTTLNNAQITTPSMFANNNNKELAVLTNPISQSN 63
Query: 238 XX--IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKA 411
+KVPT PW+KGPL+L+ HE+LNL+ P+ K N IEK DKALTAKESGVRGNKA
Sbjct: 64 ATTNVKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKIEKDDKALTAKESGVRGNKA 123
Query: 412 MAKIVKSIDKLQQNK 456
M +IVKS+++LQ+++
Sbjct: 124 MIQIVKSVERLQRDE 138
>ref|XP_002337334.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 108 bits (271), Expect = 5e-22
Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 10/136 (7%)
Frame = +1
Query: 79 ATLFLQFYA-YNPITSSFNPQSNKNYFKNSQNSS-------FSIDKNTELTXXXXXXXXX 234
+ L L+F++ Y PITS+ NP + K+ N+ F+ + N EL
Sbjct: 4 SALCLKFFSSYTPITSALNPTTKKHGNTTLNNAQITTPSFMFANNNNKELAVLTNPISQS 63
Query: 235 XXX--IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNK 408
+KVPT PW+KGPL+L+ HE+LNL+ P+ K N IEK DKALTAKESGVRGNK
Sbjct: 64 NATTNVKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKIEKDDKALTAKESGVRGNK 123
Query: 409 AMAKIVKSIDKLQQNK 456
AM +IVKS+++LQ+++
Sbjct: 124 AMIQIVKSVERLQRDE 139
>ref|XP_002329296.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 98.6 bits (244), Expect = 7e-19
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +1
Query: 244 IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKI 423
+KVPT PW+KGPL+L+ HE+LNL+ P+ K N IEK DKALTAKESGVRGNKAM +I
Sbjct: 26 VKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKIEKDDKALTAKESGVRGNKAMIQI 85
Query: 424 VKSIDKLQQNK 456
VKS+++LQ+++
Sbjct: 86 VKSVERLQRDE 96
>gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative isoform 5
[Theobroma cacao]
Length = 788
Score = 97.8 bits (242), Expect = 1e-18
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 61 SSSLMPATLFLQFYAYNP-ITSSFNP-QSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
SSSLM AT+F+ ++ + SS NP +++K + NS FS+ K+
Sbjct: 36 SSSLMLATVFISPIPFSSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPN----------- 84
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK+PTAPWMKGPLLL+ HE+LN S K SS N+ + DKAL KESGVRG K M
Sbjct: 85 NGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS-NSKAKAPDKALFGKESGVRGKKVM 143
Query: 415 AKIVKSIDKLQQNKI-QLTHKLILMGFEIGD 504
KI+++++ LQ N++ + T I FE+G+
Sbjct: 144 KKIIRNVEMLQGNEVLEDTQIGIREEFEVGN 174
>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4
[Theobroma cacao]
Length = 767
Score = 97.8 bits (242), Expect = 1e-18
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 61 SSSLMPATLFLQFYAYNP-ITSSFNP-QSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
SSSLM AT+F+ ++ + SS NP +++K + NS FS+ K+
Sbjct: 10 SSSLMLATVFISPIPFSSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPN----------- 58
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK+PTAPWMKGPLLL+ HE+LN S K SS N+ + DKAL KESGVRG K M
Sbjct: 59 NGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS-NSKAKAPDKALFGKESGVRGKKVM 117
Query: 415 AKIVKSIDKLQQNKI-QLTHKLILMGFEIGD 504
KI+++++ LQ N++ + T I FE+G+
Sbjct: 118 KKIIRNVEMLQGNEVLEDTQIGIREEFEVGN 148
>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3
[Theobroma cacao]
Length = 788
Score = 97.8 bits (242), Expect = 1e-18
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 61 SSSLMPATLFLQFYAYNP-ITSSFNP-QSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
SSSLM AT+F+ ++ + SS NP +++K + NS FS+ K+
Sbjct: 10 SSSLMLATVFISPIPFSSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPN----------- 58
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK+PTAPWMKGPLLL+ HE+LN S K SS N+ + DKAL KESGVRG K M
Sbjct: 59 NGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS-NSKAKAPDKALFGKESGVRGKKVM 117
Query: 415 AKIVKSIDKLQQNKI-QLTHKLILMGFEIGD 504
KI+++++ LQ N++ + T I FE+G+
Sbjct: 118 KKIIRNVEMLQGNEVLEDTQIGIREEFEVGN 148
>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2
[Theobroma cacao]
Length = 804
Score = 97.8 bits (242), Expect = 1e-18
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 61 SSSLMPATLFLQFYAYNP-ITSSFNP-QSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
SSSLM AT+F+ ++ + SS NP +++K + NS FS+ K+
Sbjct: 36 SSSLMLATVFISPIPFSSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPN----------- 84
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK+PTAPWMKGPLLL+ HE+LN S K SS N+ + DKAL KESGVRG K M
Sbjct: 85 NGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS-NSKAKAPDKALFGKESGVRGKKVM 143
Query: 415 AKIVKSIDKLQQNKI-QLTHKLILMGFEIGD 504
KI+++++ LQ N++ + T I FE+G+
Sbjct: 144 KKIIRNVEMLQGNEVLEDTQIGIREEFEVGN 174
>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1
[Theobroma cacao]
Length = 818
Score = 97.8 bits (242), Expect = 1e-18
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 61 SSSLMPATLFLQFYAYNP-ITSSFNP-QSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
SSSLM AT+F+ ++ + SS NP +++K + NS FS+ K+
Sbjct: 36 SSSLMLATVFISPIPFSSSLNSSQNPSKTHKENRSLNNNSKFSVSKDPN----------- 84
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK+PTAPWMKGPLLL+ HE+LN S K SS N+ + DKAL KESGVRG K M
Sbjct: 85 NGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS-NSKAKAPDKALFGKESGVRGKKVM 143
Query: 415 AKIVKSIDKLQQNKI-QLTHKLILMGFEIGD 504
KI+++++ LQ N++ + T I FE+G+
Sbjct: 144 KKIIRNVEMLQGNEVLEDTQIGIREEFEVGN 174
>gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
Length = 809
Score = 91.7 bits (226), Expect = 9e-17
Identities = 59/155 (38%), Positives = 80/155 (51%), Gaps = 27/155 (17%)
Frame = +1
Query: 73 MPATLFLQ-------------------FYAYNPITSSFN---PQSNK--NYFKNSQNSSF 180
MPATLFL F++YNPI+S+ N PQ+ K N + +S
Sbjct: 1 MPATLFLTPLSTLPNITHHLPSHSNPPFHSYNPISSALNSKPPQNPKPTNPIPSKSPNSL 60
Query: 181 SIDKNTELTXXXXXXXXXXXX---IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NAN 351
S+ T IK PTAPWMKGPLLL+ HE+++ S PR K + NA
Sbjct: 61 SLSSTTTTPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAK 120
Query: 352 IEKSDKALTAKESGVRGNKAMAKIVKSIDKLQQNK 456
EK D L K G+RG+KA+ +IV+SI++L N+
Sbjct: 121 AEKPDTVLAGKLVGIRGDKAIKQIVQSIERLGPNQ 155
>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum tuberosum]
Length = 802
Score = 82.0 bits (201), Expect = 7e-14
Identities = 50/135 (37%), Positives = 71/135 (52%)
Frame = +1
Query: 55 HHSSSLMPATLFLQFYAYNPITSSFNPQSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
HHS+S + L ++N +SF+ Q N N N+ ++ L
Sbjct: 17 HHSNSFINQKTLLFSKSFNSKFTSFSSQYNDN------NNPIKNEEQYNLEFENQDYGSS 70
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK PTAPWM+GPLLL+ ++ L+LS RKK + A + + AL+ K SG RG KAM
Sbjct: 71 SSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPNDALSGKVSGGRGKKAM 130
Query: 415 AKIVKSIDKLQQNKI 459
I + IDKLQ+ +I
Sbjct: 131 KMIYQGIDKLQETQI 145
>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum lycopersicum]
Length = 766
Score = 81.6 bits (200), Expect = 9e-14
Identities = 49/135 (36%), Positives = 72/135 (53%)
Frame = +1
Query: 55 HHSSSLMPATLFLQFYAYNPITSSFNPQSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXX 234
HH++S + L ++N ++F+ QSN N N+ + L
Sbjct: 17 HHANSFINQKTLLFSKSFNSKFTTFSSQSNDN------NNPIKKVEQCNLEFENQDYGSS 70
Query: 235 XXXIKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
IK PTAPWM+GPLLL+ +++L+LS RKK + A + + AL+ K SG RG KAM
Sbjct: 71 SSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQNPNDALSGKVSGGRGKKAM 130
Query: 415 AKIVKSIDKLQQNKI 459
I + IDKLQ+ +I
Sbjct: 131 KMIYQGIDKLQETQI 145
>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 244 IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKI 423
IK+PTAPWMKGPLLL+ +E+L+LS R K + +A EK D++LT K SG RG KAM KI
Sbjct: 73 IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132
Query: 424 VKSIDKLQQ 450
++SI KLQ+
Sbjct: 133 MQSIVKLQE 141
>gb|ESR43980.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
Length = 770
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/123 (39%), Positives = 72/123 (58%)
Frame = +1
Query: 91 LQFYAYNPITSSFNPQSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXXIKVPTAPWM 270
LQ + ++ I SS NP N+N K + + N + K+PTAPWM
Sbjct: 23 LQCHFFSVICSSSNP--NQNSPKTLKLPDIKLSPNAPIK-------------KMPTAPWM 67
Query: 271 KGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKIVKSIDKLQQ 450
+ P++L+ EI+ S P+ K S +K+DK LTAKESGVRG +AM KI+++I+KLQ+
Sbjct: 68 RSPIVLQPDEIIKPSKPKTKKS-----FKKTDKGLTAKESGVRGKQAMKKIIENIEKLQK 122
Query: 451 NKI 459
++I
Sbjct: 123 DQI 125
>ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, partial [Capsella rubella]
gi|482555852|gb|EOA20044.1| hypothetical protein
CARUB_v10000322mg, partial [Capsella rubella]
Length = 726
Score = 77.4 bits (189), Expect = 2e-12
Identities = 54/130 (41%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Frame = +1
Query: 73 MPATLFLQFYAYNPI--TSSFNPQSN-KNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXX 243
M A LFL A+ + SS NP N N K Q F ++
Sbjct: 29 MLAPLFLSARAFPSLITNSSLNPNQNPSNAAKTPQFDKFRENRGHS-----------DAA 77
Query: 244 IKVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKI 423
IKVPTAPWMKGPLLL+ EIL+ K S EK+ KAL +ESGVRG KAM KI
Sbjct: 78 IKVPTAPWMKGPLLLRPDEILDAEKRNKPRKS----EEKTFKALNRRESGVRGRKAMKKI 133
Query: 424 VKSIDKLQQN 453
V++++KL ++
Sbjct: 134 VRNVEKLDED 143
>gb|ESQ41603.1| hypothetical protein EUTSA_v10012836mg [Eutrema salsugineum]
Length = 698
Score = 75.9 bits (185), Expect = 5e-12
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Frame = +1
Query: 73 MPATLFLQFYAYNPI--TSSFNPQSN-KNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXX 243
M +LFL A+ + SS NP N N K Q FS +N+ +
Sbjct: 1 MLTSLFLSARAFPSLITNSSLNPSRNPSNASKIPQFDQFS--ENSRFSDAP--------- 49
Query: 244 IKVPT-APWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAK 420
IKVPT APWMKGPLL++ E+L+ S +K EK+ KAL +ESGVRG+KAM K
Sbjct: 50 IKVPTTAPWMKGPLLIRPDEVLDTSYRHEKRIRGQNAEEKTFKALNRRESGVRGSKAMKK 109
Query: 421 IVKSIDKLQQN 453
IV+ ++KL++N
Sbjct: 110 IVRKVEKLEEN 120
>ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [Arabidopsis
thaliana] gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor gi|332004875|gb|AED92258.1|
chloroplast splicing factor CRS1-like protein
[Arabidopsis thaliana]
Length = 720
Score = 74.3 bits (181), Expect = 1e-11
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Frame = +1
Query: 85 LFLQFYAYNPITSSFNPQSNKNYFKNSQ------NSSFSIDKNTELTXXXXXXXXXXXXI 246
L L ++ NP +F N + NSS K+++ I
Sbjct: 22 LLLCNFSDNPKLQTFTQMLNSLFLSARAFPSLITNSSSRRAKSSQFDQFRENRGVSDAAI 81
Query: 247 KVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKIV 426
KVPTAPWMKGPLLL+ EIL+ KK + EK+ KAL +ESGVRG KAM KIV
Sbjct: 82 KVPTAPWMKGPLLLRPDEILD----TKKRNKPRKVEEKTFKALNRRESGVRGKKAMKKIV 137
Query: 427 KSIDKLQQN 453
++++KL ++
Sbjct: 138 RNVEKLDED 146
>emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 74.3 bits (181), Expect = 1e-11
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Frame = +1
Query: 85 LFLQFYAYNPITSSFNPQSNKNYFKNSQ------NSSFSIDKNTELTXXXXXXXXXXXXI 246
L L ++ NP +F N + NSS K+++ I
Sbjct: 22 LLLCNFSDNPKLQTFTQMLNSLFLSARAFPSLITNSSSRRAKSSQFDQFRENRGVSDAAI 81
Query: 247 KVPTAPWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKIV 426
KVPTAPWMKGPLLL+ EIL+ KK + EK+ KAL +ESGVRG KAM KIV
Sbjct: 82 KVPTAPWMKGPLLLRPDEILD----TKKRNKPRKVEEKTFKALNRRESGVRGKKAMKKIV 137
Query: 427 KSIDKLQQN 453
++++KL ++
Sbjct: 138 RNVEKLDED 146
>ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis
lyrata subsp. lyrata]
Length = 727
Score = 73.2 bits (178), Expect = 3e-11
Identities = 58/148 (39%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Frame = +1
Query: 73 MPATLFLQFYAYNP--ITSSFNPQSN-KNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXX 243
M +L L AY I SS NP N N K+ Q F +
Sbjct: 1 MLTSLLLSARAYPSLIINSSLNPNQNPSNAAKSPQFDQFREKRGLS-----------DAA 49
Query: 244 IKVPTAPWMKGPLLLKSHEILNL---STPRKKNSS*NANIEKSDKALTAKESGVRGNKAM 414
+KVPTAPWMKGPLLL+ EI++ + PRK EK+ KAL +ESGVRG KAM
Sbjct: 50 MKVPTAPWMKGPLLLRPDEIVDTEKRNKPRKVE-------EKTFKALNRRESGVRGKKAM 102
Query: 415 AKIVKSIDKLQQ-NKIQLTHKLILMGFE 495
KIV++++KL + + + TH L FE
Sbjct: 103 KKIVRNVEKLDEGSDSEETHMDDLSEFE 130
>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 68.6 bits (166), Expect = 8e-10
Identities = 49/125 (39%), Positives = 66/125 (52%)
Frame = +1
Query: 82 TLFLQFYAYNPITSSFNPQSNKNYFKNSQNSSFSIDKNTELTXXXXXXXXXXXXIKVPTA 261
+LF Y+ I+SS P SN + N Q++S S IK PT
Sbjct: 9 SLFPNSYSRFHISSSLPPNSNNGH--NHQHTSPS-----------------QVPIKSPTP 49
Query: 262 PWMKGPLLLKSHEILNLSTPRKKNSS*NANIEKSDKALTAKESGVRGNKAMAKIVKSIDK 441
PWMK PLLL+ HE+++LS P+ K + E SDKAL KE VRG +AM KIV ++K
Sbjct: 50 PWMKVPLLLQPHELVDLSNPKSKKFKPEKH-ELSDKALMGKE--VRGKRAMKKIVDRVEK 106
Query: 442 LQQNK 456
L + +
Sbjct: 107 LHKTQ 111