BLASTX nr result

ID: Jatropha_contig00038602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038602
         (208 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                           57   2e-06
ref|XP_002534470.1| transcription initiation factor iib, putativ...    56   4e-06
ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|2...    55   7e-06
gb|ESQ49036.1| hypothetical protein EUTSA_v100213350mg, partial ...    55   9e-06
ref|XP_004493474.1| PREDICTED: transcription initiation factor I...    55   9e-06
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...    55   9e-06
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...    55   9e-06
ref|XP_003553400.1| PREDICTED: transcription initiation factor I...    55   9e-06
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...    55   9e-06

>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           MGDAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MGDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           MGDA+CSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MGDAYCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|222867352|gb|EEF04483.1|
           Transcription initiation factor IIB-1 family protein
           [Populus trichocarpa]
          Length = 312

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           MGDAFCSDCKR TEVVFDHSAGDTV
Sbjct: 1   MGDAFCSDCKRHTEVVFDHSAGDTV 25


>gb|ESQ49036.1| hypothetical protein EUTSA_v100213350mg, partial [Eutrema
           salsugineum]
          Length = 167

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_004493474.1| PREDICTED: transcription initiation factor IIB-like [Cicer
           arietinum]
          Length = 312

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_003553400.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 296

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 132 MGDAFCSDCKRQTEVVFDHSAGDTV 206
           M DAFCSDCKRQTEVVFDHSAGDTV
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTV 25


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