BLASTX nr result

ID: Jatropha_contig00038452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038452
         (663 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155034.1| PREDICTED: general transcription factor IIE ...    86   1e-14
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...    86   1e-14
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5...    86   1e-14
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...    85   2e-14
emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]    85   2e-14
ref|XP_006341650.1| PREDICTED: general transcription factor IIE ...    84   4e-14
ref|XP_006341649.1| PREDICTED: general transcription factor IIE ...    84   4e-14
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor...    84   5e-14
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor...    84   5e-14
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor...    84   5e-14
emb|CBI27327.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_004235735.1| PREDICTED: general transcription factor IIE ...    81   3e-13
gb|ESR54151.1| hypothetical protein CICLE_v10019993mg [Citrus cl...    80   4e-13
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ...    80   5e-13
ref|XP_004508577.1| PREDICTED: general transcription factor IIE ...    77   3e-12
ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810...    77   3e-12
gb|EMJ11181.1| hypothetical protein PRUPE_ppa005116mg [Prunus pe...    75   2e-11
ref|NP_001169634.1| hypothetical protein [Zea mays] gi|224030565...    74   3e-11
ref|NP_001141491.1| uncharacterized protein LOC100273603 [Zea ma...    74   3e-11
gb|ERN07435.1| hypothetical protein AMTR_s00019p00249820 [Ambore...    74   4e-11

>ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 403

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 41


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 475

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 41


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|550321822|gb|ERP51946.1|
           transcription initiation factor IIE alpha subunit family
           protein [Populus trichocarpa]
          Length = 472

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 41


>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MS+EPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV
Sbjct: 1   MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 41


>emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]
          Length = 729

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MS+EPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV
Sbjct: 1   MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 41


>ref|XP_006341650.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
           X2 [Solanum tuberosum]
          Length = 472

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDDITTKGDNQPK+GRSDNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAV 41


>ref|XP_006341649.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
           X1 [Solanum tuberosum]
          Length = 474

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDDITTKGDNQPK+GRSDNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAV 41


>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
           cacao]
          Length = 473

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDD+TTKGDNQPKTGR DNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAV 41


>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
           cacao]
          Length = 480

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDD+TTKGDNQPKTGR DNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAV 41


>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
           cacao]
          Length = 475

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLAARAFYDD+TTKGDNQPKTGR DNRGIAV
Sbjct: 1   MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAV 41


>emb|CBI27327.3| unnamed protein product [Vitis vinifera]
          Length = 166

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKLA RAFYDDITTKGDNQPKTGRSDNRGI V
Sbjct: 1   MSIEPFNRLVKLATRAFYDDITTKGDNQPKTGRSDNRGIVV 41


>ref|XP_004235735.1| PREDICTED: general transcription factor IIE subunit 1-like [Solanum
           lycopersicum]
          Length = 472

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIE FNRLVKLAARAFYDDITTKGDNQPK+GRSDNRGIAV
Sbjct: 1   MSIESFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAV 41


>gb|ESR54151.1| hypothetical protein CICLE_v10019993mg [Citrus clementina]
          Length = 474

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = +3

Query: 543 SIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           SIEPFNRLVKL ARAFYDDITTKGDNQPK+GRSDNRGIAV
Sbjct: 3   SIEPFNRLVKLVARAFYDDITTKGDNQPKSGRSDNRGIAV 42


>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
           [Fragaria vesca subsp. vesca]
          Length = 451

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFNRLVKL ARAFYDD+ TKGDNQPKTGRSDNRG+AV
Sbjct: 1   MSIEPFNRLVKLTARAFYDDLPTKGDNQPKTGRSDNRGLAV 41


>ref|XP_004508577.1| PREDICTED: general transcription factor IIE subunit 1-like [Cicer
           arietinum]
          Length = 474

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = +3

Query: 546 IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           IEP+N+LVKLAARAFYDD+T+KGDNQPKTGRSDNRGIAV
Sbjct: 2   IEPYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAV 40


>ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810405 [Glycine max]
          Length = 471

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = +3

Query: 546 IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           IEP+N+LVKLAARAFYDD+T+KGDNQPKTGRSDNRGIAV
Sbjct: 2   IEPYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAV 40


>gb|EMJ11181.1| hypothetical protein PRUPE_ppa005116mg [Prunus persica]
          Length = 476

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 540 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           MSIEPFN+LVKL  RAFYDDIT KGDNQPKTGRSDNRGIAV
Sbjct: 1   MSIEPFNKLVKLVGRAFYDDIT-KGDNQPKTGRSDNRGIAV 40


>ref|NP_001169634.1| hypothetical protein [Zea mays] gi|224030565|gb|ACN34358.1| unknown
           [Zea mays] gi|413934288|gb|AFW68839.1| hypothetical
           protein ZEAMMB73_761589 [Zea mays]
          Length = 143

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 543 SIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           SIEPFNRLVKLAARAFYDD++ KGDNQPKT R DNRG+AV
Sbjct: 3   SIEPFNRLVKLAARAFYDDVSMKGDNQPKTSRGDNRGMAV 42


>ref|NP_001141491.1| uncharacterized protein LOC100273603 [Zea mays]
           gi|194704782|gb|ACF86475.1| unknown [Zea mays]
           gi|195625466|gb|ACG34563.1| RNA polymerase II
           transcription factor/ transcription initiation factor
           [Zea mays] gi|223947847|gb|ACN28007.1| unknown [Zea
           mays] gi|413934289|gb|AFW68840.1| RNA polymerase II
           transcription factor/ transcription initiation factor
           [Zea mays]
          Length = 460

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 543 SIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           SIEPFNRLVKLAARAFYDD++ KGDNQPKT R DNRG+AV
Sbjct: 3   SIEPFNRLVKLAARAFYDDVSMKGDNQPKTSRGDNRGMAV 42


>gb|ERN07435.1| hypothetical protein AMTR_s00019p00249820 [Amborella trichopoda]
          Length = 229

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 543 SIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAV 662
           S++ F RLVKLAARAFYDDI+TKGDNQPKTGRSDNRG+AV
Sbjct: 3   SVDSFKRLVKLAARAFYDDISTKGDNQPKTGRSDNRGMAV 42


Top