BLASTX nr result

ID: Jatropha_contig00038433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038433
         (688 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512667.1| conserved hypothetical protein [Ricinus comm...   144   2e-32

>ref|XP_002512667.1| conserved hypothetical protein [Ricinus communis]
           gi|223548628|gb|EEF50119.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 518

 Score =  144 bits (364), Expect = 2e-32
 Identities = 83/181 (45%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
 Frame = +3

Query: 120 MGREYHGSSNSTKNSKKQESGRKVVESCVTKKSVQNVRKIKSEGFLLKRRVSPRLKSIPE 299
           MG EY GS+N  KNS +QE+    + S V +K VQ V+KI+ +GF L+RRVSPRLK+I +
Sbjct: 1   MGSEYSGSNNYAKNSTEQENQNDGLNSTVNEKIVQQVQKIRPKGFFLERRVSPRLKNISK 60

Query: 300 DKRPYYGSAQRRRLNFSKDFCSRKFEDDNQKTQSNSGEGNAGPDKAKVDVTARRKLMQHA 479
           DKRPYYGS QRR L+ S++                              +TAR  L QHA
Sbjct: 61  DKRPYYGSGQRRSLHSSEN------------------------------ITARNNLYQHA 90

Query: 480 PKLRPEGLLSSRRVSPRFRDIPADKRPYYGCAQRRHSHDSKYRCEKE-TEDNNCRRQLYS 656
           P +R EG L  RR SPR + I AD+RPYYG  QRR  +  K    K+ TE N  +R+LYS
Sbjct: 91  PNVRSEGFLLERRSSPRLKHISADRRPYYGSGQRRQLYAPKGDIHKKITEGNEWKRRLYS 150

Query: 657 P 659
           P
Sbjct: 151 P 151



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = +3

Query: 132 YHGSSNSTKNSKKQESGRKVVESCVTKKSVQNVRKIKSEGFLLKRRVSPRLKSIPEDKRP 311
           Y  S N TK++ KQE+  +V++  + K   Q  +  +S+G LL RRVSPRLK++P+DKRP
Sbjct: 329 YKSSDNYTKSASKQETDNEVLDVTMRKTVAQQFQNKESQGLLLGRRVSPRLKNVPKDKRP 388

Query: 312 YYGSAQRRRLNFSKDF-CSRKFEDDNQKTQSNSGEGNAGPDKAKVDVTARRKLMQHAPK 485
           YYGS   R+ N +KD+ CS    + + K + NS + +    K K+D   ++ L+  A K
Sbjct: 389 YYGSTHNRQSNAAKDYVCS----NSDWKRKLNSPKDDMTKKKTKIDWVMQKCLLNVARK 443



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +3

Query: 429 DKAKVDVTARRKLMQHAPKLRPEGLLSSRRVSPRFRDIPADKRPYYGCAQRRHSHDSK-Y 605
           D   +DVT R+ + Q       +GLL  RRVSPR +++P DKRPYYG    R S+ +K Y
Sbjct: 345 DNEVLDVTMRKTVAQQFQNKESQGLLLGRRVSPRLKNVPKDKRPYYGSTHNRQSNAAKDY 404

Query: 606 RCEKETEDNNCRRQLYSPIDGFERGK 683
            C     +++ +R+L SP D   + K
Sbjct: 405 VC----SNSDWKRKLNSPKDDMTKKK 426


Top