BLASTX nr result

ID: Jatropha_contig00038325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038325
         (514 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510562.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
gb|EEE82949.2| hypothetical protein POPTR_0001s23150g [Populus t...    56   5e-06
ref|XP_002298144.1| predicted protein [Populus trichocarpa]            56   5e-06
ref|XP_004959871.1| PREDICTED: F-box protein At3g07870-like [Set...    55   7e-06

>ref|XP_002510562.1| conserved hypothetical protein [Ricinus communis]
           gi|223551263|gb|EEF52749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 84  MPLECFIWIQHCWNERFKKFLNRKEGKFQHLPDSIIVEILSRLPSEQLSNCQLVCRKFRD 263
           M  ECFIWI H W E    F   K G  + LP+ II EILSRLP++++  C  V ++++ 
Sbjct: 1   MEFECFIWIVHIWKELLSIFPPLKGGDVRPLPNDIIFEILSRLPADEVLKCCSVSKEWKA 60

Query: 264 LTSTPYFRKIHSVKRASPIVLVQYFNPGIH--DKDMQVYLLDEKTKD 398
           L  TP+F +   + RA PIV +QY  P  H     + V+ LD+  K+
Sbjct: 61  LVLTPFFSQA-QLTRACPIVFIQYRRPESHFFMHGLDVFFLDQGAKN 106


>gb|EEE82949.2| hypothetical protein POPTR_0001s23150g [Populus trichocarpa]
          Length = 370

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +3

Query: 174 LPDSIIVEILSRLPSEQLSNCQLVCRKFRDLTSTPYFRKIHSVK 305
           LP  I V+ILSRLP E ++ C+ VC+ +RDL STPYF ++H  K
Sbjct: 24  LPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAK 67


>ref|XP_002298144.1| predicted protein [Populus trichocarpa]
          Length = 391

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +3

Query: 174 LPDSIIVEILSRLPSEQLSNCQLVCRKFRDLTSTPYFRKIHSVK 305
           LP  I V+ILSRLP E ++ C+ VC+ +RDL STPYF ++H  K
Sbjct: 24  LPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAK 67


>ref|XP_004959871.1| PREDICTED: F-box protein At3g07870-like [Setaria italica]
          Length = 218

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = +3

Query: 153 KEGKFQHLPDSIIVEILSRLPSEQLSNCQLVCRKFRDLTSTPYFRKIHSVKRASPIVLVQ 332
           K+  F  LPD  I +IL RLP+E +     VC+ +R  T+ P F   H+  + + +V+  
Sbjct: 14  KDTPFSSLPDDTIADILLRLPAESVLCAGAVCKAWRSFTTDPSFLAAHARLQQAQVVMYS 73

Query: 333 YFNPGIHDKDMQV--YLLDEKTKDENQKLNCTGRFFMYCLILCSCNGLILF 479
           Y + G ++  + V  +  D+      + +          L+L SCNG++LF
Sbjct: 74  YLDEGPYELALDVVPFSGDDDEAARRRLIRYPRTTRTRFLLLASCNGVLLF 124


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