BLASTX nr result

ID: Jatropha_contig00038042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00038042
         (379 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus ...    63   3e-08
gb|EEE80016.2| hypothetical protein POPTR_0002s03250g [Populus t...    61   2e-07
ref|XP_002300743.1| predicted protein [Populus trichocarpa]            61   2e-07

>ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus communis]
           gi|223551145|gb|EEF52631.1| GTP-binding protein hflx,
           putative [Ricinus communis]
          Length = 541

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +2

Query: 68  MIACHC-SLIRPSPPINENYLLRSPNP-NKLNXXXXXXXXXXXXXXXRLITRVLQEGVEV 241
           MIAC+C S +RPSP ++++Y   + NP N+ N               RL TRVLQ+G EV
Sbjct: 1   MIACYCNSPVRPSP-LHDHYFPWNSNPYNRPNYPLTLSTHKS-----RLTTRVLQQGFEV 54

Query: 242 VSPKDVSLPGPVIDTKEDKEEVHGLVNGVAGTVSE 346
            SP +   PG +I   E  EEVHG VNGVAG  SE
Sbjct: 55  ASPINAPFPGQLIYNNE-VEEVHGPVNGVAGPASE 88


>gb|EEE80016.2| hypothetical protein POPTR_0002s03250g [Populus trichocarpa]
          Length = 539

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 68  MIACHCSLIRP-SPPINENYLLRSPNPNKLNXXXXXXXXXXXXXXXRLITRVLQEGVEVV 244
           MI  HCSL RP  P  +E Y      PN                  +L   VL +G EVV
Sbjct: 1   MIVSHCSLTRPWHPSTHEPYF-----PNLKKPKFPLIFTSSITYSLKLTAHVLPQGTEVV 55

Query: 245 SPKDVSLPGPVIDTKEDK-EEVHGLVNGVAGTVSE 346
           SP +V +  PVI+T E K EEVHG+ NGVA T SE
Sbjct: 56  SPDNVLVQNPVIETIEAKEEEVHGVFNGVASTKSE 90


>ref|XP_002300743.1| predicted protein [Populus trichocarpa]
          Length = 289

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 68  MIACHCSLIRP-SPPINENYLLRSPNPNKLNXXXXXXXXXXXXXXXRLITRVLQEGVEVV 244
           MI  HCSL RP  P  +E Y      PN                  +L   VL +G EVV
Sbjct: 1   MIVSHCSLTRPWHPSTHEPYF-----PNLKKPKFPLIFTSSITYSLKLTAHVLPQGTEVV 55

Query: 245 SPKDVSLPGPVIDTKEDK-EEVHGLVNGVAGTVSE 346
           SP +V +  PVI+T E K EEVHG+ NGVA T SE
Sbjct: 56  SPDNVLVQNPVIETIEAKEEEVHGVFNGVASTKSE 90


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