BLASTX nr result
ID: Jatropha_contig00037921
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00037921 (568 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN7... 375 e-102 ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot escul... 343 1e-92 gb|ABV65755.1| RNA polymerase beta'' subunit, partial (chloropla... 343 1e-92 ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasili... 342 3e-92 ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus co... 331 6e-89 gb|ABD93816.1| RNA polymerase beta chain [Euphorbia milii var. s... 331 6e-89 gb|ABV65748.1| RNA polymerase beta'' subunit, partial (chloropla... 325 4e-87 gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloropla... 320 1e-85 gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloropla... 320 1e-85 gb|ABV65732.1| RNA polymerase beta'' subunit, partial (chloropla... 315 4e-84 gb|ABV65761.1| RNA polymerase beta'' subunit, partial (chloropla... 315 5e-84 gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloropla... 314 8e-84 gb|ABV65778.1| RNA polymerase beta'' subunit, partial (chloropla... 312 3e-83 gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea] 312 4e-83 ref|YP_004072452.1| RNA polymerase beta II subunit [Corynocarpus... 310 2e-82 gb|AEH42620.1| RNA polymerase beta subunit [Garcinia mangostana] 310 2e-82 gb|ABV65780.1| RNA polymerase beta'' subunit, partial (chloropla... 310 2e-82 gb|ABV65731.1| RNA polymerase beta'' subunit, partial (chloropla... 310 2e-82 gb|ABV65724.1| RNA polymerase beta'' subunit, partial (chloropla... 310 2e-82 gb|ABV65779.1| RNA polymerase beta'' subunit, partial (chloropla... 309 3e-82 >ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN72682.1| rpoC2 [Jatropha curcas] Length = 1394 Score = 375 bits (963), Expect = e-102 Identities = 187/189 (98%), Positives = 187/189 (98%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE Sbjct: 732 IHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 791 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD Sbjct: 792 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 851 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN Sbjct: 852 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 911 Query: 542 INPFYPFYS 568 INPFYP YS Sbjct: 912 INPFYPIYS 920 >ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot esculenta] gi|212288328|sp|B1NWE0.1|RPOC2_MANES RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta''; Short=RNA polymerase subunit beta'' gi|157695875|gb|ABV66144.1| RNA polymerase beta subunit [Manihot esculenta] Length = 1393 Score = 343 bits (881), Expect = 1e-92 Identities = 172/189 (91%), Positives = 176/189 (93%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHS LIPPGTVKTNSKESKKVKNWIYIQRIT KKKYFVLVRPVIIYE Sbjct: 727 IHFPGETDKISRHSDILIPPGTVKTNSKESKKVKNWIYIQRITPTKKKYFVLVRPVIIYE 786 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 787 IANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQLVRTCLVLNWDQD 846 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARA+FVE+STNGLI DFLRINL K HISYI RKRNDPSGS PISNN SDRTN Sbjct: 847 KKSSSIEEARAAFVEISTNGLIRDFLRINLVKFHISYIGRKRNDPSGSEPISNNGSDRTN 906 Query: 542 INPFYPFYS 568 INPFYP YS Sbjct: 907 INPFYPIYS 915 >gb|ABV65755.1| RNA polymerase beta'' subunit, partial (chloroplast) [Manihot esculenta] Length = 1281 Score = 343 bits (881), Expect = 1e-92 Identities = 172/189 (91%), Positives = 176/189 (93%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHS LIPPGTVKTNSKESKKVKNWIYIQRIT KKKYFVLVRPVIIYE Sbjct: 697 IHFPGETDKISRHSDILIPPGTVKTNSKESKKVKNWIYIQRITPTKKKYFVLVRPVIIYE 756 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 757 IANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQLVRTCLVLNWDQD 816 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARA+FVE+STNGLI DFLRINL K HISYI RKRNDPSGS PISNN SDRTN Sbjct: 817 KKSSSIEEARAAFVEISTNGLIRDFLRINLVKFHISYIGRKRNDPSGSEPISNNGSDRTN 876 Query: 542 INPFYPFYS 568 INPFYP YS Sbjct: 877 INPFYPIYS 885 >ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasiliensis] gi|308523496|gb|ADO33546.1| RNA polymerase beta'' subunit [Hevea brasiliensis] Length = 1395 Score = 342 bits (878), Expect = 3e-92 Identities = 172/189 (91%), Positives = 176/189 (93%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG L+PPGTVKTNSKESKKVKNWIYIQRIT KKKYFVLVRPVIIYE Sbjct: 727 IHFPGETDKISRHSGILMPPGTVKTNSKESKKVKNWIYIQRITPTKKKYFVLVRPVIIYE 786 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 787 IANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQLVRTCLVLNWDQD 846 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARA FVE+STNGLI DFLRINL KSHISYI RKRNDPSGS ISNN SDRTN Sbjct: 847 KKSSSIEEARAFFVEISTNGLIRDFLRINLVKSHISYIGRKRNDPSGSELISNNGSDRTN 906 Query: 542 INPFYPFYS 568 INPFYP YS Sbjct: 907 INPFYPIYS 915 >ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus communis] gi|339516155|gb|AEJ82545.1| RNA polymerase beta subunit [Ricinus communis] Length = 1405 Score = 331 bits (849), Expect = 6e-89 Identities = 166/188 (88%), Positives = 174/188 (92%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPG VKTNSKESKK KNWIYIQRI +KKYFVLVR VIIYE Sbjct: 731 IHFPGETDKISRHSGILIPPGMVKTNSKESKKQKNWIYIQRIAPTRKKYFVLVRLVIIYE 790 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IA+GINLETLFP+DLLQEK+NLKLRVVNYIL GNGK IRGISDTSIQLVRTCLVLNWDQ+ Sbjct: 791 IANGINLETLFPRDLLQEKDNLKLRVVNYILSGNGKPIRGISDTSIQLVRTCLVLNWDQE 850 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEV+TNGLI DFLRINL KSHISYISRKRNDPSGSGPISNN ++ TN Sbjct: 851 KKSSSIEEARASFVEVNTNGLIRDFLRINLVKSHISYISRKRNDPSGSGPISNNGANHTN 910 Query: 542 INPFYPFY 565 INPFYP Y Sbjct: 911 INPFYPIY 918 >gb|ABD93816.1| RNA polymerase beta chain [Euphorbia milii var. splendens] Length = 814 Score = 331 bits (849), Expect = 6e-89 Identities = 171/192 (89%), Positives = 174/192 (90%), Gaps = 3/192 (1%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPGTVKT+SKESKKVKNWIYIQRIT KKKYFVLVRPVIIYE Sbjct: 253 IHFPGETDKISRHSGILIPPGTVKTHSKESKKVKNWIYIQRITPTKKKYFVLVRPVIIYE 312 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IA+GINLETLFP DLLQEK+NLKLRVVNYILYGN K IRGISDTSIQLVRTCLVLNWDQD Sbjct: 313 IANGINLETLFPADLLQEKDNLKLRVVNYILYGNSKPIRGISDTSIQLVRTCLVLNWDQD 372 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYIS---RKRNDPSGSGPISNNESD 532 KKSSSIEEARASFVEVSTNGLI DFLRINL KS I YIS R RNDPSG GPISNN SD Sbjct: 373 KKSSSIEEARASFVEVSTNGLIRDFLRINLLKSKIFYISSRTRNRNDPSGLGPISNNGSD 432 Query: 533 RTNINPFYPFYS 568 TNINPFYP YS Sbjct: 433 PTNINPFYPSYS 444 >gb|ABV65748.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ixonanthes icosandra x Ixonanthes cuneata] Length = 1262 Score = 325 bits (834), Expect = 4e-87 Identities = 165/189 (87%), Positives = 172/189 (91%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHF GETDKISR+SG LIPPGTVKTNSKESKKVKNWIY+ RIT KKKYFVLVRPVIIYE Sbjct: 694 IHFLGETDKISRYSGILIPPGTVKTNSKESKKVKNWIYVHRITPTKKKYFVLVRPVIIYE 753 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINLET FP DLLQEK+NLKLRVVNYILYGNGK I+GISD SIQLVRTCLVLNWDQD Sbjct: 754 IADGINLETFFPPDLLQEKDNLKLRVVNYILYGNGKPIQGISDASIQLVRTCLVLNWDQD 813 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEVSTNGLI DFL+INL KSHISYISRK NDPSGS IS++ SDRTN Sbjct: 814 KKSSSIEEARASFVEVSTNGLIRDFLKINLVKSHISYISRKGNDPSGSELISDHGSDRTN 873 Query: 542 INPFYPFYS 568 INPFY YS Sbjct: 874 INPFYSIYS 882 >gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloroplast) [Leonia glycycarpa] Length = 1274 Score = 320 bits (821), Expect = 1e-85 Identities = 163/189 (86%), Positives = 169/189 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPG+TDKISR+SG LI PG VKTNSKESKKVKNWIY+QRIT KKKYFVLVRPVIIYE Sbjct: 694 IHFPGKTDKISRYSGILISPGPVKTNSKESKKVKNWIYVQRITPTKKKYFVLVRPVIIYE 753 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINLETLF DLLQEK NLKLRVVNYILYGNGK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 754 IADGINLETLFYSDLLQEKNNLKLRVVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQD 813 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFV++STNGLI DFLRINL KSH YISRKRN PS SG IS+N DRTN Sbjct: 814 KKSSSIEEARASFVKISTNGLIRDFLRINLVKSHFFYISRKRNGPSSSGSISDNGLDRTN 873 Query: 542 INPFYPFYS 568 INPFY YS Sbjct: 874 INPFYFLYS 882 >gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloroplast) [Eucryphia lucida] Length = 1280 Score = 320 bits (820), Expect = 1e-85 Identities = 163/185 (88%), Positives = 170/185 (91%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPGTVK NSKESKK+KNWIY+QRIT KKKYFVLVRPVIIYE Sbjct: 696 IHFPGETDKISRHSGILIPPGTVKKNSKESKKLKNWIYVQRITPTKKKYFVLVRPVIIYE 755 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQDLLQE++NL+LRVVNYILYGNGK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 756 IADGINLATLFPQDLLQERDNLQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQD 815 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEA ASFVEVSTN LI DFLRI+L KSHISYI RKRNDPSGSG IS+N SD T Sbjct: 816 KKSSSIEEAPASFVEVSTNSLIRDFLRIDLVKSHISYI-RKRNDPSGSGLISDNGSDHTT 874 Query: 542 INPFY 556 INPFY Sbjct: 875 INPFY 879 >gb|ABV65732.1| RNA polymerase beta'' subunit, partial (chloroplast) [Elatine triandra] Length = 692 Score = 315 bits (808), Expect = 4e-84 Identities = 164/193 (84%), Positives = 169/193 (87%), Gaps = 4/193 (2%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISR SG LIPPGTVKTNSK+SKK KNWIY+QRIT KKKY VLVRPVIIYE Sbjct: 103 IHFPGETDKISRDSGILIPPGTVKTNSKKSKKGKNWIYVQRITPTKKKYCVLVRPVIIYE 162 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGI----SDTSIQLVRTCLVLN 349 IADGINL TLFPQDLLQEK+NLKLRVVNYILY NGK IRGI SIQLVRTCLVLN Sbjct: 163 IADGINLATLFPQDLLQEKDNLKLRVVNYILYENGKPIRGIXXXXXXXSIQLVRTCLVLN 222 Query: 350 WDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNES 529 WDQDKK SSIEEARASFVEV TNGLI DFLRINL KSHISYISRKRNDPSGSG IS+NES Sbjct: 223 WDQDKKGSSIEEARASFVEVRTNGLIRDFLRINLVKSHISYISRKRNDPSGSGLISDNES 282 Query: 530 DRTNINPFYPFYS 568 + TNINPFY YS Sbjct: 283 NPTNINPFYSLYS 295 >gb|ABV65761.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ochna mossambicensis] Length = 1268 Score = 315 bits (807), Expect = 5e-84 Identities = 161/185 (87%), Positives = 167/185 (90%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPG VKTNSKESKKVKNWIY+QRIT KKK+FVLVRPVIIYE Sbjct: 693 IHFPGETDKISRHSGILIPPGRVKTNSKESKKVKNWIYVQRITPTKKKHFVLVRPVIIYE 752 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINLETLFPQ LL+EKENLKLRVVNYI YGNGK IRGISDT+IQLVRTCLVLNWDQD Sbjct: 753 IADGINLETLFPQGLLKEKENLKLRVVNYIFYGNGKPIRGISDTNIQLVRTCLVLNWDQD 812 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEA ASFVEVSTNGLI DFLRI K HISYISRKRNDPSGSG +S+N D T Sbjct: 813 KKSSSIEEAHASFVEVSTNGLIRDFLRI---KCHISYISRKRNDPSGSGVLSDNGPDHTI 869 Query: 542 INPFY 556 INPFY Sbjct: 870 INPFY 874 >gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloroplast) [Phyllanthus calycinus] Length = 1271 Score = 314 bits (805), Expect = 8e-84 Identities = 159/189 (84%), Positives = 170/189 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPP TVKTNSKESKKVKNWIY+QRIT KKK+FVLVRPVI++E Sbjct: 692 IHFPGETDKISRHSGILIPPETVKTNSKESKKVKNWIYVQRITPTKKKFFVLVRPVILFE 751 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 I DGINLE LFPQDLLQEK++LKLR+VNYILYGNGK IRGISDTSIQLVRTCLVL WDQD Sbjct: 752 IVDGINLEKLFPQDLLQEKDDLKLRIVNYILYGNGKPIRGISDTSIQLVRTCLVLTWDQD 811 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 +KS EEA SFVEVSTNGLI +FLRINLAKS ISYISRKRNDPSGSG IS+N SDRTN Sbjct: 812 QKS---EEAHVSFVEVSTNGLIHEFLRINLAKSPISYISRKRNDPSGSGLISDNGSDRTN 868 Query: 542 INPFYPFYS 568 +NPFY YS Sbjct: 869 MNPFYSIYS 877 >gb|ABV65778.1| RNA polymerase beta'' subunit, partial (chloroplast) [Strasburgeria robusta] Length = 1281 Score = 312 bits (800), Expect = 3e-83 Identities = 159/185 (85%), Positives = 169/185 (91%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKISRHSG LIPPGT K NSKESKK+KNWIY+QRIT KKKYFVLVRPV+ YE Sbjct: 695 IHFPGETDKISRHSGILIPPGTGKRNSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYE 754 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQDLL+E +N++LRVVNYILYGNGK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 755 IADGINLATLFPQDLLREGDNMQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQD 814 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEVSTNGLI DFLRI+L KSHISYI RKRND SGSG IS+N S+RT Sbjct: 815 KKSSSIEEARASFVEVSTNGLIRDFLRIDLVKSHISYI-RKRNDLSGSGLISDNGSNRTK 873 Query: 542 INPFY 556 INPFY Sbjct: 874 INPFY 878 >gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea] Length = 802 Score = 312 bits (799), Expect = 4e-83 Identities = 159/189 (84%), Positives = 169/189 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGETDKI+RHSG LIPPGT KTNSKESKK+KNWIY+QRIT KKKYFVLVRPV+ YE Sbjct: 239 IHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYE 298 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQDLLQE++N+KLRVVNYILYGNGK IRGI DTSIQLVRTCLVLNWDQD Sbjct: 299 IADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLNWDQD 358 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSI EA ASFVEV TNGLI DFLRI+L KS ISY + KRNDPSGSG IS+N SDRTN Sbjct: 359 KKSSSIGEAYASFVEVRTNGLIRDFLRIDLVKSPISY-TGKRNDPSGSGLISDNGSDRTN 417 Query: 542 INPFYPFYS 568 INPFY YS Sbjct: 418 INPFYSTYS 426 >ref|YP_004072452.1| RNA polymerase beta II subunit [Corynocarpus laevigata] gi|309252880|gb|ADO60300.1| RNA polymerase beta II subunit [Corynocarpus laevigata] Length = 1380 Score = 310 bits (794), Expect = 2e-82 Identities = 158/189 (83%), Positives = 170/189 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPG+ DKISRH+G LIPP +K SK+SK++KNWIY+Q IT KKKYFVLVRPVIIYE Sbjct: 715 IHFPGKMDKISRHNGILIPPERLKKISKKSKQLKNWIYVQWITPNKKKYFVLVRPVIIYE 774 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQDLLQE++NL+LRVVNYILYGNGK IRGIS TSIQLVRTCLVLNWDQD Sbjct: 775 IADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLVLNWDQD 834 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEVSTNGL+ DFLRI+L KSHISYI RKR DPSGSG ISNNESDRTN Sbjct: 835 KKSSSIEEARASFVEVSTNGLVRDFLRIDLVKSHISYI-RKRKDPSGSGLISNNESDRTN 893 Query: 542 INPFYPFYS 568 INPFY YS Sbjct: 894 INPFYSIYS 902 >gb|AEH42620.1| RNA polymerase beta subunit [Garcinia mangostana] Length = 1334 Score = 310 bits (793), Expect = 2e-82 Identities = 156/189 (82%), Positives = 170/189 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFPGE DKISRHSG LIPP VKTN KESKKVKNWIY+QRIT +KKKYFVLVRPVIIYE Sbjct: 708 IHFPGEIDKISRHSGILIPPQRVKTNFKESKKVKNWIYVQRITPSKKKYFVLVRPVIIYE 767 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINLETLFPQDLLQEKENLKLRVVN+ILYGNGK IRGISDTSIQLVRT LVLNW+QD Sbjct: 768 IADGINLETLFPQDLLQEKENLKLRVVNFILYGNGKPIRGISDTSIQLVRTSLVLNWEQD 827 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KK+SS+EEAR SF+EV+TNGLI DFL+I+L +SHISYISRKRND SGSG IS+N RTN Sbjct: 828 KKNSSVEEARPSFIEVNTNGLIRDFLKIHLVESHISYISRKRNDSSGSGLISDNGPARTN 887 Query: 542 INPFYPFYS 568 +N F+ YS Sbjct: 888 MNLFFSVYS 896 >gb|ABV65780.1| RNA polymerase beta'' subunit, partial (chloroplast) [Suriana maritima] Length = 1274 Score = 310 bits (793), Expect = 2e-82 Identities = 159/192 (82%), Positives = 169/192 (88%), Gaps = 3/192 (1%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVK---TNSKESKKVKNWIYIQRITSAKKKYFVLVRPVI 172 IHFPGE DKISRH+G LIPPGTVK + KESKK+KNWIY+Q IT KKKYFVLVRPVI Sbjct: 696 IHFPGEMDKISRHNGILIPPGTVKKKNSKDKESKKIKNWIYVQWITPTKKKYFVLVRPVI 755 Query: 173 IYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNW 352 IYEIADGINL TLFP DL QE++NL+L+VVNYILYGNGK IRGISDTSIQLVRTCLVLNW Sbjct: 756 IYEIADGINLVTLFPPDLFQERDNLELKVVNYILYGNGKPIRGISDTSIQLVRTCLVLNW 815 Query: 353 DQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESD 532 DQDKKSSSIEE ASFVEVSTNGLI DFLRI+L KSHISYI RKRND SGSG IS+NESD Sbjct: 816 DQDKKSSSIEETHASFVEVSTNGLIRDFLRIDLVKSHISYI-RKRNDASGSGLISDNESD 874 Query: 533 RTNINPFYPFYS 568 RTNINPFY YS Sbjct: 875 RTNINPFYSIYS 886 >gb|ABV65731.1| RNA polymerase beta'' subunit, partial (chloroplast) [Elaeocarpus angustifolius] Length = 1263 Score = 310 bits (793), Expect = 2e-82 Identities = 157/185 (84%), Positives = 166/185 (89%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 I+FPGETDKISRH LIPPGTVK NSKESKK+KNWIY+QRIT KKKYFVLVRP IIYE Sbjct: 692 IYFPGETDKISRHGDILIPPGTVKKNSKESKKLKNWIYVQRITPTKKKYFVLVRPAIIYE 751 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQDLLQE++NL+LR+VNYILYGNGK IRGISDTSIQLVRTCLVLNWDQD Sbjct: 752 IADGINLATLFPQDLLQERDNLQLRIVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQD 811 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEA SFVEVSTN LI DFLRI+L KSHI YI RKRNDPSGSG I +N SDRTN Sbjct: 812 KKSSSIEEAPTSFVEVSTNSLIRDFLRIDLVKSHILYI-RKRNDPSGSGLIFDNGSDRTN 870 Query: 542 INPFY 556 INPFY Sbjct: 871 INPFY 875 >gb|ABV65724.1| RNA polymerase beta'' subunit, partial (chloroplast) [Coriaria nepalensis] Length = 1283 Score = 310 bits (793), Expect = 2e-82 Identities = 160/189 (84%), Positives = 168/189 (88%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKTNSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIYE 181 IHFP E DKISRHSG LIPP K NSK+SKK+KNWIY+Q IT KKKYFVLVRPVIIYE Sbjct: 698 IHFPVEIDKISRHSGILIPPERGKKNSKKSKKLKNWIYVQWITPTKKKYFVLVRPVIIYE 757 Query: 182 IADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQD 361 IADGINL TLFPQD LQE++NL+LRVVNYILYGNGK IRGIS TSIQLVRTCLVL WDQD Sbjct: 758 IADGINLVTLFPQDPLQERDNLELRVVNYILYGNGKRIRGISGTSIQLVRTCLVLTWDQD 817 Query: 362 KKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRTN 541 KKSSSIEEARASFVEVSTNGL+ DFLRI+LAKSHISYI RKR DPSGSG ISNNESDRTN Sbjct: 818 KKSSSIEEARASFVEVSTNGLVRDFLRIDLAKSHISYI-RKRKDPSGSGLISNNESDRTN 876 Query: 542 INPFYPFYS 568 INPFY YS Sbjct: 877 INPFYSTYS 885 >gb|ABV65779.1| RNA polymerase beta'' subunit, partial (chloroplast) [Stylobasium spathulatum] Length = 1266 Score = 309 bits (792), Expect = 3e-82 Identities = 160/189 (84%), Positives = 169/189 (89%), Gaps = 1/189 (0%) Frame = +2 Query: 2 IHFPGETDKISRHSGTLIPPGTVKT-NSKESKKVKNWIYIQRITSAKKKYFVLVRPVIIY 178 IHFPGE DKISRHSG LIPPGTVK NSKESKK KNWIY+Q IT KKKYFVLVRPVIIY Sbjct: 695 IHFPGELDKISRHSGILIPPGTVKNKNSKESKKWKNWIYVQWITPTKKKYFVLVRPVIIY 754 Query: 179 EIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQLVRTCLVLNWDQ 358 EIADGINL TLFPQDLLQE++NL+L+VVNYILYGNGK IRGISDTSIQLVRTCLVLNWDQ Sbjct: 755 EIADGINLVTLFPQDLLQERDNLELKVVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQ 814 Query: 359 DKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSGSGPISNNESDRT 538 DKKSSSIEEA ASFVEVS G+I DFLRI+L KSHISYI RKRND SGSG IS+NESDRT Sbjct: 815 DKKSSSIEEAHASFVEVSIKGIIQDFLRIDLVKSHISYI-RKRNDASGSGFISDNESDRT 873 Query: 539 NINPFYPFY 565 NINPF+ Y Sbjct: 874 NINPFFSIY 882