BLASTX nr result

ID: Jatropha_contig00037828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037828
         (512 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...    59   8e-07
ref|XP_002326121.1| predicted protein [Populus trichocarpa]            55   9e-06

>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 47/102 (46%), Positives = 58/102 (56%)
 Frame = +3

Query: 150 MVVLRNREILPTEPTPKYLTKQSTPEPVTPNPIHEXXXXXXXXXXXXXXXNLENHELGSD 329
           MV+LR+R+IL   P+ K     S PEPVTP    E               +L +HELGSD
Sbjct: 1   MVMLRSRKILC--PSTK-----SLPEPVTPAQTREPSTRRL---------SLPSHELGSD 44

Query: 330 CKSTLRRSLRLASKSVAADGYVENGSRKRKGATSIRSMEENK 455
             ST RRSLRLASKSV  D   +NGSRKRK ++  +  EE +
Sbjct: 45  --STRRRSLRLASKSVPRD---QNGSRKRKISSIEKEKEETE 81


>ref|XP_002326121.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +3

Query: 150 MVVLRNREILPTEPTPKYLTKQSTPEPVTPNPIHEXXXXXXXXXXXXXXXNLENHELGSD 329
           M VLR+R ILPT P+ K   K  TPEPVTP    E               +L    LGSD
Sbjct: 1   MAVLRSRGILPTIPSNK---KGPTPEPVTPTRTREPSTHQSPPTPNPPGVSL----LGSD 53

Query: 330 CKSTLRRSLRLASKSV-AADGYVENGSRKRKGATSIRSMEENKVVEDQIVNEG 485
                RRSLRLASKS+ +AD  +   +RKRK  +  +        + ++VNEG
Sbjct: 54  SAPPRRRSLRLASKSLPSADASLLTPTRKRKKGSDGK--------QGRLVNEG 98


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