BLASTX nr result

ID: Jatropha_contig00037671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037671
         (632 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY26660.1| RING/U-box superfamily protein [Theobroma cacao]        74   4e-11
ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...    73   7e-11
ref|XP_002517522.1| ring finger protein, putative [Ricinus commu...    72   2e-10
gb|EMJ16628.1| hypothetical protein PRUPE_ppa006140mg [Prunus pe...    65   1e-09
ref|XP_004302944.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    65   1e-09

>gb|EOY26660.1| RING/U-box superfamily protein [Theobroma cacao]
          Length = 417

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = +1

Query: 454 LLIERMESHGDSEHIIDITRNDDASSHSSHYDQPPEVDLPQREER-SSSASGPTHQ 618
           LL+ER+ESH D EHIIDITR+DDASS SSH +QPP ++L Q E+R SSS   PT+Q
Sbjct: 18  LLMERVESHSDQEHIIDITRHDDASSSSSHDEQPPGLNLAQSEDRPSSSTQAPTNQ 73


>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
           product [Vitis vinifera]
          Length = 416

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 38/56 (67%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +1

Query: 454 LLIERMESHGDSEHIIDITRNDDASSHSSHYDQPPEVDLPQREER-SSSASGPTHQ 618
           LL+ER E+HGD EHIIDITRNDDASS SSH D  P ++ PQ EER SSS   PT+Q
Sbjct: 19  LLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQHEERPSSSTQTPTNQ 74


>ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
           gi|223543154|gb|EEF44686.1| ring finger protein,
           putative [Ricinus communis]
          Length = 421

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +1

Query: 454 LLIERMESHGDSEHIIDITRNDDASSHSSHYDQPPEVDLPQREERSSSA 600
           LL+ERM+SH D EHII IT N+D SS+SSH  QPP++DLP  E+RSSSA
Sbjct: 21  LLMERMDSHDDHEHIISITGNEDGSSNSSHNGQPPDIDLPYHEDRSSSA 69


>gb|EMJ16628.1| hypothetical protein PRUPE_ppa006140mg [Prunus persica]
          Length = 425

 Score = 65.5 bits (158), Expect(2) = 1e-09
 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +1

Query: 454 LLIERMESHGDSEHIIDITRNDDASSHSSHYDQPPEVDLPQREER-SSSASGPTHQ 618
           LL+E+MES  D  HIID+TRN D S+ SS  D+PP VDLPQ E+R S+S   PT+Q
Sbjct: 19  LLLEQMESPNDHVHIIDVTRNRDTSASSSSDDRPPRVDLPQHEDRPSASTHAPTYQ 74



 Score = 23.1 bits (48), Expect(2) = 1e-09
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 399 MDAISSEPNSNVLSDQHP 452
           MD    EPNS+  SDQ P
Sbjct: 1   MDVPCPEPNSDAQSDQFP 18


>ref|XP_004302944.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Fragaria
           vesca subsp. vesca]
          Length = 418

 Score = 65.5 bits (158), Expect(2) = 1e-09
 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +1

Query: 454 LLIERMESHGDSEHIIDITRNDDASSHSSHYDQPPEVDLPQREERSSSAS-GPTHQ 618
           LL+E+MES     HIID+TRNDD SS SS+ DQPP V+LPQ E+R S  +  PT+Q
Sbjct: 19  LLLEQMESPNSHVHIIDVTRNDDTSSSSSNDDQPPRVELPQHEDRLSHITHAPTYQ 74



 Score = 23.1 bits (48), Expect(2) = 1e-09
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 399 MDAISSEPNSNVLSDQHP 452
           MD  S EP+S+  SDQ+P
Sbjct: 1   MDVPSPEPHSDSHSDQYP 18


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