BLASTX nr result

ID: Jatropha_contig00037414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037414
         (644 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512588.1| GRIP and coiled-coil domain-containing prote...    74   3e-11
gb|ERP60049.1| hypothetical protein POPTR_0005s00350g [Populus t...    59   1e-06

>ref|XP_002512588.1| GRIP and coiled-coil domain-containing protein, putative [Ricinus
           communis] gi|223548549|gb|EEF50040.1| GRIP and
           coiled-coil domain-containing protein, putative [Ricinus
           communis]
          Length = 799

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +1

Query: 358 MAT-ESAIASLHSPPPTTVTDELIETNVTEEVKPMEQETVSLAKEGKEENFPKAEILPSE 534
           MAT ES+ +SLH+   TT  +E IET V  EVKPMEQETV L+KE KE    + E L SE
Sbjct: 1   MATSESSTSSLHT---TTTPEEPIETKVIGEVKPMEQETVLLSKEVKE---GETEELSSE 54

Query: 535 DKLLGKSEVEAEDKKTEPLAVEVKTSGASVVD 630
            K +   E EAEDK+T+P AVE+K    SVVD
Sbjct: 55  AKQISILEEEAEDKQTKPPAVEMKIEHDSVVD 86


>gb|ERP60049.1| hypothetical protein POPTR_0005s00350g [Populus trichocarpa]
          Length = 757

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 44/96 (45%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = +1

Query: 358 MATESAIASLHSPPPTTVTDELIETNVTEEVKPMEQETVSLAKEGKEENFPKAEILPSED 537
           MATE+A      P   T +D      VTEEVKP+E E VS+AK+ +EE   K   L S+ 
Sbjct: 1   MATETA------PSHQTPSDHEPMEKVTEEVKPVEPEIVSVAKKTEEEEDLKPNELASQS 54

Query: 538 KLLGKSEVEAEDKKTEPLAVEVK-TSGASVVDAVVE 642
             L KSE EAED + EP  VEVK    A +VD  V+
Sbjct: 55  TPLAKSEGEAED-EAEPPTVEVKMIDDAPIVDVPVD 89


Top