BLASTX nr result

ID: Jatropha_contig00037166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037166
         (443 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Ambore...    67   1e-19
gb|ERN04089.1| hypothetical protein AMTR_s05659p00000220 [Ambore...    45   2e-06

>gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 67.4 bits (163), Expect(3) = 1e-19
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -2

Query: 193 PWGRGSPDFHRSLVRPPNEN*GPCAGVSSLRLA 95
           PWGRGSPDFHRSLVRPPNEN GPC G+ SLRLA
Sbjct: 23  PWGRGSPDFHRSLVRPPNENLGPCTGLLSLRLA 55



 Score = 53.5 bits (127), Expect(3) = 1e-19
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = -3

Query: 96  LALYGVPRGSSTSSASRREECHQLGRYWPLTT 1
           LALYGVP G S  SAS R ECHQLGRYWPLTT
Sbjct: 54  LALYGVPHGFS--SASHRGECHQLGRYWPLTT 83



 Score = 20.8 bits (42), Expect(3) = 1e-19
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 209 DTVALPMGTG*P 174
           DT+ALP G G P
Sbjct: 18  DTIALPWGRGSP 29


>gb|ERN04089.1| hypothetical protein AMTR_s05659p00000220 [Amborella trichopoda]
          Length = 102

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 29/58 (50%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 164 MEVGATPSPWATQQCPEGGVRGLIVART-FFLSISRSCEGGQSKIVLFLYKDNRRSQR 334
           MEVGATPSPW          RGLIVART FFL  ++              KDNRRSQR
Sbjct: 1   MEVGATPSPWQRNSVLREEFRGLIVARTSFFLGHAKG--ASPRSYCSSTKKDNRRSQR 56



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 337 RRHYLSGLFQLLHDFVP 387
           RRH LS  FQLLHDFVP
Sbjct: 58  RRHSLSEFFQLLHDFVP 74


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