BLASTX nr result

ID: Jatropha_contig00037072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037072
         (542 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521826.1| axonemal dynein light chain, putative [Ricin...   129   4e-28

>ref|XP_002521826.1| axonemal dynein light chain, putative [Ricinus communis]
           gi|223539039|gb|EEF40636.1| axonemal dynein light chain,
           putative [Ricinus communis]
          Length = 303

 Score =  129 bits (324), Expect = 4e-28
 Identities = 100/220 (45%), Positives = 112/220 (50%), Gaps = 43/220 (19%)
 Frame = +2

Query: 11  MAHHANRRRILXXXXXXXXXXXX---TIKKNHTKPT------RNPDQVIPSKPFYISNPL 163
           MAH    RRIL               T+KK+  KPT      +NPD ++PSKPFY+SNPL
Sbjct: 1   MAHRTTNRRILAASQDSPPNPSAMDPTLKKSTKKPTSAYPPTKNPDHLVPSKPFYMSNPL 60

Query: 164 SKLNPVRKITTITHKPS-------VDTLLQAKAMAVSADFD-GSRLSIVKQ--------- 292
           SKLNPVR+   I  KP+       VDT LQAKAM VSADFD  SRLSI+KQ         
Sbjct: 61  SKLNPVRR---IAQKPTRNYLVDHVDTHLQAKAMTVSADFDSSSRLSIIKQKHQQQLERF 117

Query: 293 ---------QXXXXXXXXXXXXXXXXXXGAVEKKKVQDLVANNGKKKEN-----KDLIEG 430
                    +                  G V KKKVQ+   N  KKK+N     KDLIEG
Sbjct: 118 ESRIEKESIKEATASKDKVKRLLSNKELGVVNKKKVQE---NEKKKKDNRSKEVKDLIEG 174

Query: 431 LDIKRMTVSL---XXXXXXXXXXXXXVELADFLANNGAKI 541
           LDIKRMTVSL                VELADFLANNGAKI
Sbjct: 175 LDIKRMTVSLDGGVGGGRRRSLCGSQVELADFLANNGAKI 214


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