BLASTX nr result

ID: Jatropha_contig00037006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037006
         (629 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|5...    75   1e-11
gb|EEF04617.2| hypothetical protein POPTR_0016s08670g, partial [...    72   2e-10
ref|XP_002322856.1| predicted protein [Populus trichocarpa]            72   2e-10

>ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|550336198|gb|ERP59291.1|
           PWWP domain-containing family protein [Populus
           trichocarpa]
          Length = 918

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
 Frame = +1

Query: 274 NLDRIDLNSDVVSVEPENDVHGF-NIPEPMIMPGL-SNAETLTDP----KGQTLEPVIDQ 435
           NLD IDLNSDV+S EPENDV GF N+ E     GL S+AE L D     +GQ  E VIDQ
Sbjct: 4   NLDSIDLNSDVLSGEPENDVKGFNNVSEVRTKVGLSSDAEALIDSGKNGEGQKQEAVIDQ 63

Query: 436 VKDFEG----AKLTVNGLGNGGLERQSESVDREINMEAKIKSLEEESNTVVDVSSGEVVQ 603
           VKDF+G     ++ V G+G  G   + +S D+ +++E      E  S + VD  S + V+
Sbjct: 64  VKDFKGDYDLKEVAVGGIGREG---KMDSADKSVDLEG-----ENGSGSGVDDGSAQEVE 115

Query: 604 FTKT 615
             +T
Sbjct: 116 VAET 119


>gb|EEF04617.2| hypothetical protein POPTR_0016s08670g, partial [Populus
           trichocarpa]
          Length = 696

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 7/121 (5%)
 Frame = +1

Query: 274 NLDRIDLNSDVVSVEPENDVHGF-NIPEPMIMPGL-SNAETL----TDPKGQTLEPVIDQ 435
           NLD IDLNSDVVS E E+ V+GF N+     M GL S+AETL    T+ +GQ  EPV+D+
Sbjct: 4   NLDSIDLNSDVVSGEREDGVNGFSNVSVVKSMVGLSSDAETLMDSVTNSQGQNQEPVVDE 63

Query: 436 VKDFEGAK-LTVNGLGNGGLERQSESVDREINMEAKIKSLEEESNTVVDVSSGEVVQFTK 612
           VKDF+GA  L    +G  G E + +SV + ++ E +  S     + V D S  E  + T+
Sbjct: 64  VKDFKGANDLKEVAVGGLGWEGKMDSVYKSVDFEGENGS----GSGVGDASVREAAEITE 119

Query: 613 T 615
           T
Sbjct: 120 T 120


>ref|XP_002322856.1| predicted protein [Populus trichocarpa]
          Length = 639

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 7/121 (5%)
 Frame = +1

Query: 274 NLDRIDLNSDVVSVEPENDVHGF-NIPEPMIMPGL-SNAETL----TDPKGQTLEPVIDQ 435
           NLD IDLNSDVVS E E+ V+GF N+     M GL S+AETL    T+ +GQ  EPV+D+
Sbjct: 4   NLDSIDLNSDVVSGEREDGVNGFSNVSVVKSMVGLSSDAETLMDSVTNSQGQNQEPVVDE 63

Query: 436 VKDFEGAK-LTVNGLGNGGLERQSESVDREINMEAKIKSLEEESNTVVDVSSGEVVQFTK 612
           VKDF+GA  L    +G  G E + +SV + ++ E +  S     + V D S  E  + T+
Sbjct: 64  VKDFKGANDLKEVAVGGLGWEGKMDSVYKSVDFEGENGS----GSGVGDASVREAAEITE 119

Query: 613 T 615
           T
Sbjct: 120 T 120


Top