BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00037005
         (611 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   130   4e-28
gb|EEE88785.2| hypothetical protein POPTR_0008s11200g [Populus t...   105   1e-20
gb|ESR51072.1| hypothetical protein CICLE_v10030633mg [Citrus cl...    60   3e-07
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...    56   6e-06
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    56   6e-06

>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
           DNA-directed RNA polymerase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 997

 Score =  130 bits (326), Expect = 4e-28
 Identities = 79/141 (56%), Positives = 92/141 (65%), Gaps = 7/141 (4%)
 Frame = +1

Query: 208 MWRSFARRAS-SAKQQKLSSNLTKPYQASNFIEKIRPLEIPTFFNSPYSPLYFSRMLVLS 384
           MWR+FARR S S+K+   SS+ T+  Q  + ++K+R  E  T   SPYS L   R+  LS
Sbjct: 1   MWRNFARRTSLSSKKLNFSSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISGLS 60

Query: 385 SPSDELSK-SFTNFRNPLGLSPPFLKSYATAAAQSILSTDESDFSGSDELQEQIEEINKH 561
           S + E  K SFTN  NP G S    K YATAAAQ I STDESDFSG DELQEQIEEINKH
Sbjct: 61  SQNHEFIKPSFTNLTNPFGFSHFLFKGYATAAAQVIASTDESDFSGCDELQEQIEEINKH 120

Query: 562 HQKMEMQFRPQQ-----KKTI 609
           H+KM+  FR QQ     KKTI
Sbjct: 121 HKKMDAHFRQQQQQQQRKKTI 141


>gb|EEE88785.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
          Length = 988

 Score =  105 bits (261), Expect = 1e-20
 Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = +1

Query: 208 MWRSFARRASSAKQQKLSSNLTKPYQASNFIEKIRPLEIPTFFNSPYSPLYFSRMLVLSS 387
           MWR+ A+  S +KQ K  SN +  ++ S FIE IR  +     NS +S L  SR + +  
Sbjct: 1   MWRTLAK-CSPSKQLKFPSNSSNFFKDSTFIENIRSPDAKKCLNSAFSFLC-SRQIGVFP 58

Query: 388 PSDEL-SKSFTNFRNPLGLSPPFLKSYATAAAQSIL-STDESDFSGSDELQEQIEEINKH 561
            +D+L + SF +   P  LSP F K YATAAA  ++ S DESD SGSD+ Q  +E++NKH
Sbjct: 59  QNDKLCNSSFGDLTKPFDLSPFFFKGYATAAAADVIPSNDESDLSGSDDFQGLMEQVNKH 118

Query: 562 HQKMEMQFRPQQKKTI 609
            QKME QFRPQ+KK +
Sbjct: 119 FQKMEPQFRPQEKKMV 134


>gb|ESR51072.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
          Length = 980

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = +1

Query: 208 MWRSFARRASSAKQQKLSSNLTKPYQASNFIEKIRPLEIPTFFNSPYSPLYFSRMLVLSS 387
           MWR+ AR+ SS +  K S +  K  Q +NF++KI  LE  T  +S    L F R   LSS
Sbjct: 1   MWRNLARQ-SSTRNFKFSPS--KVSQTTNFLKKITSLETQTLLDSSCPLLGFRRTSFLSS 57

Query: 388 PSDELSKS-FTNFRNPLGLSPPFLKSYATAAAQSILSTDESDFSGSDELQEQIEEINK 558
               L +S FT    P G+     +SYA +AA++I S  ES+ SGS+E+QE I++ N+
Sbjct: 58  QKSNLGQSNFTQSIYPFGVLTS--RSYA-SAAEAIAS--ESELSGSEEVQELIDQFNE 110


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
 Frame = +1

Query: 208 MWRSFARRASSAKQQKLS-SNLTKPY-------QASNFIEKIRPLEIPTFFNSPYSPLYF 363
           MWR+ A++ +S K    S S+   P        Q S+F++K R  E     N+    + F
Sbjct: 1   MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60

Query: 364 SRMLVLSSPSDELSK-SFTNFRNPLGLSP--PFLKSYATAAAQSILSTD-ESDFSGSDEL 531
            ++  ++S  +EL + S  N   P G+S    + K YA+ A ++I STD E D SGS+E+
Sbjct: 61  RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVA-EAIASTDGEEDSSGSEEI 119

Query: 532 QEQIEEINKHHQKMEMQFRPQQKKTI 609
           QE +E++ + +  +E  F+ Q K+ +
Sbjct: 120 QEMLEDLIRENNMVESHFK-QPKRVV 144


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
 Frame = +1

Query: 208 MWRSFARRASSAKQQKL----SSNLTKPYQASNF--------IEKIRPLEIPTFFNSPYS 351
           MWR+ A+RA     +K     S  L++ Y    F        I K    E  +  +S +S
Sbjct: 40  MWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFS 99

Query: 352 PLYFSRMLVLSSPSDELSK-SFTNFRNPLGLSPPFLKSYATAAAQSILSTD-ESDFSGSD 525
            + F R+  +SS  D + + SF   RN +G S    KSYA+ A +++ STD E D S SD
Sbjct: 100 EMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVA-EAVSSTDVEEDVSASD 158

Query: 526 ELQEQIEEINKHHQKMEMQFRPQQK 600
           E+QE + E+ K  +K ++ F+ ++K
Sbjct: 159 EIQELLGEMKK-EEKRQVNFKRREK 182