BLASTX nr result

ID: Jatropha_contig00036871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036871
         (694 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528358.1| conserved hypothetical protein [Ricinus comm...   104   3e-20
gb|EEF01759.2| hypothetical protein POPTR_0010s07650g [Populus t...    96   1e-17
gb|ABK94572.1| unknown [Populus trichocarpa]                           96   1e-17
gb|EOY06175.1| TLD-domain containing nucleolar protein, putative...    57   5e-06
gb|EOY06174.1| TLD-domain containing nucleolar protein, putative...    57   5e-06
gb|EOY06173.1| TLD-domain containing nucleolar protein, putative...    57   5e-06

>ref|XP_002528358.1| conserved hypothetical protein [Ricinus communis]
           gi|223532226|gb|EEF34030.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  104 bits (259), Expect = 3e-20
 Identities = 68/168 (40%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
 Frame = +1

Query: 199 MQSFKDKVSNQLSRLFVXXXXXXXXXXXXXXXXXXXQVRLLSNXXXXXXXXXXXXXXXXX 378
           M S KDKVSNQLSR+F                    Q R  S+                 
Sbjct: 1   MHSLKDKVSNQLSRIFADSPNHNSPSSPPDNS----QARPFSSGGKSFSSYFSFGVPSLN 56

Query: 379 XXXXXXNKHQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTISEDIKFQNSC---ENR 549
                 NK Q DL P QSL VR   KGF+Q+D  +V+YHEC+T+ E+   Q S    +  
Sbjct: 57  FGGSKSNKQQQDLKPLQSLPVRWGSKGFKQQDGYTVKYHECNTLKENENLQLSRTDGKES 116

Query: 550 NTLCAYKQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHLM 693
           + +   K TD  +D NE G S RSS+DS++FEEAR+Q TPR SLP LM
Sbjct: 117 SKISVNKGTDKINDINENGESGRSSSDSDIFEEAREQQTPRSSLPDLM 164


>gb|EEF01759.2| hypothetical protein POPTR_0010s07650g [Populus trichocarpa]
          Length = 332

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 68/168 (40%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +1

Query: 199 MQSFKDKVSNQLSRLFVXXXXXXXXXXXXXXXXXXXQVRLLSNXXXXXXXXXXXXXXXXX 378
           M +FK+KVSNQLSRLF                    Q R  S                  
Sbjct: 1   MSAFKEKVSNQLSRLFAGSPNSSSPDNS--------QARPCSKGEKSSSYFPFAIPSLSF 52

Query: 379 XXXXXXNKHQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTISEDIKFQNSCEN---R 549
                 NKHQ +L P QSL VR   K  EQ++E S RYHECSTI E  +FQ SC++    
Sbjct: 53  VGSRS-NKHQDELKPIQSLPVRWNGKDLEQREEYSDRYHECSTICETEEFQKSCKDDKEY 111

Query: 550 NTLCAYKQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHLM 693
           N      QT  +HD N+     RSS+DS++FEEA +Q TPRK  P LM
Sbjct: 112 NAAFENNQTVKSHDGNDDAAPARSSSDSDLFEEANNQ-TPRKPFPCLM 158


>gb|ABK94572.1| unknown [Populus trichocarpa]
          Length = 193

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 68/168 (40%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +1

Query: 199 MQSFKDKVSNQLSRLFVXXXXXXXXXXXXXXXXXXXQVRLLSNXXXXXXXXXXXXXXXXX 378
           M +FK+KVSNQLSRLF                    Q R  S                  
Sbjct: 1   MSAFKEKVSNQLSRLFAGSPNSSSPDNS--------QARPCSKGEKSSSYFPFAIPSLSF 52

Query: 379 XXXXXXNKHQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTISEDIKFQNSCEN---R 549
                 NKHQ +L P QSL VR   K  EQ++E S RYHECSTI E  +FQ SC++    
Sbjct: 53  VGSRS-NKHQDELKPIQSLPVRWNGKDLEQREEYSDRYHECSTICETEEFQKSCKDDKEY 111

Query: 550 NTLCAYKQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHLM 693
           N      QT  +HD N+     RSS+DS++FEEA +Q TPRK  P LM
Sbjct: 112 NAAFENNQTVKSHDGNDDAAPARSSSDSDLFEEANNQ-TPRKPFPCLM 158


>gb|EOY06175.1| TLD-domain containing nucleolar protein, putative isoform 3
           [Theobroma cacao]
          Length = 296

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
 Frame = +1

Query: 403 HQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTI--SEDIKFQNSCENRNTLCA---Y 567
           + HDL P QS  VR   K FE +D+   R  E + I  SEDIK    C+++ +       
Sbjct: 63  NDHDLKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIK--KVCQDKKSNWTDNDI 120

Query: 568 KQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHL 690
           KQT       +   SERSS+DS+ F+EAR+Q +P KS P+L
Sbjct: 121 KQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVKSSPNL 161


>gb|EOY06174.1| TLD-domain containing nucleolar protein, putative isoform 2
           [Theobroma cacao]
          Length = 353

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
 Frame = +1

Query: 403 HQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTI--SEDIKFQNSCENRNTLCA---Y 567
           + HDL P QS  VR   K FE +D+   R  E + I  SEDIK    C+++ +       
Sbjct: 63  NDHDLKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIK--KVCQDKKSNWTDNDI 120

Query: 568 KQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHL 690
           KQT       +   SERSS+DS+ F+EAR+Q +P KS P+L
Sbjct: 121 KQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVKSSPNL 161


>gb|EOY06173.1| TLD-domain containing nucleolar protein, putative isoform 1
           [Theobroma cacao]
          Length = 335

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
 Frame = +1

Query: 403 HQHDLNPSQSLSVRGVRKGFEQKDECSVRYHECSTI--SEDIKFQNSCENRNTLCA---Y 567
           + HDL P QS  VR   K FE +D+   R  E + I  SEDIK    C+++ +       
Sbjct: 63  NDHDLKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIK--KVCQDKKSNWTDNDI 120

Query: 568 KQTDITHDSNEVGLSERSSTDSEVFEEARDQPTPRKSLPHL 690
           KQT       +   SERSS+DS+ F+EAR+Q +P KS P+L
Sbjct: 121 KQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVKSSPNL 161


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