BLASTX nr result
ID: Jatropha_contig00036614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036614
(630 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513526.1| nucleic acid binding protein, putative [Rici... 110 4e-22
gb|EEE83098.2| RNA recognition motif-containing family protein [... 95 2e-17
ref|XP_002298293.1| predicted protein [Populus trichocarpa] 95 2e-17
gb|EEE87309.2| hypothetical protein POPTR_0009s05510g [Populus t... 94 4e-17
gb|EMJ12564.1| hypothetical protein PRUPE_ppa002383mg [Prunus pe... 89 7e-16
ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 85 1e-14
ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin... 85 1e-14
gb|EOY32752.1| Nucleic acid binding protein, putative isoform 2 ... 82 1e-13
gb|EOY32751.1| Nucleic acid binding protein, putative isoform 1 ... 82 1e-13
gb|EEE87307.2| hypothetical protein POPTR_0009s05520g, partial [... 80 3e-13
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 80 4e-13
ref|XP_002313352.1| predicted protein [Populus trichocarpa] 79 1e-12
gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus pe... 78 2e-12
ref|XP_004293162.1| PREDICTED: zinc finger CCCH domain-containin... 76 6e-12
gb|EEE83097.2| hypothetical protein POPTR_0001s26250g [Populus t... 74 2e-11
gb|ERP63814.1| hypothetical protein POPTR_0003s20310g [Populus t... 74 2e-11
gb|EEE78877.2| hypothetical protein POPTR_0003s20310g [Populus t... 74 2e-11
gb|ERP63813.1| hypothetical protein POPTR_0003s20310g [Populus t... 74 2e-11
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002298292.1| predicted protein [Populus trichocarpa] 74 2e-11
>ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 686
Score = 110 bits (274), Expect = 4e-22
Identities = 66/121 (54%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD EATNIL SKI ++DPENA KIMGYILIQ L++ DL SLAFGSE+L +VIIKAKT
Sbjct: 1 MDTYEATNILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPF---SQSGSRVSS-FVDFAKNPSPHSWP 619
LG H PF S S RV + FVDFAK+PSPHSWP
Sbjct: 61 LGL-STNTLTTPSSPLPSPLNPISRPANNHSPFSTQSSSSPRVGTPFVDFAKSPSPHSWP 119
Query: 620 A 622
A
Sbjct: 120 A 120
>gb|EEE83098.2| RNA recognition motif-containing family protein [Populus
trichocarpa]
Length = 674
Score = 94.7 bits (234), Expect = 2e-17
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD E TNIL +K+ +LDPENA +IMG+ILIQ ++KDL LAFG E+L Q+V+ KAK
Sbjct: 1 MDTHEITNILLTKLKSLDPENASRIMGFILIQDPTEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRVS---SFVDFAKNPSPHSW 616
LG +PF QS R++ SF+DF+KNPSP+ W
Sbjct: 61 LGLSTNTLSTPSTPSSPSPLNPIARPCNNTNPFPQSSPRITNNGSFLDFSKNPSPNPW 118
>ref|XP_002298293.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 94.7 bits (234), Expect = 2e-17
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD E TNIL +K+ +LDPENA +IMG+ILIQ ++KDL LAFG E+L Q+V+ KAK
Sbjct: 1 MDTHEITNILLTKLKSLDPENASRIMGFILIQDPTEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRVS---SFVDFAKNPSPHSW 616
LG +PF QS R++ SF+DF+KNPSP+ W
Sbjct: 61 LGLSTNTLSTPSTPSSPSPLNPIARPCNNTNPFPQSSPRITNNGSFLDFSKNPSPNPW 118
>gb|EEE87309.2| hypothetical protein POPTR_0009s05510g [Populus trichocarpa]
Length = 662
Score = 93.6 bits (231), Expect = 4e-17
Identities = 53/119 (44%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD E TNIL +K+ +LDPENA +IMG+ILIQ S+KDL LAFG E+L Q+V+ KAK
Sbjct: 1 MDTHEITNILLTKLKSLDPENAARIMGFILIQVPSEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRVS---SFVDFAKNPSPHSWP 619
G +PFS S RV+ SF+DF KNP P+ WP
Sbjct: 61 FGLSTNTFSTPSTPSSPLPLNPIARPCNSTNPFSLSSPRVTNNDSFLDFGKNPPPNPWP 119
>gb|EMJ12564.1| hypothetical protein PRUPE_ppa002383mg [Prunus persica]
Length = 678
Score = 89.4 bits (220), Expect = 7e-16
Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
M + E TNIL++KI LDPENA KIMGY+LIQ L++KDL LA+G E+L S+I++AK Q
Sbjct: 1 MGSYEVTNILFTKIKALDPENAIKIMGYLLIQDLAEKDLIRLAYGPETLLHSLIVRAKIQ 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRVSSFVDFAKNP---SPHSWP 619
LG +PFSQS R+ + DF KNP S ++WP
Sbjct: 61 LGLCSSTSTTSSTPSSPSPLNPIARPTNA-NPFSQSSPRIPNGFDFGKNPSSTSSNAWP 118
>ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 46-like [Cucumis sativus]
Length = 675
Score = 85.1 bits (209), Expect = 1e-14
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT ++++KI NL+PENA KIMG++LIQ L DK+L LAFG E+L S+I+KAK
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRV-SSFVDFAKNPSPHS 613
LGF +PFSQS R+ ++ D KNPS S
Sbjct: 61 LGF---PLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPS 112
>ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 675
Score = 85.1 bits (209), Expect = 1e-14
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT ++++KI NL+PENA KIMG++LIQ L DK+L LAFG E+L S+I+KAK
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 452 LGFXXXXXXXXXXXXXXXXXXXXXXXXXXHDPFSQSGSRV-SSFVDFAKNPSPHS 613
LGF +PFSQS R+ ++ D KNPS S
Sbjct: 61 LGF---PLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPS 112
>gb|EOY32752.1| Nucleic acid binding protein, putative isoform 2 [Theobroma cacao]
Length = 640
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD + TN+L+ KI +LDPENA KIMGYILIQ L+D+DL LAFG E+L QS++ KAKT
Sbjct: 1 MDPCDITNVLFCKIKSLDPENASKIMGYILIQDLADRDLMRLAFGPETLLQSLVFKAKTH 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>gb|EOY32751.1| Nucleic acid binding protein, putative isoform 1 [Theobroma cacao]
Length = 634
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD + TN+L+ KI +LDPENA KIMGYILIQ L+D+DL LAFG E+L QS++ KAKT
Sbjct: 1 MDPCDITNVLFCKIKSLDPENASKIMGYILIQDLADRDLMRLAFGPETLLQSLVFKAKTH 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>gb|EEE87307.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa]
Length = 728
Score = 80.5 bits (197), Expect = 3e-13
Identities = 37/64 (57%), Positives = 53/64 (82%)
Frame = +2
Query: 269 TMDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKT 448
TMD+ EATNI++S+I +L+PENA KIMGY+L+Q +K++ LAFG E+L Q++I++ KT
Sbjct: 43 TMDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKT 102
Query: 449 QLGF 460
QLGF
Sbjct: 103 QLGF 106
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 80.1 bits (196), Expect = 4e-13
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EAT I++S+I NLDPENA KIMGY+LIQ +K++ LAFG E+L S+I+KAKT
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTH 60
Query: 452 LGF 460
LGF
Sbjct: 61 LGF 63
>ref|XP_002313352.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 78.6 bits (192), Expect = 1e-12
Identities = 36/63 (57%), Positives = 52/63 (82%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EATNI++S+I +L+PENA KIMGY+L+Q +K++ LAFG E+L Q++I++ KTQ
Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60
Query: 452 LGF 460
LGF
Sbjct: 61 LGF 63
>gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus persica]
Length = 675
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EAT I++S+I NLDPENA KIMG++LIQ DK++ LAFG E+L ++II AKTQ
Sbjct: 1 MDSYEATKIVYSRIQNLDPENASKIMGFLLIQDHGDKEMIRLAFGPETLLHNLIINAKTQ 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>ref|XP_004293162.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Fragaria vesca subsp. vesca]
Length = 614
Score = 76.3 bits (186), Expect = 6e-12
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EAT I++S+I NLD ENA KIMGY+LIQ S+K++ LAFG E+L ++II AKTQ
Sbjct: 1 MDSYEATKIVFSRIQNLDSENASKIMGYLLIQDQSEKEMIRLAFGPETLLHNLIINAKTQ 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>gb|EEE83097.2| hypothetical protein POPTR_0001s26250g [Populus trichocarpa]
Length = 636
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EA N+++S+I NL+PENA KIMGY+L+Q +K++ AFG E+L ++I+ AKTQ
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 452 LGF 460
LGF
Sbjct: 61 LGF 63
>gb|ERP63814.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
Length = 682
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT I++S+I NLDPENA KIMG +LIQ +K++ LAFG E+L SVI+KA+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>gb|EEE78877.2| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
Length = 705
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT I++S+I NLDPENA KIMG +LIQ +K++ LAFG E+L SVI+KA+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>gb|ERP63813.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
Length = 623
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT I++S+I NLDPENA KIMG +LIQ +K++ LAFG E+L SVI+KA+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MDA EAT I++S+I NLDPENA KIMG +LIQ +K++ LAFG E+L SVI+KA+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 452 LG 457
LG
Sbjct: 61 LG 62
>ref|XP_002298292.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +2
Query: 272 MDASEATNILWSKITNLDPENAYKIMGYILIQGLSDKDLFSLAFGSESLSQSVIIKAKTQ 451
MD+ EA N+++S+I NL+PENA KIMGY+L+Q +K++ AFG E+L ++I+ AKTQ
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 452 LGF 460
LGF
Sbjct: 61 LGF 63